Cuculus canorus (common cuckoo): 104058203
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Entry
104058203 CDS
T08597
Symbol
HNRNPU
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104058203 (HNRNPU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
104058203 (HNRNPU)
Spliceosome [BR:
cuca03041
]
Common components
Common spliceosomal components
hnRNP proteins
104058203 (HNRNPU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
SRP54
Motif
Other DBs
NCBI-GeneID:
104058203
NCBI-ProteinID:
XP_053918245
LinkDB
All DBs
Position
3:110091489..110105225
Genome browser
AA seq
828 aa
AA seq
DB search
MSCSPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDQEEAGGGGSGAEPGNGS
VEGEAAESGGGAAQLRQGGVPGQAAASAADDDDEEGLEAADGDAMELGEENGERAAAGGG
PAEEEAGGEEEEEEEEEDENGDDQGFQEGEDELADEDEAGDANGHGEQRPPQPPQQPPPL
LPPRGAAKEAPAKSAASASGPAAASAQAGPAKQQQQQKKAEGGGRPGAQGAGGDAKTEQK
PGEKKRGVKRPREDHGRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLH
FKISRDRFSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVKHLYTKDIDIHE
VRVGWSLNTSGMLLGEEEFSYGYSLKGIKTCNCETEDFGEKFDENDVIGCFANFDGDEVE
LSYSKNGQELGVAFKISKEVLDGRPLFPHVLCHNCAVEFNFGQKEEPYFPVPEEYTFIQK
VPLEDRVRGPKGPEQKKDCEVVMMIGLPGAGKTTWVTKHAAANPGKYNILGTNTIMDKMM
VAGFKRQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAG
FQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLPEVAECFDEIIYVELQ
KEEAQKLLEQYKEESKKALPPEKKQNTGSKKNKKSNKNQYNRGQRGRGGFNMRGNFRGGV
PGNRGGYNRRGGNMPQRGGGGGGGGGGSSGAIGYPYPRGPVFPSRGGYSNRGNYNRGGMP
NRGNYNQNFRGRGNNRGYKNQSQGYNQWQQGQFWGQKPWSQHYHQGYY
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgagctgctcgcccgtgaacgtgaagaagctgaaggtgtcggagctaaaggaggagctg
aaaaagcgacgtctctccgacaagggcctcaaggccgagctgatggagcggctccaggcc
gcgctggaccaggaggaggccggcggcggcggcagcggcgccgagcccgggaacggcagc
gtggagggggaggcggccgagagtggcggaggcgccgcgcagctccgccaggggggggtg
ccggggcaggccgcggcctccgcggcggacgacgacgacgaggaaggtctggaggcggcc
gacggcgacgccatggagctgggcgaggagaacggcgagcgggcggcggccgggggcggc
cccgccgaggaggaggcgggcggcgaggaggaggaagaggaggaggaggaggatgagaac
ggagacgaccagggcttccaagagggggaggacgagctcgccgacgaggacgaggccggc
gacgccaacgggcatggcgagcagcggccgccgcagcccccgcagcagcctccgccgctc
ctcccgccgcgcggcgccgccaaggaggcccccgccaaaagcgcggccagcgcctcgggg
cccgcggcggcctcggcacaggcggggcccgccaagcagcagcagcagcagaagaaagcg
gaaggtggcggccgccccggggctcagggcgccgggggagatgctaaaacagaacaaaaa
cctggtgagaagaagaggggagtgaagagaccacgtgaagaccatggccgtggatatttt
gaatacattgaagaaaataagtacagcagggccaagtcccctcaaccacccgtggaagaa
gaagatgaacattttgatgacaccgtggtttgtcttgatacttataactgtgacctgcat
tttaaaatctcaagagaccgatttagtgcttcctctctgaccatggaaagctttgctttc
ctttgggctggagggagagcctcctatggagtttctaaaggcaaagtctgctttgagatg
aaggttacagaaaagattcctgttaaacacctgtatacaaaagatattgatatacatgaa
gtgcgagttggctggtcgctgaacacaagtggaatgttacttggtgaagaagaattttct
tacgggtattctctgaaaggaataaagacttgcaattgtgagactgaagactttggtgag
aagtttgatgaaaacgatgtgattggatgttttgctaattttgatggagatgaagtggaa
ctctcgtattccaagaatggacaagagcttggtgttgcgttcaaaataagcaaagaagtt
cttgatgggcggccgctcttcccgcatgttctctgccataactgtgcagtcgagttcaac
tttggtcagaaggaggaaccctactttcctgtacctgaagagtacaccttcatccagaag
gtccccctggaagatagggtccgaggaccaaagggacctgagcaaaagaaagattgtgag
gtggtgatgatgattggcttgcctggagctggcaagactacatgggttaccaaacatgca
gcagcaaatcctgggaaatacaacattcttggcacaaataccattatggacaaaatgatg
gttgcaggttttaagcggcagatggcggacactggaaaactaaacacactgttgcagaga
gctccacagtgtcttggaaagttcattgagattgcagctcgtaagaagcggaatttcatt
ttggatcagacaaatgtgtctgcagctgcgcagaggagaaaaatgtgcctgtttgcaggc
ttccagcgcaaagcagttgttgtttgcccaaaagatgaagactacaagcaaagaacacaa
aagaaggcagaggtggagggaaaagatcttccagagcatgcagttctcaaaatgaaaggg
aacttcacactgccagaggtagcagaatgttttgatgaaataatctatgtagagctgcaa
aaagaagaagctcagaagcttttggaacaatataaagaagaaagtaagaaagctcttcca
ccagaaaagaaacagaacactggctcaaagaaaaacaagaagagcaataaaaatcagtac
aataggggtcagagaggacgtggaggattcaacatgcgaggcaacttcagaggaggagtc
cctggcaatcgtggtggatacaacaggaggggaggcaacatgccccagcgaggtggtgga
ggtggtggtggtggcggtggcagcagtggtgccattgggtacccgtaccctcgtggccct
gtctttccaagcagaggtggctactcaaacagaggaaactataacagaggtggaatgccc
aacagggggaactacaaccagaacttcagaggaaggggaaataatcgtggctacaaaaac
caatctcagggctacaaccagtggcagcagggtcaattctggggtcagaagccatggagt
cagcattatcaccaaggatattattga
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