Cuculus canorus (common cuckoo): 104059400
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Entry
104059400 CDS
T08597
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104059400
04091 Lectins [BR:
cuca04091
]
104059400
Ion channels [BR:
cuca04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104059400
Lectins [BR:
cuca04091
]
C-Type lectins
Others
104059400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
Lectin_C
SUEL_Lectin
Ion_trans
GPS
AGA2
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
104059400
NCBI-ProteinID:
XP_053935045
LinkDB
All DBs
Position
13:8921123..8967864
Genome browser
AA seq
2615 aa
AA seq
DB search
MKTSLEHSTRLAMPCGLARLGMTFGLWSIETEFPKAEKLEPDSKSIKATDKTYTNFNGSG
ADSRRTACGSPSSSIFSKAICPTLYCCCCHKQQRGRRNADDMTRTTSQAFEKGSKKSGNV
ISKISATQGTEQKMRLGIALQVSFAVCLAVEEVTIDEETPCSKYQLAFNHSCYEFVRLQH
TFTSAQSWCERGGGHLVFIENEETQEFLQKHLAEDQEWWIGMISNSLLDETTDGSMIWLD
TSNISYNNWYKDQPSSFSSTCGYILKNAKYQWGVTENCSQEFDFICEFESGQSIACDNYN
ATVQCGSGQVIQIGESFYGRKNPHYCVSETHLQHDTDENCSWISVKDEIAGQCHGLQVCQ
VAADGTFFGDPCPALGSYLSIHYHCKEGLQLVVTETCYVFENITVSLNWLLSPYSGNLSC
IISTGDGHTIDPYYPLTLVSNVTYKYSYPGEFTVFVECSTSEWHVMAQKRVTVQDKMDQL
SITGCYSQYESGNSSCCRTLYGDVLWIQVELNGGNEVTYILLADNMTLTESSAKEGIVPH
NLTLDSASQELLGPGIHQLEIRAFSNTTASEISESIAVHLIEPISGLQATLGSHTLQLRE
NLEINVSVSHGAPDKLIFEVTGSNETHSYKEDGSHVEPRTYTIPMQSEGTFLVKVVAMNA
FSNMSLDLGFITVLANNSHEKDSAKEEGGSTTNIQKTNDHKRKSKIYIKPSRHVDPFTTV
VLGWPDYNNNSSFLWSCGACWPKWNECVQQQTILTNQSEVQIPPSCLPPPKSAVTVRVTV
RNHSNEERQDEQCLYVTAKQDLQLEIRCEANCKPVDANDEVVLSVSRQDSQGIHYNWYLD
NTFQSKSTPLPLACGLTGFQQNSLTLLQSNTSLLKMNSSFLQTQGEAFQIKVTAMTQRGY
GEETYLVSTVPPPEIPSCSVSPTQGSVLTAFTVSCSTPCLADSCQSSHNRQLTYCFYLKS
NSLLHCGPDPELFQVYLPLGEQENNFTLYLTITVSNNFGDTVQTHASVKVGQADMIDGNL
TLQAFVSKKTNTILKDGNHSMSLFQLYKSVTSVLNQDTQGGSSNMSLPMDTRKELRGLML
TTLSAVNVTSMQTALKMSEVLKEITYRSEELSVSAQVEASNTLKEVSASLLSVNTEDSRD
DQQLRDAANYLFNAVSNVLKASVQIRTANNSVPEAEQSSAAHQLLNTIENLQSALLFGKE
PDDEPTVLTTPSALLYIHRLQTENIDGTSINICSSSSASFSLPPASSLSVLGVDDETVDI
RMVSFAMNPFFSSDTSFDISGTVGGLSLTGPDGSIIPVSNLKENIEIILPRLSAAQEDRI
LLNLGNFSTFQFNVTSENTSIVIHLESERDIPLILYLGYGYRPNETNYDMKNHLFYNKTT
RGETNAWVLSPEELIFGEGTYYFMVLQDMEMDSTVYERVTIAVTCFASRCVFWDEHQGNW
NSYGCHVGPKTNPRSTHCLCNHLTFFGSSFFVLPNAIDVSKTAELFGTFVNNPVVVTTVG
CIFLIYVLAVIWARRKDIQDDAKVKITVLEDNDPFAQYRYLVTVFTGHRRGAATTSKVTL
TLYGLEGESEPHHLADPNTPVFERGGVDVFLLCTFFPLGELQSIRLWHDNSGDSPSWYVN
RVLVHDLAWDQKWYFLCNSWLSVDIGECVLDKVFPVATEQDMKQFSNLFFMKTSKGFQDG
HIWYSVFSRSPRSSFTRAQRVSCCFSLLLCTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQ
EVMIGFESSFLMFPINLLIVQIFRNVRPRPAMKGREKKPRKNGRVSPSPPPTPQVTQAVS
LTPEAVIKDIRRIANSLFKALRTPAVTSVSALGKSTNINTLLALVEDIICQQNRAGQEFY
DESKKKDDPIIVTLGTSAMQEKPKSSTPEKGMCEQLKYSDYNRCLYMQLQHVQMELELLG
PQKFQTPQSYTQAVQQVQHMKNLLESHICSSASISERCSLIPSFSGDSKKSYSSKGLPWW
FVFIAWFLVVATSGVSGFFTMLYGLHYGKENSIKWLISMAISFLESLFVTQPLKVLGFAA
FFALVLKKVEHEDEENTAINGPLSTPGDSNPLFGARRDSGSNIYRPPPKADVEKMKISCM
KEQKAFALLREILAYLGFLWMLLLVAYGQRDPNSYYLNKHIENSFTDGFHDICSYQDFFK
WANTTLVKNLYGSYKGFITDGNSKLVGSARIRQVRVKGDTCPISPELQHVIQECHAPYSQ
QTEDTSVYAERWNTSVFDNSSDFSSAWQYQSQSKLRGQPIWGKLAIYRGGGYVVHLGTDP
DNTSRILQYLFNKVWLDTFTRAVFVEFTVYNANVNLFCIVSLMFETNALGAFFTSAELQS
VRLYPYTNSLHIFVVAAEVIYFLFIVYYMIVQGKLIKTLRWRYFHSKWNLLEMAIILISW
SALSVFVKRTILGTRDISYYQEHKEDCVSFNETARADAILGYLIAFLVLLSTVKLWHLLR
LNPKLNMITSTLRRAWGDISGFITVIAIMFLAYSIATNLIFGWKLYSYKTLFDAAETMVS
LQLGIFNYEEVLDYNPVLGSFLIGSCIIFMTFVVLNLFISVILVAFGDEQKHYQASEEEE
IVDLMLMKLCSFFGIKCKKEEQPVTNDKLEQPAGD
NT seq
7848 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatctttggagcacagcactcgtctggccatgccctgtggcctcgcaagactg
gggatgacatttgggctgtggtcaatagaaacagaatttcccaaggcagagaagctggag
cctgattcaaaatccatcaaagccacagacaagacttacactaatttcaatggctctgga
gcagattcccggaggacagcctgtggctcccccagctccagcatttttagcaaagcaatc
tgtcccacactctattgctgctgctgtcacaagcagcaaagaggaaggagaaacgctgat
gacatgaccaggacgacatctcaggcttttgaaaaaggcagcaaaaagagtggtaatgtg
ataagcaagattagtgccacacagggcactgagcagaaaatgcggcttgggattgcactt
caggtttctttcgctgtatgtttggctgtggaagaggtaaccattgacgaagaaactcct
tgctcaaagtaccagctggctttcaaccattcatgctatgagtttgttagactccagcat
accttcacaagtgcccagagctggtgtgagagaggaggtggtcatcttgtctttattgaa
aatgaggaaactcaagagttcttgcaaaaacatcttgctgaggatcaggaatggtggatt
ggaatgatctcaaactccttgctggatgaaactactgatgggtcaatgatttggctggac
acttccaacataagctacaataactggtacaaggatcagccatcctccttctcatccaca
tgtgggtacatcctgaagaatgccaagtaccagtggggtgtgactgaaaattgcagccag
gagtttgacttcatttgcgagtttgaatctggccagagcattgcttgtgataattacaat
gccactgtacagtgtggatcaggacaagttattcaaattggagagagcttctatggacgg
aaaaaccctcactactgcgtatcggaaactcatctccagcatgatacagatgaaaactgt
agctggatcagtgtcaaagatgaaatagcaggtcagtgtcatgggcttcaagtctgccag
gtggcagcagatggcacgttctttggtgatccttgcccagctttaggaagttatttgtcc
attcactaccactgcaaggaaggcctgcagctggttgtaacagaaacttgctatgtcttt
gaaaatatcacagtcagtttgaactggctgctctctccgtactctggcaacctttcctgc
atcatcagcactggagatggccacactattgatccttactaccctctaacactggtcagc
aatgtcacatacaaatattcatatcctggagagtttactgtttttgtggaatgctctacc
agcgaatggcatgtgatggcacagaagcgggtgactgttcaagataagatggatcaacta
agcatcactgggtgctatagccagtatgaatctgggaacagctcttgctgccgcacactg
tatggggacgtgttgtggattcaagttgaactcaatggaggcaatgaagtgacctacatt
ctactagcagacaacatgacactcactgaatccagtgcaaaggaaggaatagtccctcac
aatctgacacttgacagtgcctctcaagagctgctaggcccagggatacatcaactggaa
atccgagcattcagcaacacaaccgcatcagagatctccgagagcattgctgttcactta
attgagccaatatctggtcttcaggccacattaggttctcatactctgcagctgagggag
aatttggagataaatgtctctgtgtctcatggtgccccagataagctgatatttgaagtg
actggatctaatgaaactcactcgtacaaagaagatggctctcatgtggaacctcgaacg
tacaccattcccatgcagtctgaaggcactttcctagtgaaagtggtggccatgaatgcc
ttctcaaacatgagcctggatcttgggtttatcactgtgctggcaaacaattctcatgaa
aaagattctgctaaggaagaaggtggctccacaacaaatatccaaaagacaaatgatcac
aaaagaaaaagcaaaatatatattaaaccaagtcgccatgtggaccctttcacaactgtt
gtgcttggctggccagactacaacaataattccagctttctctggtcctgtggagcatgc
tggcctaagtggaatgaatgtgtgcagcaacagacaatcctaaccaaccaatctgaggtg
caaattccaccttcctgccttcctcctccaaagtcagcagtgactgtcagggttacagtc
cgaaaccacagcaatgaagagaggcaggatgagcaatgtctttatgtgactgcaaaacaa
gatctgcagctggaaatcaggtgcgaggcaaactgcaagccagtggatgctaatgatgaa
gttgttttgagtgtctccaggcaggactcccagggcatacattataactggtatttagat
aacacgttccaaagcaagtctacacccctccctctagcctgtggcctgactggtttccag
cagaactctttgactttgcttcaaagcaacacatccctgttgaaaatgaacagctccttc
ttgcagacacagggagaagcttttcaaattaaagtaacagcaatgactcagcgtggctac
ggtgaggaaacctatcttgtcagcactgtgcctccccccgagatccccagttgttctgtg
tctcccacgcagggatcagtgctcaccgcattcacagtctcctgcagcactccatgcttg
gcggattcatgtcaatccagtcataacaggcagctcacatactgcttctatctgaaatca
aattctctcctgcactgtggcccggatcctgaactcttccaagtttatcttcctcttgga
gaacaggaaaataatttcactttatatttgacaattactgttagcaacaactttggtgat
acagttcaaacccacgcttcagtgaaggttggacaagcagacatgattgatgggaacttg
accctgcaggcttttgtgtctaagaaaacaaacaccatcctaaaagatgggaaccacagc
atgagcctcttccagctatacaagtccgtgacttcagtccttaaccaggatactcaaggg
ggaagctctaacatgtctttaccgatggacacacgaaaagagctccgagggctgatgctg
acaactctctctgctgttaatgtcacatcaatgcagacagctcttaagatgtcagaagta
ttgaaagaaatcacttacaggagtgaagagctgtctgtctcagcacaggtggaagctagc
aacactctaaaagaggtcagtgcttccctgctcagtgtaaacacagaggacagcagagat
gaccagcaattaagagatgcagctaactatctatttaatgcggtgagcaatgtccttaaa
gcttctgtacaaatcagaactgcaaacaattcagtgccagaggcagaacagagttcagca
gcacaccagctcctgaatacaattgaaaatctacagagcgcccttctgtttgggaaagaa
ccggatgacgaaccaactgtcctcaccactccttctgccttgctgtatatacacagacta
caaacagaaaacatagatggcacatccatcaacatctgcagttccagctctgccagcttt
agcctcccacctgcttcttctctcagtgttttaggagttgatgatgaaacagtggatata
aggatggtgagctttgccatgaatccatttttctccagcgacactagttttgacatcagt
ggaacagtcggaggtctaagtcttactggtccagatggctcgatcataccggtcagcaat
ctcaaagaaaacattgagataatattaccaaggctttcagcagctcaggaagataggatt
ctgttaaatctgggcaattttagcactttccaattcaatgttacctcagaaaacacatct
atagtgatccacctggaatccgaacgcgacattccactaatactctacttaggatatggt
tatcgtccaaatgaaaccaactatgatatgaaaaatcatctgttctacaacaaaacaact
agaggtgagacaaacgcttgggttcttagcccagaagaactcatttttggagagggaacc
tactatttcatggttttacaagatatggaaatggattccacagtttacgaaagggtaact
atagctgtcacttgctttgcatcccgctgcgtattctgggatgagcaccaggggaactgg
aacagctatggatgtcacgtaggaccaaaaacaaatcctagaagtacacactgtctctgc
aatcatctgaccttctttgggagctccttctttgtcttacccaatgccatagatgttagc
aaaactgcagagctatttggcacatttgtgaacaaccctgtggtggtgacaactgtagga
tgcatctttctgatatacgtgcttgcagttatttgggctcgaaggaaagacatccaggat
gatgccaaagtgaaaatcacagtactggaagacaatgacccctttgctcaatatcgttat
cttgtgacagttttcacaggacaccgccgtggtgcagccacaacctccaaggtgactctc
accctctatggactggaaggagagagtgaaccacaccatctagctgatcccaatacacca
gtctttgaacgtggaggagtggatgttttcctactctgtaccttcttccctcttggggag
cttcagagtattagattgtggcatgataactcaggagacagtccatcctggtatgtgaat
cgagtattggtccacgatctggcatgggatcagaaatggtatttcctctgtaactcttgg
ctatctgttgatattggagaatgtgtccttgataaagtgttcccagtagctacagaacag
gacatgaagcagttcagcaatctgtttttcatgaagacctccaaaggtttccaggatggg
cacatctggtactcagttttcagccgctctccacgaagttctttcacacgagcccagcgc
gtgtcatgttgcttctcactgcttctgtgcaccatgctgaccagcatcatgttctgggga
gtgccaaaggacccagccgagcagaaaatggatttgggtaagatcgagttcacgtggcag
gaagtgatgattggttttgagagctccttcctcatgttccccatcaacctgctcattgtg
cagatcttcaggaatgtacgaccccggccagccatgaaagggagggagaagaagccaaga
aagaatggtcgagtgtccccaagcccacctcccacaccacaggtcacccaggctgtctcc
ctcactccagaggcggtgataaaggatataagaagaattgccaactcactttttaaagcc
ctgaggactccagctgtcacttcagtatcagctcttggaaaatcaactaacatcaataca
cttttggcactggttgaggacattatctgccagcagaacagagctgggcaagagttttat
gatgagagcaaaaagaaggatgaccctataattgtcacattaggcacttcggctatgcaa
gaaaaaccaaaaagctcaactccagagaagggaatgtgtgaacaactgaaatacagcgat
tacaaccgctgcttgtacatgcaactccagcatgtacagatggagctggaattactaggg
ccccagaaatttcagacacctcagagttacacacaagctgttcagcaggttcagcacatg
aagaacctcctggagagccacatctgctcatcagcgtccatcagtgagaggtgttctctt
attccaagcttctctggtgacagcaagaaaagttattcttccaaaggcctgccctggtgg
tttgtgttcattgcttggttccttgttgtagccaccagtggagtatctgggttctttacc
atgctctatgggctgcattacggcaaggagaactccatcaagtggctgatctccatggcc
atctccttcttggaaagtctttttgtcacacagcccttaaaggtgctgggatttgctgct
ttttttgctctggttctgaagaaggtggaacatgaggatgaagaaaacacagctattaac
gggcctttatctacaccaggtgactcaaatcctctctttggagcccgaagggacagcgga
agcaatatttaccggccacctcctaaggctgatgttgagaaaatgaaaatcagctgcatg
aaggagcagaaagcatttgccctcctcagggaaatcctggcctatctggggtttttatgg
atgctgttactggttgcctatgggcagagagatcccaattcctactacttaaacaaacac
attgagaacagctttacagatggattccacgatatctgcagttaccaggactttttcaag
tgggcaaacaccaccttagtcaaaaatctttatggatcatataaaggattcattacagat
ggcaattccaagctggtgggtagtgctcgaattcgccaagtaagagtgaaaggagacacc
tgccctatttcccccgagctccagcatgtgattcaggaatgtcatgctccatattcccaa
caaacagaagacacatcagtttatgcagaacgctggaatacttcagtctttgataactct
tctgacttcagttcagcatggcaatatcagagtcagtccaaactgcgagggcaacccatc
tggggcaaacttgccatctacaggggaggaggatacgtggttcacctggggactgatcct
gacaacacctccagaattctccagtaccttttcaacaaagtctggctcgacaccttcaca
agagcagtgtttgtggaatttacagtctacaatgccaatgtgaacctgttctgcattgta
agcctgatgtttgaaaccaatgctttaggggccttcttcacaagtgcagagctgcaaagt
gtccggctttacccatacaccaacagtctccacatctttgtggttgcagcagaagtaatt
tatttcctctttattgtgtactacatgatagtacagggaaaactgataaagactctgaga
tggagatacttccacagcaagtggaatctcctggagatggccattatattgattagctgg
agtgctctgtcagtgtttgtgaagaggacaattcttgggacccgagacatcagctactac
caggaacacaaagaggactgtgtaagctttaatgaaacagcaagagctgatgcaattctt
ggctacctgattgcattcctagtgcttctctccacagtgaaactgtggcatctcctgagg
ctcaatcctaaactaaacatgatcacttcaactctaaggagggcatggggtgatatctct
ggattcatcactgtaattgcaatcatgttccttgcctattctattgctacaaacttgata
tttggatggaagctctactcttacaaaactctctttgacgcagcagagaccatggtcagt
cttcagctgggaatcttcaactatgaggaggtcttggactacaatccagttttaggctcc
ttcttaattggatcctgcataattttcatgacgtttgtggtactgaatctgttcatttca
gtgattctggttgcttttggtgacgagcagaagcactatcaggcttcagaagaagaggag
attgttgatttaatgctaatgaaactttgcagcttcttcgggattaaatgcaagaaggaa
gagcagccagtcactaacgataaactggaacaacctgctggtgattaa
DBGET
integrated database retrieval system
