Cuculus canorus (common cuckoo): 104059072
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Entry
104059072 CDS
T08597
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104059072 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104059072 (NDC1)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104059072 (NDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
YmgF
Motif
Other DBs
NCBI-GeneID:
104059072
NCBI-ProteinID:
XP_053929115
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All DBs
Position
8
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AA seq
671 aa
AA seq
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MQVGAGWQPRLLRQVLGWRVVAAVAWSVLLLPVCTAAFIVLSGLDPFHPVRWISNSFNDF
YTSYVIFCIFFMSVVILVISIFNVEFYAVVPSIPCSRLELIGKIIHPRQAIHSVVHAVMG
MLVAWCAAVMTKGKFQFLAVPCTPSESPGDAVPQKCLNEYHLFFLLSGAFMGYSYSLFYL
MNNMNYLPFPIIQQYKYLRFRRSLPLLIKHSCVESLYFVRNFCVIYYFFGYIPKVWICTT
MDLHVDSKLYPLDTLTGLLDLSLFYHAWLCGVFLLITWYIAWLLFKIYATETHHFPVQPT
FAEETDQCLPKILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAIS
RECLSLLSDLTQRLVAQQEAAAANGRAKQPAGELKVSPQTPGAVAAEDVPLQSQRSNIVP
RASMSSLVKSSLMPLKTSPGSEVGSPFSSPALNCKMRIQDVNSPWQGSVPSPEARRRGPK
LWTSGSDLQMNGSHHESFPVLSARVGSKAVQPSFIYTWLRNKQEQIKNFLSKRVLIMYFF
SKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILDALLTLQEVVD
RYFKLPHVSSKPSRISGSLVDTSYKTLRFALRASLKTALYRITTVFGEHLNAVQVSAEHK
KRLQQFLEYKE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgggggccggctggcagccgcgcctcctccggcaggtgctgggctggagggtg
gtggccgccgtcgcctggtctgtgctgctgctgcccgtctgcactgcggccttcatcgtc
ctcagcggcctcgaccccttccacccggtgcgctggatctccaattctttcaatgatttc
tatacttcctatgtcatcttttgtatcttcttcatgtctgtggtgatactggtaataagc
atcttcaatgttgaattttatgcagttgtgccatcaataccgtgctctcgattagaactc
ataggaaaaattattcaccctcgccaagctatccattcggttgttcatgctgtaatggga
atgttggttgcttggtgcgctgcggttatgacgaaagggaagttccagtttcttgctgtg
ccctgcacaccttcagaaagtccaggtgatgctgttcctcagaagtgcctaaatgaatat
cacctcttttttctactttctggagctttcatgggatacagttatagtcttttttatctt
atgaacaatatgaattatttaccattcccaatcatacagcaatacaagtacttgcgtttc
agaagatctttacctctcctcattaaacacagttgtgtggaatcactgtattttgttagg
aacttctgtgtcatatattacttttttgggtatatcccaaaggtatggatatgcaccact
atggatcttcatgtagacagtaaattgtatcctcttgacactctgactggcttattggat
ctctccttgttttaccatgcctggttatgtggtgtatttcttctgattacctggtacatt
gcatggttgctcttcaaaatctatgctacagagacacatcattttcctgtacagccaact
tttgctgaggagacagaccagtgcctgcctaaaatcttaaacagcaaccctcccctcatt
ataaagtttttagccttacaagacttgatgttactttcccaatattctcctgttcgacga
caggaagtctttagccttagtcagccaggtgggcacccacacaactggactgcgatatca
agggagtgtttgagtcttctgagtgatctgacccagaggctggtcgcacagcaggaagct
gcagcagcaaatgggagagcaaagcagccagcaggagagctgaaagtatctccacagact
ccaggagctgttgcggcagaagatgtacctttgcagtcacagagatctaatattgttccc
agagcctccatgtcttcactggttaagtcatccttaatgcctttaaagacatcgcctggg
tctgaagttggttcacctttcagctcacctgctttaaattgcaagatgagaattcaggat
gtaaactctccttggcaaggatcagtcccaagtcctgaagctaggagaagaggaccaaag
ctgtggacatcaggttcagatctgcaaatgaacggttctcaccatgaatccttcccagtc
ctctccgcaagagttggcagcaaggcagtacagccaagctttatttacacgtggcttcgg
aacaagcaagaacagataaaaaactttttgtcaaaacgagtcctgataatgtatttcttc
agcaagcacccagaagcctccatccaagctgttttctccgatgcccaaatgcatatctgg
gctttagaaggtctatctcacttggtagcagcttcctttactgaagaccaatttggagtt
gtccaaactacactgccagctatcctggatgctttactgactcttcaggaggttgtagac
agatacttcaaactgcctcatgtttctagcaagccctccaggatttcaggaagtctggtg
gacacgtcctacaaaacactacgatttgcacttagagcatctctgaaaacagcactgtac
cggataactactgtctttggagaacacttgaatgcagtgcaagtgtctgcggagcataag
aaaagacttcagcagttcttggaatacaaagaataa
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