Cuculus canorus (common cuckoo): 104058895
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Entry
104058895 CDS
T08597
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
104058895 (TFIP11)
Spliceosome [BR:
cuca03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104058895 (TFIP11)
Other components
Complex C specific factors
104058895 (TFIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
104058895
NCBI-ProteinID:
XP_009558777
UniProt:
A0A091G3P0
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All DBs
Position
17:8294412..8304821
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AA seq
827 aa
AA seq
DB search
MSMSHLYGTDGDDGVEMENFEVSDWDLQNEFNPHRQRHRQSKEEATYGIWAERDSDEERP
SFGGKRSRDYSAPVNFISAGLKKSAAEDMSEEDSDEDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFVGGTKSFVDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTSQSLQDFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRINKQLSTPQKEISQVKVIDMTGREQKVYYSYSQISHKHNIPDNNPQQPLGKDS
KLQGFALPELEHNLQLLISITEQEIIQSDRQLQYERDMVVNLTHEIQKMSEVLSHEEKAI
SNLSKVLEMVEECERRMQPGCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKDYFKNWDPLKDCTYGTEIIAKWKNLLENDQLLSHGGQDLSTDAFHRLMWEIWMPYVR
NIVAQWQPRNCGSMVDFLDSWVNVVPIWILENILDQLIFPKLQKEVESWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGMAASSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtcacacctgtatggcaccgatggggatgatggtgtggagatggagaacttt
gaggtatcagactgggacctgcagaacgaattcaacccccaccggcagcgccaccggcaa
agcaaggaggaggccacctacggtatctgggcagagcgtgactcggatgaggagcggccc
agctttggcggcaagcgctctagggattactcggcccctgtgaacttcatcagcgctggg
ctgaaaaagtcagcggctgaggatatgtcagaagaagactctgatgaagatgaaaagcct
gttaagcaggaggaaatccctaaagagtttgtgccgaagaagttaaaaacaggtggtaat
ttcaagccaagtcagaaaggctttgtaggagggacaaaatctttcgtggattttggcagc
tgggagagacacactaaaggaattggacagaagcttctccagaagatgggttacgtccct
ggaagaggtctcggaaagaatgctcaaggtatcatcaatccgattgaggccaaacagaga
aaaggcaaaggagctgttggggcatatggctccgaaagaaccagccagtctttgcaagac
ttccctgttgtggactcagaagaagaagctgaagaggaatttcaaaaagagctcagtcag
tggcggaaagatccgaatggaggcaagaaaaagcccaaatacagctataagacagtagaa
gaactgaaagccaaaggcaggatcaacaagcagctctcaacccctcagaaggagatatct
caagtcaaggttatagacatgacgggccgggaacaaaaggtttattacagctacagtcaa
attagccataagcacaatatcccagataacaatcctcagcagccactgggcaaagactcc
aagctccaaggctttgctttgcctgaactggagcacaacctccaacttcttatcagcatc
acggagcaggagatcatccagagcgaccggcagctgcagtatgagagagacatggttgtc
aacctgacccatgaaatacagaagatgtctgaagttctctcacatgaggagaaggcaatt
agtaatctcagcaaggtgctggagatggtggaagagtgtgagagacggatgcagcccggc
tgtgaaaaccccttaactttggatgagtgtgcgaagatttttgaaacgcttcaggacaag
tactatgaagagtaccgaatgtctgatcgggtagacctggcagtagcaatcgtctatcct
ctcatgaaagattacttcaagaactgggatcctctcaaggactgcacgtacggcacagag
atcatagccaagtggaagaaccttttggaaaatgatcagctgttatcgcatggtgggcag
gatctgtcaacagatgcttttcacagactgatgtgggaaatctggatgccatatgtcaga
aacatagtggcgcagtggcagccgaggaactgtggatccatggtggatttcttggatagc
tgggtaaacgttgttcctatctggatactggaaaacattctggatcagcttatcttcccc
aagctacagaaagaggttgaaagctggaatcctttgacagacacagtcccaatccattcg
tggatccatccctggcttcccctgatgcaggcacgattggagccgctgtattctcccatc
cgaaacaagctggcgaacgcactgcaaaagtggcatcccagtgactcctcggccaaactt
atccttcagccctggaaagatgtgttcacccctgggtcgtgggaggctttcatggtcaaa
aacattgtgcctaaactaggaatgtgtttgaatgaactcatcataaaccctcaccagcag
catatggacgccttctactgggtgattgactgggaggggatgatttctgtctccagtctt
gttgggctgctggagaaacacttcttcccgaagtggctgcaggtgctgtgctcgtggctt
agtaacagccccaactatgaagagattaccaagtggtacttgggttggaaatccatgttc
tcagaccaagtgttagcgcatccatccatcaaagacaaatttaatgaagctcttgatatc
atgaatcgggctgtctcttccagtgttggtggttacatgcaaccaggtgctcgagagaac
atcgcctaccttactcacaccgagcggaggaaagacttccagtacgaagccatgcaggag
cgccgggaggctgagaacatggcccagcgtggcattggcatggctgccagctctgtgccc
atgaactttaaggacctaattcagacgaaagcggaggagcacaacattgttttcatgcct
gtgattggaaagcggcatgaagggaaacagttgtatacgtttggacggatcgtcatttac
attgacagaggtgttgtgtttgtgcaaggagaaaagacctgggtgccaacatctctccag
agtctcattgacatggcaaagtga
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