Cuculus canorus (common cuckoo): 104058905
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Entry
104058905 CDS
T08597
Symbol
USP30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104058905 (USP30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cuca01002
]
104058905 (USP30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104058905 (USP30)
04121 Ubiquitin system [BR:
cuca04121
]
104058905 (USP30)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104058905 (USP30)
Peptidases and inhibitors [BR:
cuca01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104058905 (USP30)
Membrane trafficking [BR:
cuca04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
104058905 (USP30)
Ubiquitin system [BR:
cuca04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104058905 (USP30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
104058905
NCBI-ProteinID:
XP_053938488
LinkDB
All DBs
Position
17:complement(9110427..9121134)
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AA seq
503 aa
AA seq
DB search
MLPAADGAVRRVLRAGAVARHKVMKNWGVIGGVAAAIAAGMYVLWGPITERRRRRRGLVP
GLLNLGNTCFMNSLLQGLSSCPSFIKWLEEFTAQYKTEQNQPTEHRYLSLTLLHLLKALS
CQEVTEDDVLDASCLLQVLRMYRWQISSFEEQDAHELFHVLTSSLEDERDRQPRVTHLFD
VQSLEQPEITQKQISCRTRGSLPPVTNHWKSPHPFHGRLTSNMVCKHCEHQSPVRYDTFD
SLSLSIPAAVWGRPMTLDHCLHHFISSESVKDVVCDNCTKIQAEGTLNGQSIEKQRTTFI
KQLKLGKLPQCLCIHLQRLSWSNQGTPLKRHEHVQFNEFLTMDIYKYRIPVHKSSQNELN
QKTSEDTTPGTKDGMAVKPSDVQQPPGTKPLFMNGACSPSLTSSGTFPLVAFPECSSPVY
LYRLMAVVVHHGDMHSGHFVTYRRSPPSPKSPLSVSSQWLWISDDTVRKASLQEVLSSSA
YLLFYERVHSRVQHQSLQFRAEE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgcggccgacggcgcggtgcggcgggtgctgcgggccggggcggtggccagg
cataaagtgatgaagaactggggtgtcatcggcggggtggcggctgccatagcggcgggg
atgtatgtgctttgggggcccatcaccgagaggagacggcgccggagagggctcgtacct
ggcctccttaacttgggaaacacgtgttttatgaactccctgctgcaaggcttatcctcc
tgcccctccttcatcaagtggctggaggagtttacagctcaatacaagacagagcagaac
cagcccactgagcatcggtacctgtcacttactctgctgcatctcctaaaagctttatcc
tgtcaagaggtaacagaagatgatgtcctggacgccagctgcctgttacaagttctaagg
atgtataggtggcagatctcatcgttcgaagagcaggatgctcatgagctatttcatgtc
ctcacctcttcattagaagatgaacgggatcgtcagccacgtgtgacacatttgtttgat
gtgcagtcgctggagcagccagaaataacccaaaagcaaataagctgcagaacaagaggg
tctcttccccctgtgacaaatcactggaaatctccgcatccttttcacggaaggctgacc
agcaacatggtttgcaaacactgtgaacatcagagccctgtgcggtacgataccttcgac
agtctctcactgagtattcccgcagcagtgtggggtcgtcctatgacactcgaccactgc
ctccatcatttcatctcctctgaatctgtaaaggatgttgtgtgtgacaactgcactaaa
attcaggcagaagggactctgaacggacagagcatagaaaaacagagaacaacattcatt
aagcagttaaagttaggaaagctccctcagtgtttgtgcatccatctgcaacgactgagc
tggtcaaaccaaggcactcctctgaaacgtcacgaacacgtacagttcaatgagttcctc
accatggacatctacaaataccgcatccctgttcataaatcaagccagaatgagttgaat
cagaaaacctctgaagacacaacacctggtacaaaagatgggatggcagtaaaaccttca
gatgtgcaacagccacctggtactaaaccgctgtttatgaatggcgcctgctccccttca
ttaacatcctcgggaacttttccacttgtagcattccctgaatgcagttcccccgtatac
ctttatcgtctgatggcagttgtagttcatcatggagacatgcactctggacactttgtg
acctaccgccgctctccaccatctcccaagagtccactctctgtcagcagccagtggcta
tggatttcggatgacactgttcgcaaagctagtttgcaggaagtcctttcttctagtgct
tacctgctgttttatgagcgtgttcactcgagggtacagcaccaaagcctacagtttcgg
gccgaagagtga
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