Cuculus canorus (common cuckoo): 104059297
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Entry
104059297 CDS
T08597
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104059297 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104059297 (CSTF2)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
104059297 (CSTF2)
U7-dependent histone pre-mRNA processing factors
104059297 (CSTF2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104059297
NCBI-ProteinID:
XP_053931898
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All DBs
Position
10:6533763..6541053
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AA seq
590 aa
AA seq
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MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNQQPVPGPGPGPGPGPGPGPNAQLNAQNTPSSQPQPI
GGLHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGGGPVPLER
GQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTL
LSVTGEVEPRGYLGPPHQGTPMHHMPGHDSRGPPHEMRGAPMGEPRPLMGEPRGPLMDAR
VGRDPRGLEPRGLEPRGLEPRVLEARALEARGLEPRVLEPRVLEARAMEARVMEPRGLEP
RGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGGGIPGAGVQGAGQPGGFSPGQ
SQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgtcggtgagggaccccgccgtggaccgctccctgcgctccgtgttcgtg
gggaatatcccatacgaggccacagaggagcagctgaaggacatcttctctgaggttggg
cctgtggtcagctttaggttggtgtatgacagggagacaggaaagccaaaaggctatggc
ttctgtgagtaccaagaccaggagacggccctcagtgccatgcggaacctgaacgggcga
gagttcagcgggagggccctgcgtgttgacaatgcggccagtgagaagaacaaggaggag
ctcaagagtttgggcacaggcgcacccatcatagagtcaccctatggggaccctgtcaat
cctgaagatgcccccgagtccatcagccgggcagtagccagcctgccgcccgagcagatg
tttgagttgatgaagcagatgaagttgtgtgtccagaacagccctcaggaagccaggaac
atgctgctccagaatccccagctggcttacgctctgctgcaggcccaggtggtcatgagg
attgttgacccggagatcgcactgaaaattctgcatcgtcagaccagtgttcctcctctg
atcccaggcaaccagcagccagtgccaggaccagggcctggaccgggaccagggcctggg
ccagggccaaacgcccagctgaatgcacagaataccccctcgtcccagccacagcccata
ggtgggctgcatgtaaacggcgcgcctcctctgatgcagccgcccatgcaggggggagtg
ccggcccctggacagatggcagcccctgtgcagggccctggccccggccccatggctcca
ggaggtgggatgcagccacaggttgggatgccaggtggaggtcctgtccccttggagcgc
ggacaagggaacctgcagctctcgcccgtgggacctgccaggcctgcgtctatcgaacgc
gttcaagtgcccatgccagacccgagggcccctatgcagcgtggacctctacctgctagt
ggcccgccaccccgaggccttttgggagatgccccgaatgaccctcgcggagggaccctg
ctctcagtcactggagaagtggagcccagaggttaccttgggccgccccaccagggaacc
cctatgcaccatatgcctggtcatgacagccgtggcccgccccatgaaatgaggggggca
cccatgggagaaccccgaccgctgatgggagagccgcgggggcccctcatggatgctcga
gttggaagagatccccgagggctggagccgcgaggattggagccacgggggctggagcct
cgggtgctggaggcacgagccctggaggcacgaggcctggagccccgggtcctggagcca
cgagtgctggaagccagagccatggaggccagggtcatggagccccggggtctggagcct
cgagggcctggtcccaacccacgtggccccatgcctggtggcatacagggtcctgggcca
cttaacatgggagccagtggcccacaggggccccgccaggttcctaacatggcaggagga
ggcattcctggggcaggagtccaaggagctggtcagcctggaggctttagccctgggcag
agccaggtcactccgcaggatcatgagaaggcagcccttatcatgcaggttctgcagctg
acagcagaccagattgctatgctgcccccagagcagcggcagagcatccttattctaaag
gaacaaatccagaagtcgacaggggcaccgtga
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