Cuculus canorus (common cuckoo): 104059519
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Entry
104059519 CDS
T08597
Symbol
SRSF4
Name
(RefSeq) serine/arginine-rich splicing factor 4
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03040
Spliceosome
cuca05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104059519 (SRSF4)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104059519 (SRSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
104059519 (SRSF4)
Spliceosome [BR:
cuca03041
]
Common components
Common spliceosomal components
SR proteins
104059519 (SRSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
104059519
NCBI-ProteinID:
XP_053942337
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All DBs
Position
22:complement(337851..349639)
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AA seq
469 aa
AA seq
DB search
MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDL
CGERVIVEHARGPRRDSSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDL
KDYMRQAGEVTYADAHKGRKNEGVIEFKSYSDMKRALEKLDGTEVNGRKIRLVEDRPGSR
RRRSYSRSRSHSRSHSRSRHKSRSRSASSSRSKSRSRSRSVSRSRSKSRSRSKSRSRGQK
EKSRTPSKEDKSRSRSRSAEKSRNKSKDKSEVSLHNSDEKTKSRSRSKERSRSRSGSKDR
GETREGVRSRSKEKSISNARSRSKSRDESRSRSHSKDKRKGRKRSREDSRSRSRSCSKSE
KSKRRSKRDSKPSSKKKRKDSHEQSRSASKEKEHLQSESGKKEAKGEGEDAAAYQVPRSR
SRSISKSKPNVKSDSRSRSKSISKPRSKSRSSSASRSHSRSRSRSRSRS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgtttacatcgggcggctgagctaccaggcgcgcgagcgggacgtggagcgg
ttcttcaagggttacggcaagatcctcgaggtggacctcaagaacgggtatggctttgtt
gagtttgatgatctacgagatgcagacgatgctgtttatgagctgaatggtaaagatctt
tgtggggagagagtgatcgtggaacatgccagaggcccacggcgtgacagcagttacggt
tctggacgcagtggatatggttatagaagaagcggaagagataagtacggtcctcccacc
cgtacagaatacagattgattgtggaaaatttgtcaagccgctgcagttggcaggatctg
aaggattatatgcgtcaggcaggggaggtgacatatgcagatgcacacaaaggaaggaaa
aatgaaggtgtgattgagttcaaatcctattctgacatgaaaagagcccttgaaaagctg
gacgggacagaagtaaatggcagaaagattagattagtggaagacagacctggatcaaga
cggcgccgctcttactctagaagccgaagccattcgaggtctcactctcgaagcagacat
aagagcaggagccgcagtgccagtagcagtcgctccaagagtagatcaagatccaggtct
gtgtcccgttccagaagcaagagccgtagtcgaagcaagagccgtagcagaggccaaaaa
gagaaaagcaggactccaagtaaagaggataaaagtaggagccgcagcaggagtgcagag
aaatcccgaaacaaaagtaaagataaatctgaggtcagcctccataacagtgatgagaaa
acaaagagcaggagccgcagcaaggaaaggagtaggagcaggagtggaagtaaggacagg
ggagagacaagggagggtgtgaggagtaggagcaaggagaagagcattagcaatgctaga
agcagaagcaagagcagggatgagagcaggagcaggagccacagtaaggataaaaggaaa
ggtaggaagagaagcagggaagacagcagaagtagaagcaggagctgcagcaagagtgag
aaaagcaagaggcgcagcaagcgagacagcaaaccaagtagcaagaagaaaaggaaggac
agtcatgagcagtccaggtcagcctccaaagaaaaggagcacctgcaatcagagtctggc
aaaaaagaggcaaaaggtgagggtgaggatgcagctgcataccaggtgcctcgctccagg
tctaggtcgatttcaaagtcaaaaccaaatgtcaaatcagattctcgttccaggtctaaa
tccatttcaaagcctaggtccaagtctagatctagttctgcctctaggtcacactcccga
tcacggtcaaggtctcgctccagatcctaa
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