Cuculus canorus (common cuckoo): 104059242
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Entry
104059242 CDS
T08597
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104059242 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
104059242 (U2AF1)
Spliceosome [BR:
cuca03041
]
Complex A
U2 snRNP components
U2 related factors
104059242 (U2AF1)
Complex B
104059242 (U2AF1)
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GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
104059242
NCBI-ProteinID:
XP_053925058
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Position
1:92102173..92119968
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AA seq
235 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGRERDRRRSRDRERSGRF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctagcctccatcttcggaactgagaaggacaaagtcaactgttcattt
tatttcaaaattggagcttgtcgtcatggagacagatgttctcggttgcacaacaaacca
acatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgccgtgagcgatgttgagatgcaggaacattacgatgaa
ttctttgaggaggtcttcacagaaatggaagaaaaatatggtgaagtcgaggagatgaac
gtttgtgataaccttggagatcatctagttggaaatgtatatgtaaagtttcgccgtgaa
gaagatgcagaaaaggctgtgattgacctgaacaatcgctggtttaatgggcagcccatt
catgctgagctctcacctgtgactgacttcagagaggcctgttgccgtcaatatgaaatg
ggagagtgtacacgaggaggtttctgcaactttatgcatttgaagcccatttctcgagag
ttaagacgcgagttgtatgggcgtcgtcgtaaaaagcatagatccaggtcaaggtcccgt
gaacgtcggtctagatccagagatcgtggtcgtggaggtggtggtggaggaggacgcgaa
cgtgacaggaggcggtcaagagatcgtgaaagatctggtcgattctga
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