Cuculus canorus (common cuckoo): 104058215
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Entry
104058215 CDS
T08597
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04517
IgSF CAM signaling
cuca04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104058215
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104058215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cuca04812
]
104058215
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104058215
Intermediate filaments
Intermediate filament-binding proteins
104058215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
Motif
Other DBs
NCBI-GeneID:
104058215
NCBI-ProteinID:
XP_053908842
LinkDB
All DBs
Position
37
Genome browser
AA seq
2450 aa
AA seq
DB search
MAAELDNPDPQNNNNNGPWEGGDARGWDDTTATAKLFECSRIKALADERDAVQKKTFTKW
VNSHLARVSCRIGDLYADLRDGFILTRLLEVLSGEQLPKPTRGRMRIHSLENVDKALQFL
KEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIKTEDNRETRSAKDALLLWC
QMKTSGYPEVNIQNFTTSWRDGLAFNALIHKHRPDLVDFHKLTKSNATYNLHTAFNTAEQ
HLGLSKLLDPEDVNMEDPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQAMEIEAI
IARYEALAADLLAWIHHTITIISNQKFANSLTGVQQQLQAFTAFCTLEKPIKFQEKGNLE
VLLFTIQSKLRATNRKLYVPREGNAISDVNKAWTCLEKAEHEREVLLRNELIRQEKLELL
AQRFDHKVAMRETWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYQERIQAVVE
LALEMEADGYYDTKRISAQKDNVLRQWRLLTELVGARRSRLEQNLTLQKIFQEMVYMIDW
MEEMQVLLVSKDLGKHLLEVEDLLQKHGLLEADIAAQAERVKALNAAALKFSELEGYQPC
DPQVIRNRVHHVQTCLEELGELAAKRRKELEDSRQLWAFFQEVEEAEAWIGEKEKILATK
TCGRDLSSVLALTNNHKTMLGELGNRRALLHQTMKKGEQILAKKRLGPGGIQEKMREVRL
RWKKLEEVMGLHQQRLQEALNFFQFSAETDDLVRWLQDIYRIVSSDDFGHDDYSTQGLLR
KHRTVVEEVEKHRAAVVALRKQLALLAPTHGQEVEVQIRVVEVEQLYGEVVEVAVLRQQW
LQDALAVYRMFSEVHACEVWVDEKEQWLQRMEVPEELDEVEVVQHRFESLDQEMNSVMGR
ILDVNQVVQQLVDGGHPSSEEVRACQDHLNSRWNRVVELVERKKNQLSSVLKIQNYLLEC
SEMKAQVREKRKAIEATQSGGGDLGGILALQRRLSTMEAALVVLEPRLVELQREGEILAA
AHPGRALEILVPFEEISEEWENLKRALQGCEDSLTVAGRFQQFIQDLDNFLGWLVKTQTA
VASEEVPESLSQAEKFLNHHAALKEEINGYEEDYVKIQAASDLLALEETEVPSVSLQRWL
QKLDAGWAKLLQSWDARREVLVQAHVFHLFLRDVHQCESSLYNQESTLVHVELPETVEGV
TNAIKKHKDFITTMDLNLQKIQVTLQAGENLQRQSHLYGHRVAEAVEGLRAKSHRNYQLA
QEWMRRLQDHLELQKFLQDCHELHGWMQEKTLMAGDPTRDPPPRPPKPWLKPQAFLVELE
QSKEWLEKIEKEGAELLKAKPELAEAVGAQLEELRRCWGELEASTQARTRRLAEAAAARR
LARSYAEMEAKLGTLEEQLQSVGAGPDLHSLSTQLRRLQTMESQVEEWSKEVGELQAAAA
ALPAQAVGAEAVGERQNAVGTRIVRLIEPLKERRRILLASKEVHQVSHELEDEVLWVQDR
LPLATLKDHGTNLQTVQQFIKKNQNLRREIQVHRPRVEEVLERARAVASIKSPEAEGVRR
LLEHLETTWGELQEQTELRQQTLDATYQLEQYYFDVAEVESWLGEQELLLMSEEKGKDEQ
STLQLLKKHLLTEQTVENYEETIGQLSRQCRALLELGHPQSEQVSRRQSQVDRLYVSLKD
LVEERKAKLEQQYWLYQLNREVDELEHWIAEKEVVAGSPELGQDFEHVTLLQEKFLEFAS
ETGSVGQERIAAVNQMVDELIDYGHADAATIAEWKDGVNEAWADLLELMETRAQMLAASH
ELHKFFNDCKEVLGQIEEKRQRLPELAAREGRTSATALQRALGAFEHDVEVLVTQVRQLQ
EGAAQLRTLYAGDNAEAIAGREQEVLRAWKELLAACEECRLHVASVAEKIRFVGTVRDLL
AWMDGVLCQIGAGEKPRDVSSVELLMNDHQGLKSEIEARGKSIAACLELGKSLLLSKSPA
ADEIKAHVEKLLAKKKEMLEKWDNHWERLQQMLEVHQFAQEAVVADAWLTAQEPLLKSQE
LGSSVDEVEQLIRRHEAFRKAAAAWEERFSSLRRLTTLEKLKAEQHQQPPTPLLTRKFLV
DPPVGPLPGGPVCRRPEPRVAYVRHQLHPERLQPALDRLHGPPGDGAPDGDPLPPSTADA
APVPPKTEEPGEGRAALLERRRERRERRLERQESSEAEPPRHNGKGGAKATLADIVEQLQ
EKEAAAPAPAPPPERPSPSRLPMGPEALPDRSPRPERPRARDRPKPRRRPRPKDTAPGDP
RRSRSAPAQGSVPPPAPPPAHTVHHEGFLFRKHELDGPNKKASNRSWVNLYCVLSKGDLG
FYKDSKGPTTGTTHGGEPLLNLHNSSSEVANDYKKKKNVFKLKTSDGSEFLLQAKDEEDM
RGWLQALASSAQEHAELARWSQGLLTTSSTDEGLPRREGDRRPSASTRRK
NT seq
7353 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaactggacaacccggacccgcagaacaacaacaacaacggtccgtgggag
ggaggggacgcgcgcggctgggacgacaccaccgccaccgccaaactcttcgagtgctcc
cgcatcaaagccctggctgatgagagggacgcggtgcagaagaagaccttcaccaagtgg
gtgaattcccacctggcgcgtgtctcctgccggatcggagacctctacgccgacctccgc
gatggcttcatcctcacccgactgctggaggtcctctctggagagcagttgcccaagccg
acgcggggccggatgcggatccactctttggagaacgtggacaaggccttacagttcctc
aaggagcaacgggtccacctggagaacgtcggctcccacgacatcgtggacgggaaccac
cgcctcaccttgggcctcatctggaccatcatcctccgcttccagatccaggtgatcaaa
atcaagaccgaggacaaccgggagacgcgttcggccaaagacgctcttctgctctggtgt
cagatgaagacctcgggttaccccgaggtgaacatccagaacttcaccaccagctggagg
gacggtttggccttcaacgctctcatccacaagcacagaccggatctcgtcgacttccac
aagttgaccaagtccaacgccacctacaacctccacacggccttcaacacggccgagcag
cacctggggctcagcaaactcctcgaccccgaggacgtcaacatggaggaccccgatgag
aagtccatcatcacctacgtggtgtccttctaccactacttctccaagatgaaggcgttg
gctgtggaagggaagcgcattgggaaggtcctggaccaagccatggagatcgaggccatc
atcgcccgctacgaggcgctggcggccgaccttctggcctggatccaccacaccatcacc
atcatcagcaaccagaagttcgccaactccttgacgggggtccagcagcagctccaggcc
ttcaccgccttctgcactctggagaaacccatcaagttccaggagaagggcaacctggag
gtcctgctcttcaccatccaaagcaaactacgggccaccaaccgcaaactctacgtcccg
agagagggcaacgccatctccgacgtcaacaaggcctggacgtgcctggagaaggcggag
cacgagcgggaggtcctcctgcgcaacgaactgatccgtcaggagaaactggagctcttg
gcccaacgcttcgaccacaaagtcgccatgagggaaacgtggttgaacgagaaccaacgt
ttggtgtcacaggacaactttgggtacgacctccccgcggtggaggcggccatgaagaag
cacgaggccatcgaagccgacatctcgtcctaccaagagcgcatccaagcggtggtggag
ttggcgctggagatggaggccgacggttactacgacaccaaacgcatcagcgctcagaag
gacaatgtcctccggcagtggagacttttgaccgagttggtcggcgcccgaaggtcccgt
ctggagcagaacttgacgctgcagaagatcttccaggagatggtctacatgatcgattgg
atggaggagatgcaggtgttgttggtgtccaaagatctggggaagcatctgctggaggtg
gaggaccttctgcagaagcatgggctgctggaggccgacatcgccgcccaggccgagcga
gtgaaggccctcaacgccgcagcgctcaagttctccgagttggaaggctaccaaccgtgt
gaccctcaggtcatccgcaaccgcgtccaccacgtccagacgtgtttggaggagctcggc
gagttggcggccaagagacgcaaagagttggaggattctcgtcagctttgggccttcttc
caagaggtggaggaggccgaggcgtggatcggcgagaaggagaagattttggccaccaag
acctgcggccgagacctcagcagcgttttggctttgaccaacaaccacaagaccatgctg
ggcgagttgggcaaccgccgcgccctcctacaccaaaccatgaagaagggcgagcagatc
ttggccaagaaacgcctcggtcccggtgggatccaggagaagatgcgagaggtccgcctt
cgctggaagaagctggaagaggtgatgggactccaccagcaacgtctgcaggaggccctc
aacttcttccagttcagcgccgagacggacgatttggtgcggtggctgcaggacatctac
cgcatcgtctccagcgatgacttcggtcacgacgattactccactcaagggcttctccgg
aagcatcggacggtggtggaagaggtggagaagcaccgagcggccgtggtggccctcagg
aagcagttggctcttttggcccccacccacggccaagaggtggaggtgcagatccgggtg
gtggaggtggagcagctctacggagaagtggtggaagtggccgtcctgaggcagcagtgg
ctccaggacgctttggccgtctaccggatgttcagcgaggtccacgcctgcgaggtgtgg
gtggacgagaaggagcagtggttgcagaggatggaagtgcccgaagaactggacgaggtc
gaggtggtccaacataggtttgaaagtctggaccaggagatgaacagcgtgatgggacgt
attttggacgtcaatcaagtggtgcagcagttggtggatggaggtcatccaagttccgag
gaggtccgggcttgtcaggaccacctcaacagcaggtggaaccgtgtggtggaactggtg
gagcgtaagaagaaccaactcagctccgtcctgaagatccagaactacctcctggagtgc
agcgagatgaaggcccaagtgcgggagaagagaaaggccatcgaggccacccaatccggt
ggcggtgacctgggtgggatcttggctctgcaacgccgcctctccaccatggaggcggct
ttggtggtgttggaaccgcggttggtggagcttcaacgagaaggtgaaatcttggccgcc
gctcaccctggaagagctttggagattttggtgcccttcgaggagatcagtgaagagtgg
gagaacctcaagagggctcttcaaggctgtgaggactccttgacggtggccggtcgcttc
caacagttcatccaagacttggacaacttccttgggtggttggtgaagacccaaacggcc
gtggcttccgaggaggtccccgagagtttgagtcaagcggagaagttcctcaaccaccac
gcggccctcaaagaggagatcaacggctacgaagaggactacgtcaagatccaagcggcg
agcgacctcctggccctggaggagaccgaggtgccctccgtgtcgctgcagcggtggctc
cagaagctcgacgccgggtgggcgaagctcctccagagctgggacgcccggcgggaggtc
ttggtccaagcccacgtcttccacctcttcctccgagatgtccaccagtgcgagtcgagc
ctctacaatcaggagtcgacgttggtccacgtggagctcccggagacggtggaaggggtg
accaacgccatcaagaagcacaaagacttcatcaccactatggacctcaacctccagaag
atccaagtgaccctccaagccggagagaacctccagcggcaaagccacctctacggccac
cgcgtggccgaggccgtggaagggctccgagctaagagccaccgcaactaccagttggcc
caagagtggatgcgacggctgcaggaccacctcgagctccagaagttcctccaagactgc
cacgagctgcatgggtggatgcaggagaagaccttaatggccggggaccccaccagggac
ccccccccgcgcccccccaaaccttggctgaagcctcaggcgttcctggtggagctggaa
cagagcaaggagtggttggagaagatcgagaaggaaggtgcggagctcctgaaggccaaa
cccgagttggccgaggccgttggggcccaactggaagagctgcggcgatgttggggggag
ttggaggcctccacgcaggcccggacgcggcgcttggccgaagccgcggccgcccggcgc
ctggcccggagctacgctgagatggaggccaagttgggcactctggaggagcagctgcag
agcgtgggagcggggccggacctccacagcctcagcacgcagctccgacggctgcagacg
atggagtcgcaggtggaggagtggtccaaggaggtgggggagctgcaggcggcggcggcg
gcactgccggcccaggccgtgggcgccgaggcggtgggagagcggcagaacgcggtgggg
acgcgcatcgtccgcctcatcgaacccctcaaggaacggaggaggatcctcctggcttcc
aaggaggtccatcaggtcagccacgagctggaggacgaggtgctgtgggtgcaggaccgc
ctgcccttggccacgctgaaggaccacggcaccaacctccagacggtccagcagttcatc
aagaagaaccagaacctccgccgggagatccaggtccaccgacctcgcgtggaggaggtt
ctggaacgcgcccgagctgtggcctccatcaaaagccccgaggctgaaggagtccgacgt
cttctggagcacttggagacgacgtggggggagctccaagagcagaccgagctccggcag
cagaccttggatgccacctaccagctggagcagtactacttcgacgtggccgaggtggag
tcgtggttgggcgagcaggagcttctcttgatgagcgaagagaaggggaaggacgagcag
agcactctccaactcctcaagaaacacctcctgacggaacagacggtggagaactacgag
gagaccatcggtcaactgtcccgtcaatgccgggcgcttctggagctcggccaccctcaa
agcgaacaggtcagcaggcggcagtcgcaggttgaccgactctacgtgtctctgaaggac
ctggtggaggaacgcaaagccaagttggagcagcagtattggctctaccagctcaaccgc
gaggtggacgagctggagcactggatcgccgagaaggaggtggtggccggctcgccggag
ctggggcaggacttcgagcacgtcacgctcctccaggagaagttcctggagttcgccagc
gagacgggcagcgtcgggcaggagcgcatcgccgccgtcaaccagatggtggacgaactc
atcgactacggccacgccgacgccgccaccattgccgagtggaaggacggcgtcaacgaa
gcttgggcggatcttctggagctgatggagacgcgggcgcagatgttggccgcttctcac
gagctccacaagttcttcaacgactgcaaagaggttttgggtcaaatcgaggagaaacgg
caacgtctgccggagctggcggctcgcgagggcaggacctcggccaccgccctgcagcgg
gcgttgggggccttcgagcacgacgtggaggtcctggtgacccaagtgcggcagctccaa
gaaggggcggcgcagttgaggaccctctacgctggggacaacgccgaagccatcgccgga
agggagcaggaggtgttacgggcgtggaaggagctcctggcggcgtgcgaggagtgtcgg
ctccacgtggcgagcgtcgccgagaagatccgcttcgtcggcaccgtcagagaccttctg
gcttggatggacggtgtcctctgccagattggcgccggcgagaagccgagggacgtctcc
tcggtggagctgctgatgaacgaccaccaagggctgaagagcgagatcgaggcccgcggc
aagagcatcgccgcctgcttggagctgggcaagagccttctcctcagcaagagcccggcg
gccgacgagatcaaagcccacgtggagaagctgttggccaagaagaaggagatgctggag
aagtgggacaaccactgggagcggctgcagcagatgctggaggtccaccagtttgcccag
gaggccgtggtggccgacgcttggctgacggcgcaggagcctctgctgaagagccaggag
ttgggcagcagcgtggacgaggtggagcagctcatccggcggcacgaggccttccgcaaa
gccgccgccgcctgggaggagaggttcagctccttgcggcgtctcaccacgctggagaag
ctcaaagcggagcagcaccaacagccgccgacgccgctcctgacccgtaaattcctggtg
gaccctccggttgggccgttgccgggaggccccgtctgccgccgcccggagccgcgcgtc
gcctacgttcgccaccaactccaccccgaacgcctccaaccggcgctcgaccgcctccac
ggccctcctggcgacggcgctcccgatggggaccctcttccgccctccaccgccgacgcc
gctccggtgccccccaagacggaagaacccggagaggggagagcggcacttctggaacgg
cgccgggagcggcgcgagcggcgcttggagagacaggagtcgagcgaagcggagccgccg
cggcacaacggcaaaggcggcgccaaagccactctggccgacatcgtggagcagctgcag
gagaaggaggcagcggcgcccgccccagcgccgcccccagagcgtccgtctccgtctcgg
ctgccgatgggtccggaggccctcccggatcggagccctcggccggagcgcccccgcgct
cgcgatcgccccaaaccgcgccggcggccgcgccccaaagacaccgctccgggggaccct
cggaggtcgcggtcggcgccggcgcagggaagtgtcccccccccggccccgccccccgcc
cacaccgtccaccacgaggggttcctcttccggaagcacgagttggatggacccaacaag
aaggcgtccaacaggtcgtgggtgaacctctactgcgtcctgagcaaaggtgacctcggc
ttctacaaggactccaaaggcccaaccaccggcaccacccacggtggagaacctctcctc
aacctccacaactccagcagcgaagtggccaacgactacaagaagaagaagaacgtcttc
aagctcaagaccagcgatggaagcgagttcctcttgcaagccaaggatgaggaggacatg
cgggggtggctgcaggcgctggcgtcctcggcgcaggaacacgccgagctggcgcgatgg
agtcagggcctcctcaccacctcctccaccgacgagggacttccccggcgcgagggcgac
cgacgtcccagcgcctccacccggaggaagtga
DBGET
integrated database retrieval system
