Cuculus canorus (common cuckoo): 104059045
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Entry
104059045 CDS
T08597
Symbol
DCAF1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cuca01001
]
104059045 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104059045 (DCAF1)
Enzymes [BR:
cuca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104059045 (DCAF1)
Protein kinases [BR:
cuca01001
]
Serine/threonine kinases: Other
Other
104059045 (DCAF1)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104059045 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
LisH
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
104059045
NCBI-ProteinID:
XP_053932430
LinkDB
All DBs
Position
11:1366648..1409785
Genome browser
AA seq
1505 aa
AA seq
DB search
MTSGSGHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQENKRPSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVSGEMEISFHL
DSSHKTSSRVNSAAKLDDGGLRKSKSGKQHERDGFRKAKQKLGFSASEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
TFPEKELLLLIRNHLISKGLGETASVLTKEADLPMTAASHSSAFTPVAAAASPVTLPRTP
RIANGISARLSSHTSVGSTTTSVHAQARPSASQGPLALPGPSYASNSALIGRISFVRERP
SPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDAMNMDTVC
RLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDII
LSLNE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctgggcatgtggactccaaggctgagctcaccactttgcttgagcaa
tgggagaaagaacacggcagcgggcaagacatggttcctattctcaccagaatgtccgag
ctgattgagaaggagactgaagaataccgcaaaggcgatcccgacccatttgatgatcga
cacccaggccgagcggacccagagtgcatgcttggtcacttactgaggatcctttttaag
aatgatgatttcatgaatgcgttagtgaacgcttatgtgatgacaagcagagagcctccg
ctaaacactgctgcctgccgacttcttctggatatcatgccgggactggaaacagctgtt
gtctttcaggaaaaggaaggcatagttgaaaatctcttcaagtgggcacgtgaggctgat
cagccgctaaggacgtatgcaacagggctgttaggaggagctatggaaaaccaagacatt
gctgcaaattacagggatgagaactcacaattggtggctttggtgcttcgacggctacga
gagttacaggttactgaaatgactacaaaacaagaaaacaagcgtcccagtcctcggaag
gtgccgtcagatcctctgttgcctctagatgaagaggctgtggacatggattatggggag
atggcagtagatggagagcaagaggaagtttctggggagatggagatctcctttcatctg
gactcaagtcacaagaccagtagcagagtaaactctgcggcaaagctagatgatggggga
ctaagaaaaagcaaatcggggaaacagcatgaaagagatggcttccggaaggccaagcaa
aagctgggcttctctgcctcggaaccagagcggatgtttgtcgaactgtccaacagcagc
tggtcagaaatgtccccgtgggtgattggcactaattatacactttaccctttgactcca
gccatagagcaaaggctcattcttcagtacctgactccccttggggagtaccaagagcta
ctccccatctttatgcagctgggatcgagggagctgatgatgtactacatcgatttgaag
cgaaccaatgatgtgctgctcactttcgaagcccttaagcatttggcatcattgctgctg
cacaacaagtttgcaacggagtttgttgctcatggaggagtgcaaaaattgctggagatt
cctcgtccttccatggcagcaacaggggtctccatgtgcttgtattatttgtcttacaat
caagatgccatggagagggtgtgcatgcacccccacaatgtgctttcagatgtagtgaac
tacaccttatggctaatggagtgctcccacgcctcaggctgctgccatgctaccatgttc
ttctccatctgcttctccttccgtgctgtcctggagctttttgacaggcatgatggcctt
cgacgtctggttaacctgataagcacacttgagatcttaaacctggaagaccaaggagcc
ctcttgagtgacgatgagatctttgctagtcgccagactgggaagcacacctgcatggcc
ttgcgccgatactttgaggctcaccttgccatcaaactagagcaggtgaagcagtcgctt
cagcgcaccgaagggggcattttggtccatccacagcccccctacaaggcctgctcgtac
actcatgagcagattgtggagatgatggagtttctgattgagtatggtccagcacagctc
tactgggagccagcagaggtttttctcaagctgtcttgtgtccaactcatgcttcagctc
atttcaatagcttgcaactggaagacgtactacgcaaggaacgacacagtacggtatgct
ttggatgtactagccatcctgactgtggttcccaaaatccagttgcagctggcagaacct
gtggatgtgttagatgaagctgggtctactgtttccactgtgggcattagtatcatcctt
ggagttgctgagggtgaatttttcatccatgatgccgagattcagaagtcagcccttcag
atcatcataaattgtgtatgtggcccagacaatcggatctccagtattggcaagttcatc
tctggaactcctcggcgaaaacttcctcaggcccccaagagcagtgagcacacattagct
aagatgtggaatgtggtgcagtccaacaatggtatcaaagtgctgctgtcattgctgtct
ataaagatgccgatcacagatgcagatcagatccgagcgttagcctgcaaggccttggtg
gggctctcacgcagcagtactgtccggcagattatcagcaagctccctctcttcagcagc
tgtcaaattcagcagctgatgaaagagccggtgcttcaggacaagcgcagcgagcatgtg
aagttctgcaagtatgctgctgagctgatagagcgagtctcggggaagccgctgctaatc
ggcacagatgtctctcttgctcggttgcagaaagcggatgtggtggcccagtcaaggatt
acgtttcctgagaaggagctgctgctcctgattcggaaccatctcatctcgaagggccta
ggagaaactgcttctgtccttactaaagaggctgacctacccatgactgcagcatctcac
tcgtctgccttcacccctgttgcggctgctgcctctcccgtgaccctgcctcgcactcct
cgcatagctaatggcatctcagcccgtttgagtagccacacttccgtaggttccaccacc
acctctgtccatgctcaggcaaggccgtcggcatcccaaggtccacttgcccttccaggc
ccttcttatgccagcaactctgctctgattggcaggattagctttgtcagggagaggccg
tctccctgcaacggcagaaaaatcagagtgttgcgacaaaaatcggaccatggcgcctac
agccagagcccagctatcaaaaagcagctggatagacaccttccttccccacccacgctg
gacagtataatcacagagtaccttagggagcagcatgcccgctgcaagaaccctgttgcc
acctgtccccctttctctctctttactccccaccagtgtcctgagccaaaacagaggcgc
caagcgccaactaactttacctcacggctgacccgcagggcagcttttccgaagtacgga
ggggtggatggtggctgctttgatagacaccttatatttagcaggttccgtccaatttct
gtgttcagggaagcaaatgaggatgagagtggctttacctgttgtgcattttctgcaagg
gaacgattcttaatgctgggtacttgcacagggcagttgaaactctataatgtattcagt
ggacaggaagaggccagttacaactgccataactctgccatcacgcaccttgagccatcc
agggatggatcattattgctgacatccgctacgtggagccaacctctgtctgcgttgtgg
gggatgaagtctgtctttgatatgaagcattccttccctgatgaccactatgtggagttc
agcaagcactctcaggacagggtcattggcacaaaaggagacatcgcccatatctatgat
attcagactggcaacaagctattgactctgtttaacccagatcttgccaacaactacaag
aagaactgtgccacctttaaccccactgatgaccttgtcctaaatgatggtgtcctctgg
gatgtcagatcggcacaggccatccacaagtttgacaaattcaacatgaccatcagtggt
gttttccatcccaatgggctggaggtcatagtcaacacagaaatttgggacctccggact
ttccatttgttgcatacagtacccgcactggatcagtgtcgtgtggtcttcaattatacc
ggcacagttatgtacggagctatgttgcaggcagatgatgaagatgaccttctagaggag
agaatgagaagcccctttggctcttctttcaggacatttaatgcaacggattacaaacct
atagccaccatagatgtaaagcggaatatctttgatctgtgcacggacagcaaagactgc
tacctggctgtcattgagaatcaagggagcatggatgccatgaacatggatacagtttgc
agactgtatgaagtgggcaggcagcgtttggcagaagatgaagaggatgaagaagaagat
caggaggaggaagagcaggaagaggaagatgatgatgaagatgacgatgataccgatgac
cttgatgaactagatacagaccagctgctggaggctgagctggaagaggatgagaacaat
gaaaatgctggtgaggacggagaaaatgacttctctccatccgatgatgaggagcttgcc
aacctcctggaagagggagatgagggtgaagatgaagattctgatgctgatgaggaagtc
gagctgattcttggagacacggacagctcagataactccgacttggaggacgatatcatc
ctgtctctgaacgagtga
DBGET
integrated database retrieval system
