Cuculus canorus (common cuckoo): 104058801
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Entry
104058801 CDS
T08597
Symbol
FARSB
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104058801 (FARSB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cuca01007
]
104058801 (FARSB)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuca03016
]
104058801 (FARSB)
Enzymes [BR:
cuca01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
104058801 (FARSB)
Amino acid related enzymes [BR:
cuca01007
]
Aminoacyl-tRNA synthetase
Class II (U)
104058801 (FARSB)
Transfer RNA biogenesis [BR:
cuca03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104058801 (FARSB)
Prokaryotic type
104058801 (FARSB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
zf-Vps39_C
fvmX5
Motif
Other DBs
NCBI-GeneID:
104058801
NCBI-ProteinID:
XP_053930410
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All DBs
Position
9:complement(6582871..6623299)
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AA seq
589 aa
AA seq
DB search
MPTVGVRRDLLFGALGATYTDEEFNELCFEFGLELDEVTSEKDIISKEKGEEKAKGASEI
IIYKIDVPANRYDLLCLEGLVRGLQVFKERINLPRYEKIIPAEGEGQRLIITEQTVQVRP
HAVAAVLRNITFTKERYDSFIDLQEKLHQNICRRRALVAIGTHDLDTISGPFTFTAKPPS
EIKFKPLNQSQEYTASQIMDLYRTDSHLRHYLHLIENKPLYPVIYDSNGVVLSMPPIING
DHTKISVNTTNVFIECTGTDITKAKIVLDIIVTMFSEYCEKPFSVEAVEVVYPNGKTHIY
PELAYRKEKVKAELINKKIGISETPSSLAKLLTRMCLNSHVIGNGNHIEVEIPPTRADII
HACDIVEDAAIAYGYNNIQMTIPKTYTIANQLPLNKLTELLRHELAAAGFTEALTFALCS
QEDIADKLGMDISATSAVRIANPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISD
IVVKDPTTDVGARNYRHLCAVYYNKTPGFEIIHGLLDRVMQLLEVPPDEDDGYTIKAAEG
SAFFPGRCAEIFAKGQIVGKLGVLHPDVITKFELTMPCSALEINIEPFV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgtcggcgtgaggcgggacctgcttttcggggcgctgggcgcgacctacact
gatgaagaatttaatgagctttgctttgagtttggtttggagcttgatgaagttacatct
gagaaagacattataagtaaagaaaaaggagaagaaaaggcaaagggtgcatctgaaatc
attatctataaaattgatgttcctgccaaccgttatgaccttctttgccttgaagggttg
gtccgaggactgcaggtctttaaagaaaggataaatctccctaggtacgaaaagataata
ccagccgagggtgaaggtcagaggctgattatcactgaacagactgtccaagtccgtcct
catgctgtagctgcagtccttcgcaatataacttttaccaaggaacgttatgatagtttc
atcgacctccaggaaaaactacaccaaaatatttgcaggagaagagccttagtagccata
ggtacccatgacttggacaccatctctggcccatttacttttactgctaaaccaccttca
gaaattaaattcaagcccttgaatcagtcccaggagtacacagcttcacaaattatggat
ctgtataggactgacagccaccttcggcactacttacacctgattgaaaacaaaccactt
tatcctgttatttatgacagcaatggtgttgttctgtccatgccaccgatcatcaatgga
gatcatacaaaaataagcgtaaacaccacaaatgtgtttattgaatgcactggcacagat
attacaaaggcaaaaattgttcttgatattatagtcacgatgtttagtgaatattgtgag
aagccattcagtgttgaagcagtagaagtagtttatcctaatggaaagacccacatctat
ccggaactggcttaccgaaaagaaaaagtgaaagctgaactcattaacaagaaaataggg
atcagtgaaactccatcaagccttgcaaagctgctgactaggatgtgtttgaactcacac
gtcatagggaatgggaaccacatcgaggttgaaatccctcctaccagagcggacattatc
catgcatgcgatatcgtagaagatgcagcaatagcttatggttataacaacattcagatg
actattccgaaaacgtacaccatagctaatcaactcccccttaataagctcacagaactt
ctgagacacgaattggcagctgctggattcactgaagcgctcacttttgccctgtgttct
caagaagacattgcagataaacttggcatggatatctctgcaacaagtgcagtgcgcata
gcaaaccccaaaactgcagaatttcaggtggcacgtacaaccctccttcctgggctcctg
aaaaccattgctgccaaccgaaagatgcccttgcctctcaaactctttgagatttctgac
attgtagtaaaagatcctactacagatgtaggtgcaagaaactacaggcatttgtgtgca
gtttattacaacaagaccccagggtttgagattatccatggtttgctggacagggtcatg
cagcttcttgaagtaccacccgatgaagatgatggctacacgatcaaggcagctgaaggc
tctgctttctttcctggtcgttgtgctgagatctttgccaaaggtcaaattgttgggaaa
cttggcgtcctacaccctgatgttatcaccaagtttgagctcaccatgccgtgctctgca
ctagagatcaatattgaaccctttgtgtga
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