Cuculus canorus (common cuckoo): 104058211
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Entry
104058211 CDS
T08597
Symbol
XPO5
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104058211 (XPO5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuca03016
]
104058211 (XPO5)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104058211 (XPO5)
Transfer RNA biogenesis [BR:
cuca03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
104058211 (XPO5)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
104058211 (XPO5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
104058211
NCBI-ProteinID:
XP_053918374
LinkDB
All DBs
Position
3:complement(109121467..109152675)
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AA seq
1219 aa
AA seq
DB search
MSAEQVSSLCEQLVKAVTVIMDPASTQRYRLEALKFCEEFKEKCPICVPCGLKLAEKTQT
AIVRHFGLQILEHVVKFRWNNMPRLEKVYLKNNVMGLISSGTLSILEEESHIKDVLSRIV
VEMIKREWPQHWPDMLKELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPTQRRRDIQQ
TLTQNMEKIFSFLLTALQQNVNKYRRMVGAPQEQDALNTPQKADLAQEPKAQANCRVGIA
ALNTLAGYIDWVALSHITADNCKLLETLCLLLNEPELQIGAAECLLIAVSRKGKLEDRKP
LMVLFGDVAMHYILTAAQTADGGGLVEKHYVFLKRLCQVLCALGSQLCALLGSDSDVETP
ANFGKYLDSFLAFTTHPSQFLRSSTQITWGALFRHEILSRDPLLLAMIPKYLRASMTNLV
KVGFPSKTDSASCEYSRFDFDSDEDFNAFFNSFRAQQGEVMRMACRLDPRTGFQMAGEWL
RYQLTAPVDPGPMNSKTGEGLCSVFSPSFVQWDAMTFFSESVISQMFRTLDKDEIPVNDG
IDLLQLVLNFETKDPLILSCVLTNVSALFPFVTYRPEYLQQVLSKLFASVTFEVVEESKF
VMSVQAPRTRAVKNVRRHACSSIIKMCRDYPQLVLPNFDMLYNHVKQLLSNELLLTQMEK
CALMEALVLISNQFKDYERQKAFLEELMAPVAGLWLSPEMQRVLSDPEAFISYVGADNKI
ADPGLEDPSGLNRSRISFCVYTILGVVKRARWPAAAEEAKAGGFLVGYMPSGTPMYRNPC
TEQVLKLLDNLLALIRTHNNLYTPEMVARLGETFAKALDMLEVEKNAILGLPQPLLELYD
SPVYKTVLERMQGFFCTLYDNCFHILGNAGPSMQQDFYTVDSLATQLLSSAFINLNNIPD
YRLRPMLRVFVKPLVLSCPPEYYETLVCPMLGPLFTYLHVRLSQKWQVINQRSMLCEDDA
VDDNPESQEMLEEQLVRLLTREVMDLITVCCVSKKGVEHNTTAAVDADDDEAMATEVTPP
ASAELTELGKCLMKQEDVCTALLITAYISLSWKDTLSCQRTTTQLCWPLLKQVLPGNLLP
DAVSWFFISVLNGLQIHGQHDGCMAALVHLAFQIYEALRPRYAELKAVMEQVPEIQRDSL
EQFDSKLLNPTLQKVADKRRKDHFKRLIAGCIGKSLGEQFRKEVHIRNLPSLFKKVKPSL
EADVLENEDGEGLTALFEP
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgagcaggtgagcagcctctgcgagcagctggtgaaggcggtgaccgtgatc
atggacccggcctccacgcagcgctaccgcctggaggcgctcaagttctgtgaggagttc
aaggagaagtgtcccatctgtgtgccctgcgggctgaagctagcagagaagacgcagaca
gccatcgtccggcactttggcctgcagatcctggagcatgtggtcaagttccgctggaac
aatatgcctcgcctagaaaaagtttatctaaagaacaatgtcatgggcctcatatccagt
ggaactctaagtattctagaggaggaaagtcacattaaggacgttctgtctcgcattgtg
gtggagatgatcaaacgcgaatggcctcagcactggcctgacatgctaaaggagctggat
accctctccaagcaaggggaaactcagacagaactggtgatgttcatcctcctacgtttg
gcagaggatgtggtgacttttcaaactctccctacccagcggcgacgagatatccagcaa
accctcacccagaacatggagaagatcttcagcttcttactaactgccttgcaacagaac
gtcaacaagtacagacgcatggttggagcaccccaggaacaagacgccctcaacactcca
cagaaggctgatctggctcaggagccaaaggcacaggcaaactgccgcgtggggatagca
gcactcaacaccttggctggctacattgactgggtggccctgagccacatcacagcagac
aactgcaagcttttggagacgttgtgtctgctcctaaatgaacctgagctccagatagga
gcagcagagtgtctactgattgctgtcagtaggaaaggtaagctggaggatcggaagcct
ctgatggtcttgtttggagacgttgccatgcactacattctgactgctgcacagacagca
gatggaggaggcctagtggagaagcactatgttttcttgaagagactttgccaagttttg
tgcgctttgggcagccagctatgtgcattgctaggctcagattctgatgtggaaacacca
gccaactttggaaaataccttgactcatttttagccttcacaacccatcccagccagttt
ctgcgctcgtccacccagatcacgtggggagccctctttcgacatgaaattctgtctcgc
gaccccttgttgctggctatgattcccaagtatctccgtgcatctatgaccaacctagtg
aaggtgggctttccctctaaaacagacagcgccagctgtgaatactcccgctttgatttt
gacagtgatgaggacttcaatgccttcttcaactctttccgagcccagcaaggagaggtg
atgaggatggcttgtcgtctagaccctcgaactggcttccaaatggctggagaatggctg
aggtaccagctcacagcgcctgttgatcctggacccatgaactctaagacgggcgaaggt
ctctgttccgtcttctctccatcctttgtgcagtgggatgccatgaccttcttctcggag
agcgtcatcagccagatgtttcgaaccttggataaagatgaaatcccagtgaatgatggc
atagatctgctgcagcttgttcttaattttgaaacaaaggatcctctcatcctgtcctgt
gtgctcaccaatgtctctgcgctcttcccgtttgtaacttaccgaccagaatacctacag
caagtactttccaagctgtttgcttcagttacctttgaagttgtagaagaaagtaagttt
gttatgtctgtccaggctcctagaactcgagcagtgaagaatgtgagaaggcatgcgtgc
tcctcaatcataaagatgtgtcgggattaccctcagcttgtcctgccaaactttgatatg
ctgtacaaccatgtgaagcagctgctttcgaatgaactacttctgacgcagatggagaag
tgtgctcttatggaggccctcgtcctcatcagcaaccagttcaaggactatgagcggcaa
aaagctttcctggaggagctcatggctcccgttgctggcttatggctctccccagagatg
cagagagtcctctcagatcctgaagcctttatctcctatgtgggtgcagacaacaaaatt
gctgatccaggcttggaagatcctagtggcctgaaccgctctagaataagtttttgtgtg
tacaccattctgggagttgtgaaacgagctcggtggcctgctgctgcggaagaggcgaaa
gctggaggattcttggtgggatacatgcccagtggaactccaatgtaccgtaatccctgc
actgagcaggtcctgaagcttcttgacaatttacttgctcttataaggactcacaacaat
ctctacacaccagagatggtggctaggctgggggaaacatttgcaaaggccttagacatg
ctggaggttgagaagaatgccatcctaggtctccctcagcctctgctggagctttatgat
tctcctgtttacaaaacggtcttagaaaggatgcagggcttcttttgtaccctctacgac
aactgtttccacatcttgggaaatgcaggcccttccatgcaacaggatttctacacagtt
gacagtcttgccacccagctcctcagctcagctttcatcaacctcaacaacattcctgat
tacagactgcgtcccatgctccgtgtgtttgtgaagcccttggtactctcctgccctcca
gaatactatgaaactcttgtctgccccatgctgggaccactctttacctacctacacgtg
aggttgtctcagaaatggcaagtgatcaaccagcgaagcatgctctgtgaggatgatgct
gtagatgacaaccctgagtctcaggagatgcttgaggaacagctggtgaggctgctgacc
cgagaagtcatggatcttatcactgtttgctgtgtttctaagaaaggcgttgaacataac
actactgctgctgtagatgcagatgatgatgaggcgatggccacggaggtgactccccct
gccagcgcggagctcactgagctcgggaagtgtctgatgaagcaggaggatgtttgcact
gcactgctgatcactgcctacatatccctctcctggaaggacaccttgtcctgccaaaga
accacaacacagctttgctggccgctgctcaaacaggtgcttccaggaaaccttctgcct
gatgctgtgtcctggtttttcataagtgtgctgaatggattacagatacatgggcagcac
gatggctgcatggcagctcttgtccacctggctttccagatctacgaggccctgcgccct
cgctacgctgagctgaaggcagtgatggagcaggtcccagagatccagagggactctttg
gagcagtttgattcaaagcttctcaacccaacactgcagaaggtggcagacaagcgtcgg
aaggatcatttcaagcgccttattgcaggttgcattgggaagtccctcggagagcagttt
cgcaaggaagttcatatccggaacctcccttcgctcttcaaaaaggtgaagccatcattg
gaggcagatgtgctagaaaatgaggatggagagggcctcactgcgctctttgagccctga
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integrated database retrieval system