Cuculus canorus (common cuckoo): 104059026
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Entry
104059026 CDS
T08597
Symbol
PPFIA4
Name
(RefSeq) liprin-alpha-4 isoform X1
KO
K26226
liprin-alpha
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104059026 (PPFIA4)
Membrane trafficking [BR:
cuca04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104059026 (PPFIA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF2576
DUF2087
Motif
Other DBs
NCBI-GeneID:
104059026
NCBI-ProteinID:
XP_053943307
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Position
24:complement(6384908..6459032)
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AA seq
1233 aa
AA seq
DB search
MMCEVMPTISEGDPLGPPQGSETDADFEQLMVNMLDERDKLLDTLRETRETLSVTQSRLQ
ETLRERDQLQRQLNSALPQEFATLTRELSACREQLLEREEEISELKAERNNTRLLLEHLE
CLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERV
ATLEEQLVDAHRQVASLQQGAVREAPAGERDEREPKEPAQKLPWKRLSNGSVHPDDEAGR
VVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREA
LAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLESELANKESLHRQCEEKARHLQELL
ELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAKERHGSIEEHLRQLESQLEEKNQELA
RARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLLQELENTQKQIE
EHQHDKRRLSDEIDKLRLEVDQLKTRSGTFVESVHARSHMGSTTDLRFPLSAVVHAPAEP
FGAAPGLPRAQKGRFATRREEPAKDWEQAQAGSVLATGPHAFDSDPEISDVDEDDRETLF
SSMDVLSPSGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEG
LNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLSSRSAAQDLDRMGIMTLPSDLRKH
RRKLLSPAARDESREDKTTIKCETSPPSSPRTLRLEKLGHPALSQEDGKSSLEEQASNPS
SNSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQVMLTDVEVGMQDPLGL
GKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANV
KSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHE
EMENMATSTKTDTEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLD
HLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQ
VIHWIQSIGLREYANNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFN
NLLALGTDRRLDDSDDKTFRRTPSWRKRFRPRDVHSINMLSGSAETLPAGFRVTSLVPLP
PPSAPPSAKKMPPEVGASGSPRLETSTVRTYSC
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaagtgatgcccaccatcagcgagggggaccctctgggtcccccccagggc
tccgagacggatgccgacttcgagcagctgatggtgaacatgctggatgagagggacaag
ctgctggacaccctgcgggagacccgggagacactctctgtcacccagagccgcttgcag
gagaccctacgggagcgtgaccagctccagcggcaactcaactcagccctcccacaggag
tttgcaacgctgacacgggagctcagtgcatgccgggagcaactcctggagagggaagag
gagatctcagagctgaaagctgagcgcaataacacccggctcttgctggagcacctggag
tgcctggtgtcgaggcatgaacggtccctgaggatgaccgtggtcaagcgtcaggcccag
tcaccgtccggggtttccagtgaggtcgaggtgctcaaggcgctcaagtcactctttgag
catcacaaggcgctagatgaaaaggtcagggaacgcctgcgagcagctttggagcgagtg
gcaaccttggaggagcagctggtggacgcccatcggcaggtggcatctctgcagcaaggc
gccgtgcgagaggccccagccggagagcgggacgagagggaaccaaaggagccagcgcag
aagcttccctggaagcggctctccaacggctccgtccacccagatgatgaggcagggcgg
gtggtggagctgcaggagctcctggagaagcagaatttcgaagtggtccaggccaaggag
cgcatctctgcgttggctgccagtgtcgccgagctggaggaggatttgggcaccgccagg
aaggatctgatcaaatccgaggagatgagcagcaagtaccagagggacctccgggaggca
ctggctcagaaagaggacatggaggagaggatcactacgctggaaaaacgctatctggca
gcccagcgagaagccacttccatccatgacctcaatgacaagctggaaagcgagttggcc
aacaaggagtccctgcaccgccagtgcgaggagaaagcccggcatctgcaggagctgctg
gagctggcagagcagaagctgcagcagacaatgcggaaggcagagacgctgcccgaggtg
gaagcagagctggcccagcgcattgctgccctcactaaggcaaaagagaggcacgggagc
atcgaggagcacctccggcagctggaaagccagctagaggagaagaaccaagagctggcc
agggcccgccagcgggagaagatgaacgaggagcacaacaagcggctctcagacactgtg
gatcgtctgctgagcgagtccaatgagcggctgcaactgcatctcaaggaaaggatggca
gccttggaggagaagaacacattgttacaagagctggaaaatacccaaaagcagatagag
gaacaccagcatgacaagcgacggttgtctgatgagattgacaaactgaggctggaggtc
gatcagctcaagaccagaagtgggacgttcgtggagagtgtgcatgcaaggtcccatatg
ggcagcaccacagacctgcgcttcccactgagtgctgtggtccatgcccccgctgagccc
ttcggagcagccccgggcctgcctcgggcacagaagggccgctttgccacccggcgagag
gagccagccaaggactgggagcaggcccaggcaggaagcgtcctggccacagggcctcac
gccttcgatagtgaccctgagatctctgatgtggatgaggatgaccgtgagacgctcttc
agctctatggatgtgctctctcccagtgggcactcggatgcccagacgctggctatgatg
ctccaggagcagctggatgccatcaacgaggagatcaggatgatccaagaggagaaggag
tctactgagctccgtgcagaagaactggagacccgtgtgacgagcggcagcatggagggc
ctcaacctcacccagctctgcaaaagggcttccatccccacctcgctgacggccctgtcc
ctggccagctcctccccaccgctcagcggccgctccacgcctaagctctcctcccgcagt
gccgctcaggacctcgaccgcatggggatcatgacgttgcccagcgacttgaggaagcac
cggaggaaactgctatctcctgcagctcgggatgaaagccgagaggataaaaccaccatc
aaatgcgagacatcccctccatcctcacccaggacgttgcggctggagaagctgggccac
cctgcactgagtcaggaggatgggaagagctcgctggaggagcaggccagcaaccccagc
agcaacagcagccaggactccctgcacaagggctccaagaggaaggggatcaaatcctcc
atcgggcgcttgttcgggaaaaaagagaagggtcgcttgattcagctgagcagagaaggg
gccacggggcaggtgatgctaaccgatgtggaggtgggcatgcaggaccctctgggactt
ggcaagctgggtgctcaggctgagaaggatcggcgcctgcggaagaaacacgaactcttg
gaagaggctcggaggaaaggattgccctttgctcactgggatggccccaccgttgtctcc
tggctggagctctgggtggggatgccagcgtggtacgttgctgcttgccgagccaatgtg
aagagcggagccatcatgtcagccctatccgatactgagatccagagggagattggcatc
agcaacgcgctgcatcgcctgaagctgcgtctggccatccaggagatggtttcgctcacg
agcccctcagcaccacccacctcacggacgtcctccggaaacgtctgggtcactcatgag
gagatggagaacatggcaacttccaccaagacggacacagaggaaggcagctgggcacag
acactggcctacggggacatgaaccacgagtggattgggaatgagtggctgcccagcttg
ggactcccacagtatcgcagctacttcatggagtgtcttgttgatgcacggatgctggac
cacctcaccaagaaagatctcagggtgcacttgaagatggtggacagcttccaccgcacc
agcttgcagtacggcatcatgtgcctgaagaggctcaactatgaccgcaaagagctcgag
aggaggcgagaagagacccaacatgaaatcaaagatgtcttggtgtggaccaatgaccag
gtcattcactggatccagtccatcgggctccgcgagtatgcaaacaaccttgttgagagt
ggagtgcacggggcgctcctggccctcgatgaaaactttgaccacaacagcctggcgctc
gtgttgcaaatccccacacagaacacgcaggctcgacaagtgctggagagggagttcaac
aacctgctcgccttgggcacagatcggaggctggatgacagtgacgacaagaccttccgt
cgaaccccgtcctggcgaaagcgcttccgcccccgcgatgtccacagcatcaacatgctc
agcggctcagccgagacgctgcctgctggcttccgtgtcaccagcctggtgcccctgccc
cctccgtccgcccctccctctgccaagaaaatgcccccagaagttggtgcctccgggtcg
ccaaggctggagacctccacggtccggacgtactcctgctga
DBGET
integrated database retrieval system
