Cuculus canorus (common cuckoo): 104058444
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Entry
104058444 CDS
T08597
Symbol
GABRA2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04080
Neuroactive ligand-receptor interaction
cuca04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104058444 (GABRA2)
04082 Neuroactive ligand signaling
104058444 (GABRA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104058444 (GABRA2)
Ion channels [BR:
cuca04040
]
Ligand-gated channels
GABA-A
104058444 (GABRA2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
104058444
NCBI-ProteinID:
XP_053922031
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Position
4:complement(27781585..27844844)
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AA seq
471 aa
AA seq
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MPGPTRTEQGVLRRAAMKRKLALSEMQLVLLVLLVWLPTRSVLADSLEDEAKNNITIFTR
ILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQRWKDERLKF
KGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQA
ECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDLLGQT
IGKETVKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTV
FGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAW
DGKSVVNDKKKEKASVIKKNNAYAVAVANYAPNITKDSVLPTISKSATTAEPNKAKPEAK
PQEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWATYLNREPVLLGFAPST
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcccggtcccacgcgtactgaacaaggggttttgcgaagagcggcgatgaagaggaag
ctggcactctccgagatgcagttggttcttctcgttttattggtgtggctaccaacaaga
tcagtgctggctgactccctggaagacgaagctaagaataacatcaccatctttacaaga
attctagacagacttctggatggttatgataatcgtctcagacctggattaggagatagt
attactgaagtcttcactaatatctatgtgaccagttttggacctgtttcagatacggat
atggagtacacaatagatgttttcttccgtcagagatggaaggatgagagattaaagttt
aagggcccaatgaacattcttcgattgaacaacttaatggccagcaaaatctggacccca
gatacattttttcacaatgggaagaaatcagtggctcataatatgacaatgccaaacaag
cttctacgaatccaagatgatggaactctcttatacaccatgaggcttacggtccaagct
gaatgcccaatgcacttagaggacttccctatggatgctcactcatgcccacttaaattt
ggcagctatgcatacacaacttcagaagtgacatacatttggacttacaatgcttcagat
tcagtacaagtggcaccagatggatcaagattgaatcagtatgatcttttaggccaaaca
attggaaaagagactgttaaatcaagtacaggtgaatatacggtaatgacggctcatttc
cacttgaagagaaaaattggttattttgtgattcagacttaccttccctgtatcatgact
gtcattctctctcaagtgtcattctggctgaacagagaatctgtacctgccaggacagtc
tttggagtaacaactgtgttgacaatgacaacactgagcatcagcgctcgaaattcactc
cccaaagttgcatatgcaacagctatggattggtttattgctgtttgttatgcatttgta
ttctctgcattaattgaatttgcaactgtaaattatttcacaaaacgaggatgggcctgg
gatggaaaaagtgtagtgaatgataagaaaaaagaaaaagcatcagtcattaagaaaaac
aatgcctatgcagtggctgttgccaactatgctccaaatattaccaaggactcagtgcta
ccaaccatctccaagagtgctacaaccgcagaacccaacaaggcaaagccagaagcgaag
ccacaggaagcaaagaagacattcaacagtgttagcaaaattgacaggatgtctagaata
gtgtttccagtcttatttggtacttttaatttagtgtattgggctacatatttaaacagg
gagcctgtcttacttggttttgcaccatcaacctaa
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