Cuculus canorus (common cuckoo): 104059315
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Entry
104059315 CDS
T08597
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04517
IgSF CAM signaling
cuca04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104059315 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104059315 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cuca04812
]
104059315 (SPTBN1)
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104059315 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
104059315 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
SCAR_helical
SOS1_NGEF_PH
CAMSAP_CH
PH_11
Motif
Other DBs
NCBI-GeneID:
104059315
NCBI-ProteinID:
XP_009559263
LinkDB
All DBs
Position
3
Genome browser
AA seq
2276 aa
AA seq
DB search
MLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLT
LGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGM
AFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSI
ITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILN
NRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPREG
KLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAMRETWLSENQRLVS
QDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVVAVAKELETENYHDIKRITARKDNV
IRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYIMDWMDEMKVLLLSQDYGKHLLGVEDL
LQKHALVEADIAIQAERVRGVNASAQKFATDGEGYKPCDPQVIRDRVAHMEFCYQELCQL
AAERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSDDYGKDLTSVVRLMSKHKAFEDE
MSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIKDIREQWANLEQLSAIRKKRLEEASLL
HQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQSLVKKHKDVAEEIASYRPIIDSLHEQ
AKALPQEHAGSPDVQGRLSGIEERYKEVAELTRLRKQALQDTLALYKMFSEADACELWID
EKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLMHSGHPSEKEI
KAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYHLECNETKSWIREKTKVIESTQDLGN
DLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEKLESEHPDQAQAILSRLAEINDVWEE
MKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLTEAEKLLTQHEN
IKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLS
QSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKIN
AVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNREAASELLMRLKDNRDLQKFLQDCQE
LSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELASNKEWLEKIEKEGMQLIAEKPE
TEAVVKEKLTGLHQMWEELESTTQTKAQRLFDANKAELFTQSCADLDKWLNGLESQIQSD
DYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQSQARALSQEGKSTDEVDGKRLTVEKK
FLELLEPLNERKANLLASKEIHQFNRDVEDEILWVGERMAIATSTDHGHNLQTVQLLIKK
NQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEAIQQRLADLQQLWNLLIEETEKRHKR
LEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAVSMLKKHQILEQAVEDYAET
VHQLSKTSRTLVADNHPESERISMRQSKVDKLYAGLKDLAEERRGKLDERHRLFQLNREV
DDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHMADELIN
SGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILGRIQDKHKK
LPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKREN
EVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDVSSVE
LLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWE
DRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSREIGQSVDEVEKLIKRHEAFEKSAA
TWDERFAALERLTTLELLEVRRQQEEEERKRQPPTPEPSPKVAEDADTQQQWDGTKGEQV
SQNGLPSDQESPRVAESAETNEMVNGAAEQRTSSKESSPVPSPTADRKAKTAIQAQTAAT
LPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWHNVYCVINNQEMGFYKDSKAAASGI
PYHNEIPVSLKDAVCEIAVDYKKKKHVFKLRLTDGNEYLFQAKDDEEMNTWIQAITSAIS
SDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGKREKDKEKDKEKRFSLFGKKK
NT seq
6831 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcaaacttctggaagttctttcaggagagagacttcctaaaccaacgaaggga
aggatgcgcatccattgcctggagaacgttgataaagcgcttcagttcctgaaagagcaa
agagtgcacctagaaaacatgggatctcatgatattgtggatgggaatcacaggctgaca
cttggccttatttggactattatcctgagattccagatccaagatatcagtgttgaaact
gaggacaacaaggagaagaaatctgctaaagatgctttgcttttgtggtgccagatgaag
acagctggttaccccaatgtcaacattcacaactttactacaagctggagggacgggatg
gctttcaatgccctaatacataagcacaggcctgatctgattgattttgacaagctgaag
aaatcaaatgcacactacaatctgcagaatgcttttaaccttgcagagcaacaccttggt
ctaactaagctcctggaccctgaggatatcagcgttgatcatcctgatgaaaagtccatc
atcacctatgtggtgacgtattaccactacttctccaagatgaaagctttagctgttgaa
ggaaaacgtatcggaaaggtgcttgacaatgccattgaaacagagaaaatgattgaaaaa
tatgaatcgctggcttctgacctgcttgagtggattgagcaaaccattatcatcctcaac
aatcgcaaatttgccaactctctagttggtgtgcaacagcagctacaggcattcaacact
taccgcacagtagagaaaccacccaaatttacagaaaaaggaaacctggaagtgctgctt
tttaccatccaaagcaaaatgagagccaacaatcagaaagtatacatgccaagggagggc
aaactcatctctgatattaacaaggcctgggaaagactggaaaaagctgaacatgaaaga
gaactggcactgcgaaatgagctcatcagacaagagaaactggaacaacttgcacgcaga
tttgatcgcaaggcagctatgagagaaacttggctgagtgaaaatcagcgtctcgtttct
caggataattttggctttgaccttccagcagtagaggctgcaacaaaaaaacacgaggcc
attgaaacagacattgcagcctatgaagaacgagtccaggctgtggttgcagttgcaaag
gagcttgagactgagaattaccatgatatcaaacgcattactgcgagaaaagacaacgtt
atccgcctatgggagtatctcctggagctgcttagggcacggagacagcggctggagatg
aatcttggtctgcaaaagattttccaggaaatgctgtacattatggactggatggatgag
atgaaggtgcttttgctgtctcaagactacggcaaacatttgttaggagttgaagaccta
ttgcagaaacatgctcttgtggaagctgacattgctattcaggctgagagagtgagaggg
gtcaatgcatctgctcagaagtttgccactgatggagaaggttacaaaccatgtgaccca
caggttatcagggaccgtgttgctcacatggagttctgttaccaagagttgtgccagctt
gcagctgagcgccgggcccgcttggaggagtcccggcgcctctggaagttcttctgggaa
atggctgaagaagagggttggatcagggagaaggaacagatcctgtcatctgatgactat
gggaaggacttaaccagtgttgtacgtctcatgagtaaacataaggcatttgaagatgaa
atgagtggtcgtagtggccactttcagcaggcgataaaagaaggtgaagacatgattgcg
gaggagcattttgggtctgagaaaatcagagaaagaattaaggatattagggagcagtgg
gctaacttggaacagttatctgccattaggaagaagcgtctggaggaagcctctctcctt
caccagttccaggctgatgctgatgatattgatgcatggatgttggacatcctcaaaatt
gtctccagcaatgatgttggccatgatgaatattccactcagtctttggtcaagaaacac
aaagatgtggctgaagagattgcaagctaccggccaatcattgactcgcttcatgaacaa
gcaaaggctctaccgcaggaacatgctggatctccagatgtgcaaggcaggttgtccgga
atagaggaaagatacaaagaggttgctgagctgactcggctgcgtaaacaggccttgcag
gatacccttgctctttataaaatgttcagtgaggcagatgcttgtgagctttggattgat
gaaaaggagaagtggctgaataatatgcagattccagagaaactggaggacctggaagtg
atccagcacagatttgaaagcttagaaccagaaatgaacaatcaggcatcacgtgttgcg
gtagtgaaccaaattgctagacagctaatgcacagtggccatccaagtgagaaggagatc
aaagcgcagcaagataaactcaacacaagatggagccagttcagagaactggtagatagg
aagaaggatgctctgctctctgctctgagtatccagaactaccatcttgaatgtaacgaa
accaaatcctggattagagaaaagaccaaagtgatcgaatccacacaagatctgggtaat
gatctggctggagtgatggccctgcagaggaagctgacaggcatggaacgtgacctggta
gccattgaagccaagctaagtgacctgcaaaaagaggcagaaaagttggaatctgagcat
cctgaccaggcacaggctatcctttcacggctcgcagaaatcaatgatgtatgggaagaa
atgaagaccaccctcaagaaccgggaagagtcccttggagaggcaagcaaactgcagcag
ttcctgagagatctggatgacttccagtcttggctatccagaacgcagactgcaattgca
tcggaagatatgccaaacacactgacagaggctgagaagctgctcactcaacatgagaat
attaagaatgaaatcgacaattatgaggaagattatcagaaaatgagagacatgggtgag
atggtgacacagggacagactgacgctcagtacatgttcttacgccagcgcctacaagct
ttggacactggatggaatgagctccacaaaatgtgggagaacaggcaaaatctcctttcc
cagtctcatgcctaccagttgtttctcagagataccaagcaagcagaagcatttcttaat
aaccaggagtatgttttggcacacacagaaatgcccactaccttggaaggagcagaagct
gctattaaaaaacaggaggatttcatgaccacgatggatgccaatgaagaaaagatcaat
gcagtcgtagagactggcaggaggctagttagtgatgggaatattaactctgataaaatc
caggagaaagtggactctattgatgacagacataggaagaaccgtgaagcggccagtgaa
cttctgatgagactgaaagataacagagatcttcaaaagtttcttcaggattgtcaagag
ctctcactctggatcaatgagaagatgcttacagcccaggatatgtcctatgatgaggca
aggaacctgcatagcaaatggctgaaacatcaggcatttatggcagaacttgcatccaac
aaagaatggctggagaagattgaaaaggagggaatgcagctcattgcagagaaaccagag
actgaagctgtagtgaaagaaaagctgacaggtctccatcaaatgtgggaagagcttgaa
tccactacccagaccaaggctcagcgtctctttgatgcgaacaaggcggagctttttacc
cagagctgtgctgatttggataagtggctgaatggtttggagagccaaattcagtcggac
gactacggaaaagatctcaccagtgtaaacatcttgttgaagaagcagcagatgctggag
aatcaaatggatgttcgtaagaaggagatagaggagctgcaaagccaggcacgggcttta
agccaagaagggaagagtacggatgaagtagatggcaagcgccttactgtagagaagaaa
tttttggagttgttggaacctttgaatgaaagaaaggcaaacctgctggcttccaaagaa
atccaccagttcaaccgggatgtggaagatgaaattttgtgggtcggagagaggatggct
atagctacgtctactgatcatggacacaatctacagactgtgcagctactaataaagaaa
aatcagacccttcagaaggaaatccagggacatcagcctcgtattgatgacatttttgag
aggagtcaaaacattattactgagagtagccccaatgctgaagcaattcagcagagactt
gcagacctgcagcaactgtggaacctcctaatcgaggagacagagaaacgccacaagcgc
cttgaggagtctcacagagcacagcagtactactttgatgctgctgaggctgaggcctgg
atgagcgagcaggagctctacatgatgtcagaagagaaagccaaagatgaacagagtgca
gtgtccatgctgaagaaacaccagattttggaacaagctgtcgaagactatgctgaaact
gtgcaccagctttcaaagaccagcagaactttggtggcagataaccacccagaaagtgag
cgtatcagtatgcgccagtccaaagtggataagctgtatgcaggcctgaaggatctagct
gaagagagacggggcaagctggatgagagacacaggctgttccaacttaaccgtgaggtg
gatgacctggagcaatggattgctgaaagggaggtggtggcaggatcccacgagctggga
caggactacgaacatgtaacaatgctacaggagcgattccgagaattcgcccgagacact
gggaacattggacaggagcgtgttgatactgttaaccacatggcagacgagcttatcaac
tctggacattcagatgctgcaacaattgcagagtggaaggatggactcaatgaggcctgg
gctgatctactggagctcattgacacgagaacacaaattctagcagcctcttatgaactg
cacaaattttaccatgatgccaaggagatcttgggacgtattcaagacaagcataagaaa
ctgcctgaagagcttggtagagaccaaaacacagtggaaacactacagagaatgcacaca
acatttgagcatgatatccaggctctcggcacacaggtgagacagctgcaggaggatgct
gcacgccttcaggctgcctatgctggagacaaagctgatgacatccagaagagggaaaat
gaggtcctagaagcctggaaggcgctgttggatgcctgtgagggccgcagggttaggttg
gtggatacaggagacaagttccggttcttcagcatggttcgtgatctcatgctttggatg
gaagacgttatccgacagatagaggcccaggaaaagccaagggatgtttcgtctgttgag
ctgctaatgaacaatcaccagggtatcaaagcagaaatcgatgcccgaaacgacagcttt
actacctgcattgagctcggcaaatctcttctggcaagaaaacactatgcatcagaagag
atcaaggaaaaacttctgcagctgacagagaagaggaaagaaatgattgacaaatgggaa
gacagatgggagtggctgagactgattttggaggtacaccagttttcaagagatgcaagt
gtggctgaggcctggctgctgggacaggagccctacctatccagccgtgaaataggtcag
agcgttgatgaagtggaaaaattaattaagcgacatgaagcatttgaaaaatctgcagct
acttgggatgagagatttgcagcactggaaagactgactacgttggaactgttggaagta
cgtcgacaacaagaggaagaggagaggaagagacagccgcccactccggagccaagtccg
aaggttgcggaggatgcagacacccagcagcaatgggacggaacaaaaggagaacaggtt
tcccagaatggtttgccatcagaccaggaatctccacgggtggcagaatctgcagaaaca
aatgaaatggtcaatggagctgcagaacagaggacaagttccaaagagtccagtcctgtt
ccttctccgacagcagaccgcaaagccaagaccgccattcaggcccagactgctgctacc
ctaccagccaaaacacaggagattccttcagctcagatggaaggcttcttacaccgcaaa
catgaatgggagacacacagcaagaaagcctcaagcagatcatggcataacgtgtactgt
gtcataaacaaccaagagatgggcttctacaaggattcaaaagctgctgcttctggcatc
ccctaccacaatgagattcctgtcagcttgaaagatgcagtctgtgaaatagcggtcgat
tataaaaagaagaagcatgtgttcaagctaagattgactgatggcaacgaatacctcttc
caagccaaagacgatgaggagatgaacacgtggattcaggccatcacatcagctatctct
tctgacaaaattgaagtgtccccaaccacccagagcactccagcctccagccgtgcccag
accctgcccgccagcgtcacgataaccagcgagtccagccctggcaagcgggagaaagac
aaagagaaagacaaagagaaaagattcagcctttttggtaaaaagaagtga
DBGET
integrated database retrieval system
