Cuculus canorus (common cuckoo): 104059346
Help
Entry
104059346 CDS
T08597
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
104059346 (RBM39)
Spliceosome [BR:
cuca03041
]
Common components
Common spliceosomal components
General mRNP proteins
104059346 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
104059346
NCBI-ProteinID:
XP_053937139
LinkDB
All DBs
Position
16:1536827..1568770
Genome browser
AA seq
522 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDRSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaattgagcagtgccaatggccacgaagaacgcagcaagaagagaaaaaagagcaagagc
cgaagtcgaagccatgacaggaagaggagcagaagtaaggaacgcaaacggagccgagat
cgggaaaggaagaagagcagaagccgggaaaggaaacggagcagaagcaaagaacgcaga
cgcagccgttctagaagtagagaccgcagattcagaggccgctatagaagtccctattcc
ggtccgaaattcaacagtgccatcagagggaagattggtctgcctcacagcatcaaatta
agcagacgacgctccagaagcaaaagtcctttcagaaaagacaggagccctgtcagagaa
cctattgataatctcaccccagaagagagggatgctcgaacagtattctgcatgcagctg
gctgcgagaattcgaccgagagacctggaagaatttttctctacagtagggaaggttcgt
gacgtacgaatgatttcagataggaattccaggcgttcaaagggaattgcgtatgtagaa
tttgtggatgtgagctcagtgcctctggcaataggactaaccggacagagagtcctgggt
gtgcccatcatagtacaggcatcgcaggcagagaaaaacagagcagcagcaatggcaaat
aacctgcagaagggcagtgctggtccgatgaggctctatgtggggtccttacatttcaac
atcactgaagatatgctgcgaggaatttttgagccatttggcaggattgaaagcattcag
ctgatgatggacagtgaaaccggacgctcaaaaggatatggatttattacgttctcagac
tccgaatgtgccaaaaaggccttggaacaactcaatggattcgagctggctggtaggcca
atgaaagtgggacacgtaactgagcgcactgatgcttccagtgctagttcgtttttggac
agtgatgagttggaacggactggaattgacttgggaacaactggtcgccttcagttgatg
gcaagacttgcagaaggcactgggctgcagattcccccggccgcacagcaggctctgcag
atgagtgggtctttggcgtttggagctgtggcagatctgcagacaagactgtcccagcag
aatgaagttctggccgcagctgcttctgtacaaccacttgcaacacagtgcttccagctt
tccaacatgtttaatcctcaaactgaagaagaagctggctgggacacagaaattaaagat
gatgtcattgaggaatgtaacaaacacggaggagtcatccacatctatgtcgacaagaac
tccgctcagggcaatgtgtacgtcaaatgcccctcgatcgctgcggccatcgcagctgtc
aacgcgctgcatgggaggtggtttgcaggtaaaatgatcactgcggcatacgtccctctt
ccaacgtaccacagccttttcccagactcgatgaccgcaacccagctactggttcccgtt
cgacgatga
DBGET
integrated database retrieval system
