Cuculus canorus (common cuckoo): 104058085
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Entry
104058085 CDS
T08597
Symbol
PKD2
Name
(RefSeq) LOW QUALITY PROTEIN: polycystin-2
KO
K04986
polycystin 2
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cuca03037
]
104058085 (PKD2)
04040 Ion channels [BR:
cuca04040
]
104058085 (PKD2)
Cilium and associated proteins [BR:
cuca03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104058085 (PKD2)
Ion channels [BR:
cuca04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104058085 (PKD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
YVC1_C
Fer4_24
EF-hand_1
SU10_portal
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
104058085
NCBI-ProteinID:
XP_053920597
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All DBs
Position
4
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AA seq
868 aa
AA seq
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MSGRGGRGREQLELGRLGEGSCPPSPPPSACSRQAWSRDNPGFEPEEETTAMDAEWGGGA
GRQRRGRGGAGAPGGAAGPPEGSAPRAAWGKRLARQLRGLWGTRLMEESNISRERYLKSV
LRELVTYMIFLVVLCVLTYGTVSSNMYYYTKVMSQLFLETPISKMEKTDFKTLSTMDDFW
KFAEGPLLDGLYWDIWLHNETMAENKSFIYYENLLLGXPRIRQLKVRNGSCSIPEDLKDE
IKDCYDVYSVANEDTAPFGLRNGTAWTYTSEKDLNGSSHWGLIATYSGAGYYQDLSRTRE
VTAVQIASLKNNLWLDRGTRAAFIDFSVYNANINLFCVVRLLVEFPATGGLVTSWQFQPV
RLIHYISTFDFFLAACEMVFCLFVLYYTVEEILEIHIHRLRYFRSLWNCLDIFIIVLSVA
AIGISIYRTSTVDMLLKKLLEDQNSFPNFEPLAYWQVQFNNIAAVTVFFVWIKLFKFVNF
NRTMSQLSTTMSRCVKDVIGFTIMCFIIFLAYAQLAYLVFGTQIDDFSTFQGCIFTQFRI
ILGDFNFTEVEEANRILGPIYFTTLVFFMFFILLNMFLAIINDTYSEVKSDMAQQKVEME
LSDLIKKGYNKAMIKLKLKKTTVDDISESLRQSGGKLNFDELRQDLKGKGHTDAEIEAIF
TKYDQDGDQELTEHEHQQMRDDLEKEREDLDLDRSSLPRPLSSRSFPRSLDDSEEDEDED
SGHSSRRRGSSSSGVSYEEFQVLMRRVDRMEHSIGSIVSKIDAVIVKLEAMERAKLKRRD
VLGRLLDGVTEDERLGRDNEVHREQMERLVREELERWESDDTASQMSHRLGTPLGLNGQP
RSRNSRPSSSQSDGIDGGGGNAGNNVHV
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcgcgggggccgcggccgggagcagctggagctggggcggctgggcgagggg
tcctgcccgccgtccccgccgccctccgcctgctcgcggcaggcctggagccgggacaac
ccgggcttcgagcccgaggaggagacgacggcgatggacgcggagtggggcggcggcgcg
gggcggcagcggcgggggcgcggcggggcgggggcgccggggggagccgcggggccgccc
gagggcagcgcgccccgcgccgcctggggaaagcgcctggcgcggcagctgcgaggtctg
tgggggacgaggctcatggaagaaagtaacatcagcagagagcgatacctgaaaagtgtt
ttacgggagttggttacgtacatgattttccttgtggtcttatgtgtcttgacttatggg
acagtgagttccaatatgtactattacacaaaagttatgtctcagctcttcctggaaaca
cctatatcaaaaatggagaaaactgatttcaaaactttgtccacaatggatgacttctgg
aagtttgcagagggccctttgctggatggtctttactgggacatatggttacacaacgaa
accatggcagaaaacaaaagcttcatttattatgagaacctgctcctagggntgccacgc
attcggcagctgaaagtgagaaatggttcatgctcaataccagaagatttaaaggatgaa
atcaaagactgctatgatgtctactctgtagctaatgaagatactgctccttttgggctc
cgaaatggaacagcttggacgtacaccagtgagaaggatttgaatgggagcagccactgg
ggcttgattgccacatacagtggagctggttattaccaagacctctcgaggaccagagaa
gtgacagctgtgcagattgctagccttaagaacaacctctggctggacagagggaccaga
gcggctttcattgatttctcagtatacaatgcaaacatcaacctattctgtgttgtcagg
ttgttagttgagtttccagcgactggaggccttgttacctcttggcagtttcagcccgtg
aggttgattcactacatctccacttttgattttttcttggcagcctgtgaaatggtattc
tgtctttttgttctttattacacggtggaagagatcttagaaattcacattcataggctg
cgctacttcagaagtctctggaattgccttgatatttttatcattgtgctctctgtggca
gctatagggattagtatctataggacatcaactgttgatatgctcctgaaaaagctgctg
gaagatcagaactcgtttcccaattttgaacctttggcatattggcaagtgcaattcaac
aacattgctgcagttactgtgttttttgtctggattaagcttttcaaatttgttaatttc
aacagaaccatgagtcagctgtccactaccatgtctcgctgtgtcaaagatgtcattggc
ttcactattatgtgctttattattttcttagcgtatgctcagttggcttatcttgtcttt
ggcactcaaattgatgacttcagcactttccagggctgcatatttactcagttccgcatc
attttgggagacttcaacttcacagaggttgaagaagctaatcgaattttgggaccaatt
tatttcaccacacttgtgttctttatgttcttcattcttttgaacatgtttctggccatt
atcaatgatacatactctgaagtcaaatcagatatggcacaacagaaggtggaaatggaa
ctgtctgaccttatcaaaaagggttacaataaagccatgatcaaacttaaattgaagaaa
actactgttgatgatatttcagaaagtctgagacaaagtgggggaaaactaaattttgat
gaactccgacaagatctaaaagggaagggacacacggatgcagagattgaagcaatattt
accaaatatgaccaggatggggaccaggaattgacagagcatgaacatcagcagatgaga
gatgacctggagaaagagcgggaggatctggacctggacaggagctcattgccacgccct
ctaagcagccgaagctttcctcggagcttggatgactccgaggaggatgaggatgaagac
agtggacacagttccaggaggaggggcagcagctctagtggggtttcctacgaagaattc
caagtactcatgaggcgggtcgatcgcatggagcattctattggcagtattgtctccaag
attgatgctgttattgtgaagcttgaagcgatggagagagccaaactgaaaaggagagat
gtgttgggaaggctgttggatggagtcacagaggatgaaagactgggtcgtgataatgaa
gtccacagggaacaaatggagcggcttgtgcgagaagagttggagcggtgggaatcggat
gacacggcatcccaaatgagccatcgtctgggaacaccgcttggactgaacggccagcct
cgttcgaggaactctcggccatcttcctcccagtcagatggtattgatgggggaggagga
aatgcagggaataacgtccatgtgtag
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