Cuculus canorus (common cuckoo): 104058218
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Entry
104058218 CDS
T08597
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104058218 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104058218 (ATRX)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104058218 (ATRX)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
104058218 (ATRX)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104058218 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
104058218
NCBI-ProteinID:
XP_053931231
LinkDB
All DBs
Position
10:complement(18033054..18116268)
Genome browser
AA seq
2449 aa
AA seq
DB search
MKRCDGAHGCRSHLRAVWKGRRRTARVQSLGESKLNTLVQKLHDFLAHSSEESEDANSPP
ASKNKTAGKSREPKSSPAAMENNREEGSSSSERTKSIGSSRSKRKPTFVTKYVGSDDEQV
LDETVNEDISNENSENDVDMKSLPKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEA
PKKRGEEGLHGIVSCTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGM
DEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDL
VTACDSVFENLEQLLQQNKKKIRVESEKSKIYDHADKFSPKRNNSNCNGEEKKLDDSYSG
SVTYSYKALMVPKDLVKKTKKLIETTANLNSRFVSFLKNALENVEMSPTVQLCQLKAFKS
VLSDMKKTHLALEEGLNMEIQALSDKIKDKNTKEKKTDVRSEKNEQKKDEGKEHVSLKED
DTVKTEKKVVAEQPDSEPMDQSVPTMEQTDDKPTSGEDKKSGSNEEPQYAPNSTEALDMD
IVSIPSSVPEDIFETLESAMEIQVASDEQDGGNTGTDHETSNSNTKSNAAVKDTKGGTKL
KSSAKGTKELIVKLTPVSLSECAVKAEEQDRNLEKGSEDADEIPGAENGVSVKQNHKADS
KHSVENETVSHAEESDLRRSPRVKTTPLRRQTDISPLTSNSEEDSNDTCNEKRKSSQQPR
RKNDKRSSSDSAIDGPSPDKPSKSKKPYVLDHSSDSDEMPAVLKEAAMMNHSSSDIESNS
EAPANDQKTSDVLKNQPGKDENGKRKRKSSSSGSDLEAKRGKLAKNSTATKKKRQNYSDS
SNYDSELEKEIKILSKIESAKKAKKKYSRKEDSYDSSEEEQRKKVSKRKMNLRKKRGKSS
EDDDTEKSCPEKEVNHSPKDKKAGKGSAAKERTKKDLKEKTVKEKHDESSDVEKSLLEKE
ESCPRGGKQTEGKKSKDLRKKKTQEDSSSESTEKSAKKEHSSDSQKERIKNKKGSESKAE
KSEKVKKEGHKKEQGDSSSDVEKSPPEKGSGNSSENDRTKNEPVLKEKKRRNLRERASER
VRLDLSSDAEKLPLKEESSSEDTVRRKKQTKTKEKKKISHKKKMSKKDQSDSSSSSDEES
YEDSKKKTKRGSMKESKKSNLKKKVSKKKVVVTSSSSSDEEENDEQNSTGDGSSDEQKIM
PVTENLVLSTGTGFCQSSGDEGEAKSRAVPMEEEEDDDDDDPENRIAKKMLLEEIKANLS
SDEDASSDDESDKGKKKTGKQNENTADDEEKEKEENSESDSEEEESSKKPRYRHRLLRHK
LTVSDGESEEKSEEKKVKPKEKKEGKRRNRRKVSSDDSNDSEFHESAVSEEVSESEDDQR
PRTRSAKKAEAEENQRSYKQKKKRRRIKVQEDSSSDNDNKSNSENEENDDSKSPGKGRKK
IRKIIKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKCPITTKLVL
DEDEETKEPLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLG
KTLQVVSFLHTVLLCDKLDFRTALVVCPLNTALNWLNEFEKWQEGLEDDEKLEVCELATV
KRPQERSYMLQRWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCD
EGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNR
FINPIQNGQCADSTLVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRM
TPIQCKLYQYYLDHLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENK
GYFDEDSLDEFIASDSDETSMSLSSDDYAKKKKSKGKKVRKECSSSGSGSDNDVEVIKVW
NSRSRGGGDGNAEELANNPSKSDEGKGASSSNPGSPAPDWYKDFVTDADAEVLEHSGKMV
LLFEILRMAEELGDKVLVFSQSLISLDLIEDFLELANREKNEKDKTPIYKGEGKWFRNID
YYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPS
YDIQSIFRVYRFGQSKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMN
ELTELYTFEPDLLDDPNSEKKKKRDTPLLPKDTILAELLQIHKEYIVGYHEHDSLLDHKE
EEELTEEERKAAWAEYEAEKKGLTMRFNMPAGTNMLPTNFNSQTPYIPFNLGALSAMSNQ
QLEDLINQGREKVVEATNSVTAARIQPLEDIISTIWKENVTLTESQVQALALSRQASQEL
DVKRREAIYNDVLTKQQMLIGCVQRILMNRRLQQQYNQQQQQMSYQQAAMSHLMMPKPPN
LIMNPSNYQQIDMRGMYQSVSGGMQPPPLQRAPPPMRGKNAGPSQGKSM
NT seq
7350 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgttgtgacggcgctcacgggtgtcgctcccatcttcgggctgtttggaagggg
aggcgtcgcactgcccgagtgcagagcctcggtgaaagcaagttgaatacattggtgcag
aaacttcatgacttcttggctcactcgtcggaggaatctgaggacgcaaactctccacca
gcatctaaaaacaaaaccgcaggtaaaagcagagaacctaaaagtagtccagctgcaatg
gagaacaatagagaagagggtagtagttcttcagaaagaaccaaatccataggatcatca
cgttcaaaaaggaaacctacatttgtaacaaaatacgttggatcggatgatgaacaagtc
ttggatgaaactgtaaatgaagatatttcaaatgagaactcagaaaatgatgttgatatg
aaaagccttcctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagacaaa
gatgattttaaagggcctgaatttagaagcagaaataccgttaaaatgaaacccgaagct
cccaaaaagcgtggagaggaagggctacatggaattgtcagctgtacagcttgtgggcaa
caggtgaaccattttcaaaaggattcaatctatagacatcctacactgaaagttcttatt
tgtaagacttgctacaagtattacatgagcgatgacattagccgtgattcagatggaatg
gacgaacagtgtaggtggtgtgctgaaggtggaaatctcatttgctgtgacttctgccat
aatgccttctgtaaaaagtgcattttgcgcaacctgggtcgaaaggagctatcgactata
ctggatgaaaacaaccagtggcactgctatatttgccatccagagcctttgttggacttg
gtcactgcatgtgacagtgtctttgaaaacttagaacagttactgcaacaaaacaaaaaa
aagatcagagttgaaagtgaaaaaagtaaaatatatgaccatgcagacaagttttctcca
aagagaaataattcaaactgtaatggtgaagaaaaaaaactagatgattcatattcaggt
tctgtaacgtattcttataaagcactaatggtgccaaaagacttggttaagaaaacaaaa
aagctgattgaaactacagcaaacctgaactctaggtttgtaagctttttgaaaaatgct
ctagaaaatgtagaaatgagcccaactgtgcaactctgtcagctgaaagcttttaaatct
gtgttgagtgacatgaaaaaaactcatctggcactagaagaaggtctgaacatggagatt
caagctttgagtgataaaatcaaagataaaaataccaaagagaaaaaaactgatgttcga
tcagaaaaaaatgagcagaaaaaagatgaaggaaaggaacatgtgtcattaaaagaggat
gacactgtaaagactgagaaaaaagttgtagcagaacagcctgacagtgagcccatggat
caaagcgttccaacaatggaacaaacagatgacaagcctacttctggcgaagataaaaag
tctggcagcaatgaagaacctcagtatgcgcctaatagtacagaggctttagacatggat
atagtgtccattccctcatctgttcctgaagatatttttgagactctagaatctgctatg
gagattcaggttgcgtcagatgagcaagatggtggaaatacaggaacagatcacgagact
tcaaattctaatacaaaatccaatgctgctgtgaaagataccaaagggggtactaagtta
aaatcatcggctaaaggaacaaaagaattgattgtaaaattgactcctgtttctctttct
gagtgtgcagttaaagctgaagagcaagaccgcaatttagaaaagggaagcgaggatgct
gatgaaataccaggagcagagaacggtgtttctgtgaaacaaaatcataaagctgacagt
aaacattccgtggagaacgaaactgtctcacacgcagaagaatctgatctcaggaggtca
ccacgtgtaaagaccacacctctgaggcgccaaactgacatcagtccactaacgtcaaat
tcagaagaagatagcaatgacacatgtaatgaaaagagaaaatcttcacaacaaccaagg
aggaaaaatgataaaagaagttcttctgacagtgctattgatggtcccagccctgataaa
ccttctaaatcaaaaaagccatatgtgttagatcacagctcagattctgatgagatgcca
gctgttcttaaagaagcagctatgatgaatcacagttcttcagatattgagagcaatagt
gaagcaccagcaaatgatcagaagacctcagatgttctgaagaatcaaccaggaaaggat
gaaaatggaaaacgaaaaagaaaaagttccagttctggttctgatttagaggctaaaaga
ggcaaattagctaaaaattccactgctactaaaaagaaacgacaaaactattcagattct
tcgaactatgattctgagttagagaaggaaataaaaattttgagtaaaattgagtctgca
aaaaaagctaagaaaaaatactcacgaaaagaagatagttacgattcctctgaagaagaa
cagaggaaaaaagtaagtaagagaaagatgaatttgaggaaaaagagaggtaaatcttct
gaagatgatgatactgaaaagtcttgcccagagaaggaggttaatcattctcctaaagat
aaaaaagctggtaaggggtcagctgcgaaggagaggacgaagaaagacttaaaagaaaaa
actgtaaaggaaaagcacgatgagtcttctgacgttgagaagtctttactggagaaagag
gagagttgtcctagaggtggaaagcaaactgagggtaagaagagcaaggatttgagaaag
aaaaagacgcaggaagattcttcttcagagagtactgagaaatctgcaaagaaagagcac
agttctgattctcaaaaagagagaatcaagaacaaaaaaggatcagaaagcaaagcagag
aaatctgaaaaagtgaagaaggaaggtcacaagaaggaacaaggtgattcctcttctgat
gtggaaaagtcgcctccagagaaaggaagtggcaattcttctgaaaatgacagaactaaa
aatgagccagtgcttaaagaaaagaaaaggaggaatttaagagagagagcatcagaaaga
gtacggcttgatttatcctctgatgctgagaaattgcctctgaaagaggagagttcctct
gaagacactgtgcggaggaaaaaacaaactaaaactaaagaaaagaaaaaaataagtcac
aaaaagaaaatgtctaagaaggaccagagtgactcatcgtcctcttctgatgaggagtct
tatgaagacagtaagaaaaagaccaaaagagggtcaatgaaagaaagtaaaaagagtaac
ttaaaaaagaaagtgtcaaaaaagaaggtggttgtcacttcctcttcctcatctgatgag
gaagaaaatgatgaacagaattcaacaggtgacggaagcagtgatgagcagaaaattatg
ccagtgaccgaaaacctagtgctgtctactggcacaggattttgtcagtcatcaggagat
gagggagaggctaaatcaagggctgttccaatggaggaggaggaagatgatgatgatgac
gatcctgagaatagaattgccaagaaaatgcttttagaagaaatcaaagccaatctttcc
tctgatgaggatgcatcttcagatgatgaatcggataaaggaaaaaagaaaactggaaag
caaaatgaaaacacagcagatgatgaagagaaggaaaaagaagagaattctgaatcggat
tcagaggaagaggaatcgtcaaagaagcctagatacagacacaggctgctgaggcacaag
ctgacagtgagtgatggagagtctgaagaaaaaagtgaagaaaaaaaagtgaagcctaaa
gagaaaaaagaagggaagcgccgaaatagaaggaaagtgagcagcgatgattcaaatgac
tccgagtttcatgaatctgcagttagtgaagaagtcagtgagtctgaagatgaccaacgt
ccaagaacaaggtctgccaagaaagctgaggcagaagaaaatcaacgcagttacaaacag
aaaaagaaacgaaggcgtataaaggttcaagaggattcttcaagtgataatgacaataag
agtaattctgagaatgaggaaaatgatgattccaaatctcctggaaaaggcaggaagaaa
ataaggaaaattattaaagatgacaagcttagaacagaaacacaaaacgcacttaaagaa
gaagaagaaagaagaaaacgtatagcggaaagggaacgggagagagagaaactgagagag
gtgatagagatagaagatgcttcacctctgaaatgtcccattacaactaagttggtttta
gatgaagatgaagaaaccaaagaaccactagtgcaggttcacaggagtattgttaccaga
ctgaagccccaccaagtcgatggtgttcagttcatgtgggattgctgttgtgaatctgta
aaaaaaacaaagacatctcctggttctggatgcattctcgctcactgtatgggcctgggc
aaaacattacaggtagtaagttttcttcacacagtgttgctgtgtgacaagctggatttt
cggactgctctggtagtgtgtccactgaacactgccttgaactggttgaatgagtttgaa
aaatggcaagaaggcttagaagatgatgaaaaactagaggtctgtgaactagcaacagtg
aaacgccctcaagagcgaagctacatgctccaacgttggcaagatgaaggaggtgtgatg
ataataggctacgagatgtaccgtaatcttgcgcaaggcaggaatgtgaagagtagaaaa
cttaaagaaatatttaataaagctttagttgatccaggtcccgactttgttgtttgtgat
gaagggcacatattgaaaaatgaagcatctgctgtttcaaaggcaatgaattctattcga
tctaggagaagaataattcttacaggaacaccactgcagaataatcttatagaatatcac
tgcatggttaactttattaaggagaacttgcttggttcaattaaggaattccgaaatcga
tttataaatccgattcagaacggtcagtgtgcagactccacgctggtagatgtcagagta
atgaagaagcgtgcacatattctctatgagatgttagctggatgtgttcagaggaaagat
tacacagcattaacaaagttcctcccaccgaagtatgagtatgttctagaagttcgaatg
acacctattcagtgcaaactctaccagtactacctggatcatttgacaggtgtaggtggt
ggcaatgaaggtggaagaggcaaagctggagctaaactattccaggatttccagatgttg
agcagaatctggactcacccttggtgtttgcagctggactatattagcaaagaaaataag
ggctattttgatgaagacagtctggatgagttcatagcttcagattccgatgaaacctca
atgagcttaagttctgatgattatgcaaagaaaaaaaaatccaaggggaaaaaagtgagg
aaagagtgtagctcaagcggaagtggcagtgataatgatgtcgaagtcattaaagtctgg
aattcaagatctcgtggaggtggagacggaaatgcagaagaacttgctaacaacccttca
aagtcagatgaaggcaaaggtgcctcctcctccaatcctggtagcccagcaccagactgg
tacaaagattttgtcactgatgcggatgctgaagtgttggaacattctgggaaaatggtg
cttctctttgaaattcttcgaatggcagaggagcttggagacaaagtcctagtgtttagc
cagtccctcatatcactggatttgatagaagatttcctggagctggccaacagggaaaaa
aatgaaaaagataagactcccatttataaaggtgaaggaaaatggttcagaaacattgat
tactatcgcttggatgggtcaactacagctcagtcaagaaagaaatgggctgaagaattt
aatgatgaaaccaatgtgagaggccgcttgttcattatatccaccaaggcaggttccctc
ggaattaatctcgtggctgctaatcgagtcatcatctttgatgcttcctggaacccatca
tatgacatccagagtattttcagggtttaccgctttggacagagcaaacctgtgtttgtt
tacaggtttttggctcagggaacgatggaagataagatctatgatcgtcaggtaacgaag
cagtcgttgtctttccgggttgttgaccagcagcaagttgaacgtcatttcactatgaat
gaacttacagagctgtacacttttgagccagatttgctggatgatcctaattcggaaaag
aaaaagaagagagacacaccactgttgccaaaagataccattctggcagaattgcttcaa
atccataaagagtacatagttgggtatcatgaacatgattcgctcctggaccataaggag
gaagaggagctcactgaggaagagaggaaggcagcatgggcagaatacgaagcagaaaag
aagggcttgactatgcgtttcaacatgccagccgggaccaatatgcttcccaccaatttc
aactctcagacgccatatatacctttcaatctgggtgctctgtcagcaatgagtaatcag
cagctggaggacctgattaatcaaggaagagagaaggttgtggaagctaccaacagtgta
actgctgcaagaattcagccccttgaagacattatttcaaccatatggaaagaaaatgtg
acgctgactgagagccaagtgcaggccctggcactgagcagacaggcgagccaggagctt
gacgtcaagcgccgagaagccatctacaacgacgtccttactaaacaacagatgttgatc
ggttgtgttcagaggatactcatgaaccgaagactacagcagcagtacaatcagcagcag
cagcagatgtcttaccagcaagcggcgatgagtcacctcatgatgccaaagcctccaaat
ttaatcatgaatccttccaactaccaacagatagatatgagaggaatgtatcagtcagtg
tctggtgggatgcagccaccaccgttgcagcgcgcaccacccccaatgagaggcaaaaat
gcaggtccttcccaagggaagtcaatgtga
DBGET
integrated database retrieval system
