Cuculus canorus (common cuckoo): 104058487
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Entry
104058487 CDS
T08597
Symbol
WASHC5
Name
(RefSeq) WASH complex subunit 5 isoform X1
KO
K18464
WASH complex subunit strumpellin
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104058487 (WASHC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104058487 (WASHC5)
Membrane trafficking [BR:
cuca04131
]
Protein recycling
Others
WASH complex
104058487 (WASHC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
HTH_43
DUF3106
SNaCT8
Motif
Other DBs
NCBI-GeneID:
104058487
NCBI-ProteinID:
XP_009558307
LinkDB
All DBs
Position
2:13051380..13078971
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AA seq
1159 aa
AA seq
DB search
MVDFLAENNLCGQAILRIVSCGNAIIAELLRLSEFIPGVFRLKDKADQQKYGDIIFDFSY
FKGPETCEGRLEAKPELLDLDEEFRENNIEILTRFYLAFQSVHKYIVDLNRYLDDLNEGI
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGYSSQPGAKRPPNYPESYFSRVPISETFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALATQAAMLYVILYFDPSILHTQQAKMREIVDKYFPDNWVISIYMGIAVNL
AEAWEPYKAAKTALNYTLDLSNVKEQASRYAAVTERVHTQVQQFLKEGCLREELVLDNIP
KLLNCLRDCNVAIRWLMLHTADTACDPNNKRLRQIKDQILTDSRYNPRILFQLLLDTAQF
EFILKEMFKQMLSEKQAKWENYKKEGSERMTELADVFSGVKPLTRVEKNENLQAWFREIS
KQIMSLNYDDSTAAGRKTVQLIQALEEVQEFHQLETNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQLIDSFTSIMQESIRVSPSMVTKLRATFLKLASALDLPLLRI
NQANSPDLLSVSQYYSGELVSYVRKVLQIIPESMFTSLLKIIKLQTHDIIEVPTRLDKDK
LRDYAQLGPRYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAL
ALHRGLIFNPRARPSELMPKLKEMAATMDGFHRSFEYIQDYVNIYGLKIWQEEVSRIINY
NVEQECNNFLRTKIQDWQSIYQSTHIPIPKFTPVDESVTFIGRLCREILRITDPKITCYI
DQMNTWYDTKTHQEVTNSRLFSEIQDTLGTFGLNGLDRLLCFMIVKELQNFLSMFQKNIL
RDRTVQDTLKALMNAVSPLRGIIANSNKVYSTAIAKTQKIWTAYLDSIMKVGQMQILRRQ
ITNELNYSCRFDSKHLAAALENLNKATLADIEAHYQNPSLPYPKEDNTLLYEITAYLEAA
GIHNPLNKIYITTKRLPYFPTVNFLFLISQFPKLQYTRNLGVVCKRPADQIDWLPLVLGL
LTLLKQFHSRYTEQFLALIGQFIHSTMEQCTSQKIPEMPADVVGALMFLEDYIRYTKLPR
KVVEAHVPSFIFDEFRTVL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggttgattttctagctgaaaacaatctctgtggtcaggcaattcttcggattgtttcc
tgtgggaatgccatcattgcagagcttctgagactttccgaattcattcctggtgtcttc
aggctaaaagacaaggctgatcaacagaagtatggggatatcatttttgatttcagttat
tttaaggggcctgaaacatgtgaaggcagactggaagccaaacctgagttactggattta
gatgaagaatttcgtgaaaacaacattgaaattttgacaagattttacctagcttttcag
agtgtacataaatacattgtagatttaaacagatatttagatgacctcaatgaaggaatt
tacattcagcaaacattagaaacggtcctccttaatgaagatggaaaacagcttctatgt
gaagcgctctatttatatggcgttatgctgctggtcattgaccagaagattgaaggagaa
gtgagagagagaatgttggtttcctactacagatacagtgcagcccgatcctctgctgat
tccaatttagatgatatctgtaaattgcttcgaagcactggatactcgagccaacctgga
gctaaaagacctccaaactaccctgagagttacttcagcagggtacccataagtgaaaca
ttcattagcatggttattggccgcttacgctcagatgacatttataaccaggtttctgca
tatccattaccagaacaccgcagcacagccctggccactcaggctgctatgctctatgtg
atactgtattttgatccttccattcttcacactcaacaagcgaaaatgagagagatagtg
gataaatactttccagataattgggttattagcatttacatgggaatcgctgtaaatctg
gcagaagcatgggagccctacaaagctgctaaaactgccctcaactacacactggatctt
tcaaatgtcaaagaacaggcaagcaggtacgctgccgtcactgagcgtgtgcacactcag
gtgcagcagtttctcaaagagggctgtctgagggaagagctggtgctggacaatattccc
aagctgctgaattgcctgcgagactgcaacgtagcaatccgctggctgatgcttcacact
gcagacacagcttgtgatccaaataacaagcgtctccgccagataaaggatcaaattcta
acagattcaaggtataatcctaggatccttttccaacttcttctggatacagctcaattt
gaattcattttgaaagagatgttcaagcagatgctgtcagaaaaacaagcaaaatgggag
aactataaaaaggagggatctgaaaggatgactgagcttgctgatgtcttctccggagtt
aaacctcttactagagtagagaaaaatgaaaatcttcaggcttggttcagagaaatctcc
aagcaaataatgtctctgaactatgatgattccactgcagcaggcagaaaaactgtgcag
ctcatacaggcactggaggaggtccaagagtttcaccagctggaaacaaacctgcaggtt
tgccagtttctggctgacacacgcaaatttctccatcagatgatccggactatcaacatt
aaagaagaggtcttgatcaccatgcagatagttggtgatctttcttatgcttggcaatta
attgacagctttacatctattatgcaggaaagcataagagtcagtccatcgatggtaact
aaactcagagccactttcctaaagcttgcttctgctcttgacttgccacttctccgcatc
aatcaagcaaacagtcccgatcttctcagcgtatcacagtattattctggcgagttggtt
tcctatgtaagaaaggttctacagataattccagaaagcatgtttacatctctgctgaaa
attataaagcttcagactcatgatattattgaagtgcctactcgccttgataaggacaag
ctacgagattatgctcagcttggaccacgatacgaggttgccaaactaacccatgcaatt
tcaatcttcactgaaggtatcctcatgatgaaaactactttagttggtatcatcaaggtg
gacccgaaacagttactagaggatggaataaggaaggagctggtaaaacgtgtagcccta
gctcttcacagggggctcatctttaatcctagagccaggccaagcgaactgatgcccaaa
ctgaaagaaatggcagctacaatggatgggttccatcgatcttttgaatacatccaggac
tatgtcaacatatatggtttaaaaatttggcaagaggaggtgtctcgtattattaactac
aacgtggaacaggagtgcaataacttcttaagaacaaagattcaagactggcaaagcata
taccagtctactcatattcctataccaaaattcacacctgtggatgaatctgtaacattt
attggtcgtctttgcagagaaatcctgaggatcacagacccaaaaatcacatgttacatt
gaccaaatgaacacctggtatgacaccaaaactcatcaggaagtaaccaatagtcgtctc
ttctcagagatacaagatactttgggtacctttggtctcaatggtttagacaggctgctg
tgtttcatgattgtaaaggagctgcagaatttcctcagtatgttccagaaaaatatattg
cgtgacaggacagtacaggataccttaaaagcacttatgaatgctgtcagccctctcaga
ggaattatagcaaattcaaacaaggtttattccacagcaattgcgaaaactcagaagatc
tggacagcatatttagactccatcatgaaggttggtcagatgcagatcttaagacgacag
attaccaatgaattaaattattcctgcaggtttgattccaagcatttggctgctgctttg
gaaaatctcaataaagcaacactggctgacattgaagcacattatcagaacccatcactc
ccttatcctaaagaagacaataccctcttgtatgaaatcacagcttatctggaagcagct
ggcattcacaatccattaaacaagatctacataacaacaaaacgtctgccatactttccc
actgtcaacttcctatttctcatttcccagtttccaaaacttcagtataccagaaattta
ggagtggtgtgcaagcggccagctgatcaaattgactggcttcctttagttctgggactt
cttaccctgttgaaacagtttcactcaagatacacagaacaatttctggctctcatcggt
cagtttattcattcaacgatggaacagtgcacaagccagaagataccagaaatgccggct
gatgtagtgggtgctctcatgttcctggaagattatattcgctacacaaagttaccaaga
aaggttgttgaagcacatgtgcctagcttcatttttgatgaattcagaactgttctatga
DBGET
integrated database retrieval system
