Cuculus canorus (common cuckoo): 104058777
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Entry
104058777 CDS
T08597
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03420
Nucleotide excision repair
cuca03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104058777 (ERCC4)
03460 Fanconi anemia pathway
104058777 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuca03032
]
104058777 (ERCC4)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104058777 (ERCC4)
DNA replication proteins [BR:
cuca03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104058777 (ERCC4)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
104058777 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
104058777
NCBI-ProteinID:
XP_053936267
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All DBs
Position
15:17619006..17634126
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AA seq
903 aa
AA seq
DB search
MAALLEHESQIFLDLFHQDGLVICARGLGIDRLLLRFLRLYCEPASLVLVLNTGPAEEEY
FIDQLRSDGVVHLPRRVTNEITNNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLITGI
LVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCHVERVMRNLFVRKLY
LWPRFHIAVTSFLEKHKPEVVEIHVSMTPAMLAIQTSILDILNACLRELKRYNPVLEVED
LSLENAIGKAFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTFLNLLE
SLRASEKAFGENSGWLFLDSSTSMFVNARARVYRIADEKLNRKGKVAEKSDVKKENELKR
ELVLETNPKWEALRQVLKEIENENKNSEDLGGPGQVLICASDDRACAQLRECIIAGAEAF
LTRLYNKTFGKDEKATEVWIEDRKAVKSKGNAKTDAGPQAKKAKLAASSKQNKPKKQQDR
TIIQMMGKTEEEKRQELEVEENKELSSSQESIMEETIPEDFHMNLPSDCYYGIFKNPLTI
IHPLQGSSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYGGS
TEEQRYLTTLRKEKEAFEKLIREKASMVIPEEREGRDETNLDLIRDAKPASASTDTRKAG
GQEQKTVQQTIIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSISDLI
GSLNNGRLYTQCISMSRYYKRPILLIEFDPNKPFSLIPRGSLHQEISSNDVTSKLTLLTL
HFPKLRILWCPSPHATAELFEELKQNHPQPNAEAAVAVKADSETLPESEKYNPGPQDFLL
KMPGINAKNCRALMNHVKSIAELVTLSKDELSKILGNTANATQLFDFIHLTYREAISKGK
SKR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctggagcacgagagccaaatcttcctggacctcttccaccaggacggg
ctggtgatctgcgcccgcgggctcggcatcgaccgcctgctgctgcgcttcctccgcctc
tactgcgagcccgccagcctggtgctggtgctcaacaccggccccgccgaggaggagtat
tttattgatcagctgaggtcagatggagttgtgcaccttcctcggcgtgttaccaatgaa
attacaaataatactcgctatgagttttacacacaaggaggagtcatctttgcaaccagt
cgaatccttgtggtagatttcctgacggacagaattcctgcaaacctcattactggcatt
ttggtatacaaagcacacagaatcatcgagtcctgtcaggaagcttttatcttgcgactt
tatcgccagaagaacaagcaaggcttcattaaagcttttacagataatgcagttgcattt
aatactggcttttgccatgtggaaagagtgatgagaaatctttttgtcagaaaactttat
ctgtggccaagatttcatatagcagtgacttcatttttagagaagcataagcctgaagtg
gtggaaatacatgtatcaatgactcctgctatgcttgctatccagacttcaatcctggac
attttgaacgcatgtctgagagaactcaaacgttacaatccagttcttgaagtagaagat
ctatctttagaaaatgctatcggtaaagcttttgacaagaccatacgtcactatttagat
cctctctggcaccagcttggagctaagacaaagtctttggtccaggatttgaagatacta
cgtactttgctcctgtatctgactcagtatgactgtgtcactttccttaatcttctggag
tcgctgagagcgagtgaaaaagcttttggtgagaattcaggttggctgtttctcgactcc
agtacttcaatgtttgtaaatgctcgagctagagtttatcgcattgcagatgagaaactg
aatcggaaaggcaaagtcgctgaaaaaagtgacgtaaagaaggaaaacgaactgaaaagg
gaattggttctagaaactaacccaaagtgggaagctttgagacaagtactgaaagagatt
gaaaatgagaataagaacagtgaagaccttggtggtccagggcaagtgctcatttgtgcc
agtgatgaccgagcttgtgcacagctcagggaatgtattattgctggagcagaagctttt
ttaacaaggctctacaataaaacctttggaaaggatgagaaggcaacagaagtgtggatt
gaggacagaaaagcggtcaagtccaaaggaaatgccaaaactgatgcaggacctcaagcc
aaaaaagccaaactcgctgcttcttcaaaacaaaataaacccaagaagcagcaagaccgg
actataatccaaatgatggggaaaactgaggaggaaaagagacaggagttagaggtggaa
gagaacaaagaattaagcagcagccaagaaagcattatggaggagaccattcctgaagat
ttccatatgaacttgccctcagattgttattatggtattttcaagaaccctctcacaatt
attcatccattgcagggctccagtgatccctatgcactcactcgggttctgcatgaagta
gagccaagatacgttgtattatatgatgcagaactaacttttgttcggcagctggaaatc
tataaggcaagcaggcctggaaaacctttgagggtttatttcctcatatacgggggctca
acagaagaacagcgctatctcacaactctgagaaaagagaaggaggcctttgaaaaactc
attcgagagaaggccagcatggttattcctgaagaaagagaaggaagagatgaaacaaac
ttggacctaataagagatgctaaacctgcctctgcttctactgacacacgcaaagcaggt
ggacaagaacagaagactgttcagcaaactataatagtggatatgcgggaatttcgtagt
gagcttccgtcactgattcatcgtcgcggcattgacattgagcctgttactctggaagta
ggagattacattttaactcctgatatctgtgtagaacgcaaaagtatcagtgatctaatt
ggttctttaaataatggaagactgtatacacagtgcatatctatgtcccgttactataaa
cgaccaattctcctgattgaatttgatcctaacaagcctttctccttgattccacgaggc
tctctacatcaggaaatttccagtaatgatgttacttctaaactaacccttctcacactc
catttcccaaagttacgtattctgtggtgtccctctccccatgctactgcggaactcttt
gaagagttaaaacaaaaccatccccaacccaatgcagaagcagcagtggctgttaaggca
gattctgaaactcttcctgagtcagagaagtataacccaggtcctcaggactttctatta
aaaatgccaggaattaatgcaaaaaactgccgtgccttaatgaaccatgttaaaagcatt
gcagagctagtgacgctgtccaaggatgaactctccaaaattttgggtaacaccgctaat
gccacacaactcttcgactttattcacctgacctacagagaggcaatatctaaaggaaaa
agcaaaagatga
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