Cuculus canorus (common cuckoo): 104058818
Help
Entry
104058818 CDS
T08597
Symbol
CLIP1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
104058818 (CLIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104058818 (CLIP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cuca04812
]
104058818 (CLIP1)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
104058818 (CLIP1)
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
104058818 (CLIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Fungal_TACC
ApoO
DUF7491
Motif
Other DBs
NCBI-GeneID:
104058818
NCBI-ProteinID:
XP_053938064
LinkDB
All DBs
Position
17:10126050..10199994
Genome browser
AA seq
2216 aa
AA seq
DB search
MSMLKPSGLKAPSKTIKHGGTLLKTPASVAAAPAEKAAPSDKAPSTTTADAHEEFVDDFR
VGERVWVNGNKPGYIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRGIFT
RPSKLTRKVLTEDEANGTQTAHASRATSPTSTSAASVVSSSAAALPPSGIPHKTTPLAAK
EHSTPSQISNLSKTASESISNLSEAGSLKKGERELKIGDRVLVGGTKAGVVRFLGETDFA
KGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKTTVRK
VVVTPTALKRSPSASSLSSLSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKE
KQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEA
ADREKVELLNQLEEEKRKVEDLQFLVEEESITKGDLERKRQISEDPENTQTKLEHARIKE
LEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRMKEVAELRGRLESSKHV
DDVDTSLSLLQEISSLQERMATVSKEHQNEVNSLKEKFGISEEALQKEIKSLSASNERMA
KENESLKTKLDHANKENSDVIELWKSKLESAIASHQQAMEELKVSFSKGVGAQTAEFAEL
KTQIEKIKLDHENEMANLKQKQENEKSQHLKELESLKAKLLAVTEEKEQSLESLKTKLES
VEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYNEQTKVIDSLTPQIKAAEEKLLDLAAL
QKANSEGKLEIEKLSKQLEAAEKQIQDLEAEKVEGSSKASNLAKELQGKEQKLLDLEKNL
SAVNQVRDSLEKELQVLKEKFTSAADEAENVQQSMQETIKKLNQKEEQFALLSSELEQLK
SSLTVMEKKLKEREEREQQLIEAKVKLENDIAEIMKSSGDSSAQLTKMNDELRLKERQLE
QIQLELTKANEKAVQLEKNVEQTTQKAEQSQQETLKIHQAELKNMQDQLTEMKKQIETSQ
NEYKDLQAKYEKETSDMTAKHDADIKGFKQNLLDAEEALKIAQKKNDELETQAEELKKQA
EQAKSLSSVLASARKEIELMSDKMRGLISEKETLAQEGNTLKLERGSLSSKLLELESKIS
LMQQDQEELWTKNEELNAENKKILKEKEEVEAKNQQESTEKLALISEKSKLLSEIEATQA
ELLKVTQENYALRSSESTLLQQLRELKANKDAMDVVCQKHIKEREELEHYQKKLLEEKDG
VIKDKDDVIQKLGSSCEVLAREQKELLQEVSALTAERDSALGKHSDLKNTHIALKNEMDG
LLQTSQSLQSEKESLLKNVDDLRVSLDNMVSENQALRARTEEVQKELETKHEEHEKVMKD
NLELKDSLASLSCLLEEIKASRERSNLECAQLLQEKEALSSSEQRLLTERQELENENKAI
AEKLAKATADAVLAEKVFTEKINELNLEKESVFRKSLQFEKHNEALLQEKDELESKYSKL
LDENESSAEAISDMKREHELVVSAKRALAQENTVLRDSVEALKEELSKKTLENQELIACK
CDLSSLLKEAQDARRTLENELAAVSHAKEVLSSSFNTCSSDREMLTRERSELQDKCQKIN
GELEVLKENLTTEKEARKVDKESFLLERMELEHNISSLEKELEELREKNKEFLTEKEFLV
QEKEKSETKLVEIMKEKGALCAETEQLASSIEQLKSDFASLSTSKAELQDSHSRVSETLD
DLRQRHEVTEKERMKLLQEKDNLLAERKSLVFMKEEILQEKEKLSKDYCKLHEEVALLEQ
TNSDLSGKLLVFQGKNQMLQEEVNNLALKLKEIETLQAQTVAQKIEAAKMAEDVLQTVEK
VTKEKDAIHKEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELNKSKELLNLENKK
VEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQL
LEMKKSLPSNTLRESTLKKEIDEERASLQKSINVTSALITQKDEELEKLRNEITVLRGEN
ASAKTLQSVVKSLESDKLKLEEKVKSLEQKLKENNEQPLTITGSSGDAANLLQDEIAKEK
QIDFLNSVIVDLQRRNEELNLKIQRMCEAALNGNEEEINNYDSEEESLSKKKPRLFCDIC
GCFDLHDTEDCPTQAQMLEEPPHSAYHGSRREERPYCDTCEMFGHWTADCNDDETF
NT seq
6651 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgttaaaaccaagtggacttaaggctccctcaaagaccatcaagcatgggggt
acattgctgaaaacacctgcatcagttgcagctgctccagcagaaaaagcagctcccagt
gacaaggccccaagcacaaccactgcggatgcgcatgaagagttcgtggatgatttcaga
gttggtgagcgtgtttgggtcaatggaaataagcctggatatattcagttcctcggtgaa
acacaatttgctccaggacaatgggcagggattgttctagatgaaccaattggtaagaat
gatggttccgtggctggagttcgctatttccagtgtgaacccttgagaggaatatttaca
agaccatcaaaattaacaagaaaagtgctgacagaagatgaagccaacggtacacagaca
gctcatgcttctagagctacatcaccaacttctacatcggctgctagtgtggtgtcttca
tccgctgctgcgcttcctccttcaggaattccacataaaactacaccacttgctgctaag
gaacattcaactccttctcaaattagcaatctttcaaaaactgcaagtgaatctatatca
aacctctctgaagctggatcactaaagaaaggagaaagggagctcaaaattggagatcgt
gttctggttggtggaacaaaagctggggttgtgcgtttcttgggagaaaccgattttgct
aaaggcgaatggtgcggagtggaactggatgaacctctgggaaagaatgatggagccgtt
gctggaacaaggtattttcagtgtcagccaaaatacggtttgtttgctccagtccacaaa
gtgacgaagattggattcccgtcaaccacaccagcaaaagccaagacaactgtgcgaaaa
gtagttgtgactcccacagccctgaaacgtagcccgagtgcatcttctctgagctctctc
agttctgtggcatcttcagtaagcagcaagccaagccgtacaggactattgacagaaaca
tcctcccggtatgcaaggaagatttctggtaccacagccctgcaggaggcactgaaggag
aagcagcaacacattgaacagctcctggcagaaagggacctggagagggcagaagttgca
aaagcaaccagccacgtaggggaaatagagcaggaattagcacttgttcgtgatggacat
gatcggcatgtactggagatggaagcaaaaatggaccagctacgagctatggtggaggct
gctgacagggagaaagtggagcttctcaatcagcttgaggaggagaaaaggaaagttgaa
gaccttcagttccttgtggaagaggaatccattaccaaaggagacctagagcgaaagagg
cagatttcggaagacccagaaaatacgcagaccaaactggagcatgcccgcattaaggag
cttgaacagagcctgctctttgaaaagaccaaagctgacaaactccagagggagttagaa
gacactagggtggccacggtatcggaaaaatctcgcatcatggaactagaaagagatcta
gcattgcggatgaaggaagtagctgagcttcgagggagattagagtctagtaaacacgtg
gatgatgtggacacttctctttcattgttacaagaaataagttctttgcaagaaagaatg
gcaacagttagcaaagaacatcagaatgaagtgaattcactgaaagagaagtttggaatt
agtgaagaagcattgcagaaagagattaaatcgctttcagcttcaaatgagagaatggca
aaggaaaatgaatccttgaaaacgaagcttgatcatgccaacaaggagaattcggatgta
attgagctgtggaaatcaaagctggaatctgcaattgcctcccatcagcaagcaatggaa
gaactaaaagtttctttcagcaaaggtgtaggggctcagacagcagaatttgcggagtta
aagactcagattgagaagattaaattagaccatgaaaatgaaatggcaaatttaaagcag
aagcaggaaaatgaaaaatctcagcatttaaaagagcttgaatcactgaaagcgaaactg
ttggcagtcacagaggagaaggagcaaagcctggagagcctgaagaccaagctggaaagt
gtggaagatcagcatctagtagaaatggaagacactttaaacaaattgcaggaagctgaa
ataaaggtaaaggagctagaggtactgcaagccaagtacaatgaacaaaccaaagttatt
gatagtcttacaccacagatcaaagctgctgaagaaaagcttttggaccttgctgcactt
cagaaagccaattctgaaggtaaattggaaatcgagaaacttagcaagcagcttgaggca
gctgagaaacaaattcaggatttagaggctgaaaaggttgaaggaagtagcaaggccagt
aatctggccaaagaactgcagggcaaagagcaaaagcttcttgaccttgagaaaaacttg
agtgcagtaaatcaagttagagattctttggaaaaggaacttcaagttttgaaagaaaag
tttactagtgcagctgatgaagcagaaaacgttcaacaaagtatgcaagaaacaataaaa
aaattaaaccaaaaggaagagcagtttgcgctcctgtcttcagagctggaacagctgaag
tctagtttgactgtgatggagaagaaattgaaggaacgagaagagagagaacagcagctg
attgaagctaaagtcaaacttgaaaatgatattgcagagatcatgaagtcttcaggagac
agctctgcccagcttacgaaaatgaatgatgagctccgcttaaaagaaaggcagttggag
caaatacaacttgagcttacaaaagcaaatgaaaaggctgttcagcttgagaaaaatgtg
gagcagacaacacagaaagctgagcagagtcagcaagaaactctcaagattcatcaagca
gaactgaaaaatatgcaggatcaactaacggagatgaaaaagcaaatcgagactagccaa
aatgagtacaaggatcttcaggcaaagtatgaaaaagaaacttcggacatgactgctaag
catgatgcagatatcaaagggtttaagcagaacttgctggatgcagaagaggcgctgaaa
attgcacaaaagaagaatgatgagttagaaacacaggctgaggagctgaaaaagcaagca
gaacaggccaaatccttaagttctgtgttagcatcagccagaaaagagattgaactaatg
tcagacaagatgaggggtttgatatcagaaaaagagactctggcacaggaggggaatact
ttaaaattagagagaggttccttgtcatcaaaacttctagaactggaatcaaagatttca
ttaatgcaacaagatcaagaagaactttggacaaaaaatgaggaacttaatgcagaaaac
aaaaaaatcttaaaagagaaggaagaagttgaggccaaaaaccagcaggaaagcactgaa
aagctagcactaatttctgagaagagcaaattactctctgaaatagaggcaacacaggca
gaacttctgaaggtaactcaagaaaattatgcgctccggtcttcagagtcaaccttgctc
caacagttgagagagcttaaggccaacaaagatgccatggatgtggtatgtcagaagcat
atcaaagaacgagaagaactggagcattatcagaagaaacttttggaagagaaagatgga
gttattaaagacaaagatgatgttattcagaagctgggaagttcttgtgaggtcctggcc
agagaacagaaagagctactgcaagaagtgtcagctctgactgcagagagagattcagcc
ctaggtaaacactcagatcttaaaaatacgcatatagccttaaaaaatgaaatggacggt
ctattgcagacaagtcagagtctgcagtctgagaaggagtcgctacttaaaaatgtagac
gacttgcgtgtgagtttagacaatatggttagtgaaaaccaagcattaagagcgaggaca
gaagaggtgcagaaagagcttgagactaaacatgaagaacatgaaaaagtgatgaaagac
aatctggagttaaaggattcccttgctagtctctcctgtcttcttgaggaaattaaagcc
tcaagagagagatccaatttggaatgtgctcagttacttcaagagaaggaagctctttct
tcatcagagcaaaggcttttgactgaaaggcaggaacttgaaaatgaaaataaggcaatt
gcagaaaagcttgctaaagccacagcagatgctgtacttgctgagaaggtttttactgag
aaaataaacgaactgaacttagaaaaagaatctgtttttcgtaagtcattgcaatttgaa
aaacacaatgaagctcttcttcaagagaaggatgaactggagagcaaatactcaaagctc
cttgatgaaaatgagtcttctgcagaggcaatttcagatatgaagagggaacatgaactg
gttgtctcagccaaaagagctttggcccaagagaataccgtgctccgtgattctgttgaa
gccctcaaggaagagctaagtaagaagactctagaaaaccaagagctaatagcctgtaaa
tgtgacctttccagtcttctgaaagaggcccaggatgccagaagaacattagaaaatgaa
ctggctgctgtatcacatgccaaggaggtcctatcatcttcattcaatacctgctcctct
gatagggaaatgctgaccagagagaggagtgaactgcaagataagtgtcagaaaataaat
ggagagcttgaggttttgaaagaaaacttaaccacagagaaggaagccagaaaagtggat
aaggaatcatttttgttggaacggatggaacttgaacacaacatcagctccttagagaag
gagctagaagagctgagagagaaaaataaagaatttctaactgagaaggaatttttagtt
caggagaaagaaaaatctgaaactaaactggtggaaataatgaaagaaaaaggagccctc
tgtgcagagacagagcagcttgcttccagcattgaacaactgaagagtgactttgcttcc
ttgtctacgtcaaaagccgagctccaggactcgcacagccgtgtctccgagacattagat
gatcttcgacaaaggcatgaagtgacagagaaggagagaatgaagttacttcaggaaaag
gacaacctacttgctgaacggaagagtctggtcttcatgaaggaagaaatactgcaagag
aaggagaaactctccaaggattattgtaaactgcacgaggaagtagcacttttagaacaa
actaatagtgacctctcaggtaaattgctggtctttcagggcaaaaatcagatgctgcag
gaagaggtgaacaatctggccttgaaactaaaagaaattgagactctccaggcccaaaca
gtagcacaaaaaatcgaggctgccaaaatggcagaagatgttttgcagactgtggagaag
gtgaccaaagagaaggatgccattcacaaagaaaagattgaaactctggcctctttggag
aactctagacagacaaacgagaagctacagaatgaattggacatgcttaagcaaaacaac
ctgaagaatgaagaggaacttaataaatcgaaagagcttctaaatctggagaacaagaag
gtggaagaacttaaaaaagaattcgaagcgctgaagctggcagctgctcagaagtcccag
cagcttgcggctttgcaagaggagaacgtgaaacttgccgaggagctgggcaggagcagg
gacgaagtcacaagtcatcagaagctggaagaggagagatcagtactcaataaccagttg
ttagagatgaaaaagagcttgcccagtaacactttaagagaatcaacattaaaaaaagaa
atcgatgaagagagagcatctttacaaaaatccatcaatgttactagtgccttgatcaca
caaaaagatgaggaactggaaaaactcagaaatgagatcacggtgctccgtggagaaaac
gcttctgcaaaaaccttgcagtcagtggttaagtcactggagtctgataaattgaaactt
gaggaaaaggtgaagagcttggagcaaaaactcaaggaaaacaacgaacagcctttaact
ataactggctcctcaggtgacgctgccaatctacttcaagatgaaattgcaaaagagaag
cagatcgacttcctgaattcagtaatcgtagatctgcagaggaggaatgaagaactgaac
ttgaaaatacaaagaatgtgtgaagcagccctcaacggcaatgaagaggagataaataac
tatgacagtgaggaagaaagcctgtcaaagaagaaacctcgtctcttctgtgatatctgt
ggctgctttgatcttcacgacactgaagactgcccgacccaagcacagatgctggaggag
cctccgcactcggcttatcatggcagcaggagagaagaacgcccctactgcgatacctgt
gagatgtttgggcactggacagccgactgtaacgacgatgagaccttctaa
DBGET
integrated database retrieval system
