Cuculus canorus (common cuckoo): 104058759
Help
Entry
104058759 CDS
T08597
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104058759 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104058759 (GSPT1)
03012 Translation factors [BR:
cuca03012
]
104058759 (GSPT1)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104058759 (GSPT1)
Translation factors [BR:
cuca03012
]
Eukaryotic type
Release factors
104058759 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
CTLH_Armc9
Motif
Other DBs
NCBI-GeneID:
104058759
NCBI-ProteinID:
XP_053936581
LinkDB
All DBs
Position
15:complement(16988785..17014444)
Genome browser
AA seq
616 aa
AA seq
DB search
MEANGSGSSSDSAPDCWDQADIEPGSGAGAGSAPEAEAQQELLGAAFSRQLNVNAKPFVP
NVHAAEFVPSFLRGGPAPGLPPPSPPPGLPPPAHGAPVETSPEEQTASCEDSNAAVNMEI
SESVVENGETEMSPEESWDHKEETSETELGGGPAGDAGPSEESAQEMMEEEEEIPKPKSV
VAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYL
SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVI
SARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVP
FLKKVGFNPKKDIHFMPCSGLTGANLKEQSEFCPWYIGLPFIPYLDNLPNFNRSVDGPIR
LPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVAPGENLK
IRLKGIEEEEILPGFILCDLNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEV
EITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEG
KTIAIGKVLKLVPEKD
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaacggcagcgggagcagcagcgactcggctcccgactgctgggatcaggcg
gacatcgagccgggcagcggcgccggcgcggggtccgccccggaggccgaggcgcagcag
gagctgctcggggcggccttcagccggcagctcaacgtcaacgctaagcctttcgtgccc
aacgtccacgccgccgagttcgtgccgtccttcctcaggggcggcccggcgcccggcctg
ccgccgccctcgcccccgcccggcctcccgccgccagcccacggtgcacctgtagagact
tctccagaggagcagacagcctcttgtgaagattcaaatgctgctgttaacatggaaatt
tcagaatctgttgtggaaaatggagagacggaaatgtccccagaagagtcatgggaccac
aaagaagaaacaagtgaaacggagctaggaggtggtcctgcaggggatgcagggccttcc
gaagaaagcgctcaggaaatgatggaagaggaggaagaaataccaaaaccgaaatctgtt
gtagcaccaccaggcgctcctaaaaaagagcatgtaaatgtagtattcattgggcacgta
gatgctggcaaatcaactattggaggacaaataatgtatttgacaggaatggttgacaag
agaacacttgaaaaatatgaaagagaagctaaagaaaaaaacagagaaacatggtacctt
tcatgggccttagacacaaaccaagaagaacgagacaaaggtaaaacagtagaagtgggt
cgtgcgtattttgaaactgagaagaaacacttcactattctagatgctcctggccataag
agttttgttccaaatatgattggtggggcttctcaagctgatcttgctgtgctggttatt
tctgcaagaaaaggcgaatttgaaactggatttgagaaaggtggacaaacaagagaacat
gccatgttagcaaaaacagcaggcgtaaaacatttaatagttctgattaataaaatggat
gatccaactgtaaactggagtaatgaaagatacgaggaatgtaaagagaaactggtgcca
tttttgaagaaagttggcttcaatcccaaaaaggatatccatttcatgccctgctcagga
ctgactggagcaaatcttaaagaacagtcagaattctgtccttggtatattggattacca
tttattccatacctggataacttgccaaacttcaaccgttcagttgatggaccaatcagg
ctgccaattgtggataaatataaggatatgggcactgtggtccttgggaagctggagtcg
ggctctatttgcaaaggacagcagcttgtgatgatgccaaacaagcacaatgtggaagtt
cttggaatcctttctgatgatgtagaaactgattcagtagccccaggtgaaaatctaaag
atcagactgaaaggaattgaagaggaagagatccttccaggatttattctctgtgatctc
aataacctgtgtcattctggacgcacatttgatgcccagatagtgataattgagcacaaa
tccattatctgcccaggttacaatgctgtgctgcacatccacacctgtattgaagaagtt
gagataacagccttaatctgcttggtagacaaaaaaacaggagagaaaagtaagacacgg
ccccgttttgtgaaacaggatcaagtatgcattgcccgtttaaggacagcaggaactatc
tgccttgagacattcaaagatttccctcagatgggtcgctttaccttaagagacgagggt
aagaccatcgcaattggaaaagttctgaaactggttccagagaaggactaa
DBGET
integrated database retrieval system
