Cuculus canorus (common cuckoo): 104059294
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Entry
104059294 CDS
T08597
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cuca04515
]
104059294 (PCDH19)
Cell adhesion molecules [BR:
cuca04515
]
Cadherins
Protocadherins
104059294 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
104059294
NCBI-ProteinID:
XP_053931747
LinkDB
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Position
10:complement(6409819..6469015)
Genome browser
AA seq
1096 aa
AA seq
DB search
MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFR
VVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDL
NDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRG
DGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPA
YTVSVPENAPLGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSG
AIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENA
PPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLT
IQAKDNGVPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDL
GLNGSVSYQIMPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKSFEFKVLAKDGGNPS
LQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGR
LSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYL
SPALDAQESIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSY
GHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSE
STFLNVESQNNRNATSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHL
IKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEQ
DQNEGFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEAKAVDTEPYADCS
TKRTFATFGKEGGEPLADERLANPKGKRTVDPAACSPKVSGTVREAGNGCEAVSPVTSPL
HLKSPLSGKPVAPYGTGHCTGNREREPFGNSGPSRPTEAEPRGADSESGGQEGNPLLQER
REKDSPGARRLKDIVL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgggggctctcccggcgctgctcggggccgccttgctgtgggccggcgccggggctctc
gtgaacctcaagtactcggtggaggaggagcagcgggcgggcacggtgatcgccaacgtc
gccaaggacgcccgggacgccgggttcgtgctggacccccggcagcccgccgccttcagg
gtggtctccaactcggccccccacctggtggacatcagccccgggtcggggctgctggtg
accaagcagaagatcgaccgggacttgctgtgccggcagagccccaagtgtgtcatctcg
ctggaggtgatgtccagctccatggagatctgcgtgatcaagctggagatcaaggacctc
aacgacaacgcgcccagcttccccaccgaccagatcgagctggagatctcggagacggcc
agccccggcacgcgggtaccgctggagagtgcctacgacccggactcaggcagctttggc
gtgcagagctatgagatcacccccaacgacctctttgggctggagaccaagacgcggggc
gatgggtcccgctttgctgagctggtggtggagaagagcctggaccgtgagactcagtct
cactacagctatgtgatcacggcgctggatggtggcgacccacccaacttcggcacggtg
gagctcagcatacgcgtcatcgactccaatgacaacaacccgctcttcgaggagccagcc
tacaccgtcagtgtgcctgaaaacgccccactgggtacgccggtcatccgcctcaatgcc
tctgacccggacgaaggcaccaacggccaggtcctctattccttccacagttatgtctcc
gagcgggcccgggagctattccagatcgacccccagagtggccttatcaccgtgagcggt
gccattgactatgaggagggtcacgtctacgagctggacgtgcaggccaaggacttgggg
cctaactccatccctgcccattgcaaagtgaccatcagcgtccaggatgccaatgacaac
ccgccccttatcaacctgctctctgtcaacagcgagctggtggaggtgagcgagaacgcc
cctccagggtacgtcatcgccctggtgagggtctcggaccgcgactctggagctaacggg
cgggtgcagtgcaagctccttggcaatgtgcctttccggcttcaggagtatgagagtttc
tccaccatcctggtggatgggaggctagaccgggagcagagggaccagtacaacctcacc
atccaggccaaggacaatggcgtcccctccctgcaggccaccaagtccttcaccgtcaag
atcaccgatgagaatgacaatcatccccacttctccaagccctattaccaggtcatcgtg
caggagaacaacaccccgggggcctacctcctctcagtctcagccagggaccccgacctg
ggcctcaatggcagtgtctcctaccagatcatgccttcccaagtcagggacatgcctgtc
ttcacctacgtctccatcaaccccaactctggagatatctatgctttgaggtctttcaat
catgaacagaccaagtcctttgagttcaaggtcttggcaaaagatgggggtaatccctct
ctgcagagcaatgccactgtcagggtgattgtcctggatgtcaatgacaacacccccgtg
atcacggccccgccgctggtcaacgggaccgcggaggtgtacatccccaggaatgcaggg
gtcggctacttggtgacggtggtcaaggcagatgactatgatgagggtgaaaatggcaga
ctttcctacgaaatggtggaaggagacagaggattttttgagatagaccaggtcaatgga
gagataaggaccaccagagcctttggggagaacgcaaagacagcctacgagctgatcgtt
gtggctcacgaccatggaaaaacatctctctcggcttctgccttgattttgatatacctg
tctccagccctggatgcccaggagtccataggaccagttaacctctccctgattttcatt
attgccctggggtctatcgcagccattctttttgtcaccatgatcttcgtggcagtcaag
tgcaaaagggataacaaggaaatcaggacctacaactgcagaatcgcagagtactcctac
gggcatcaaaagaaatcaagcaagaaaaagaaaatcagcaagaatgatatccgcctggta
ccgcgggacgtggaagagacggataaaatgaatgtcgtgagctgctcctctctcacttca
tccctcaactactttgactaccaccagcagaccctgccactgggctgccgccgctccgaa
agcaccttcctcaacgtggagagccagaacaacaggaatgccacttccaaccacatttat
catcacactttcacagggcagagtccccagcagcccgacctcatcatcaacggaatgccg
ctgccagagactgaaaactactccttcgattccaactacgtgaacagcagagctcattta
ataaaaagcagctccacgttcaaggacttggaggggaacagtctgaaggacagcggccac
gaggagagtgaccagacagacagtgagcacgacgtgcagcggggcctctactgcgacaca
gctgtcaacgatgtgctgaacaccagcgttccgtccatggggtcccaggggcctgaacaa
gatcagaatgaaggatttcattgcagggaagagtgccgcatcctgggccactcggacagg
tgctggatgccccgcggtgcagtccccagccgcgccaagtcccctgagcacgggaggaac
gtcatcgccctctccatcgaggcaaaggcggtggacacggagccttatgcagactgcagc
acaaaaaggaccttcgccaccttcggcaaggagggcggtgagcccctcgccgacgagcgg
ctcgccaaccccaaaggcaaaagaacggtggacccggccgcctgcagccccaaggtgagc
ggcaccgtccgggaggcgggaaacggctgcgaggccgtcagccccgtcacctcgcccctc
cacctgaagagccctttgtccggcaagccggtggcaccttatggcactgggcactgcacc
ggcaaccgggaacgggagccctttgggaacagtggtccttcccggccaacggaggcagag
ccccggggggcggacagcgagagtggcgggcaggagggcaacccgcttctgcaggaacgc
cgggaaaaggactcacctggcgcccggagactaaaagacatcgtcctttga
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