Cuculus canorus (common cuckoo): 104059529
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Entry
104059529 CDS
T08597
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03013
Nucleocytoplasmic transport
cuca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104059529
03015 mRNA surveillance pathway
104059529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104059529
03041 Spliceosome [BR:
cuca03041
]
104059529
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104059529
Spliceosome [BR:
cuca03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104059529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
104059529
NCBI-ProteinID:
XP_053942398
LinkDB
All DBs
Position
22:complement(20910..35684)
Genome browser
AA seq
741 aa
AA seq
DB search
MKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHR
TKSRSVTPAPEKKEVTPEPEPSLKPKETVVQEATSNSDIPKAPKPEPPVPETKEASPERN
SKKEREKEKEKTRQRSPSRSKSRSRSRSRSPSHSRPRRRHRSRSRSYSPRRRPSPRRRLS
PRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSP
PRKTRRLSPSASPPRRRHRPSPPASPPSKPRRSPTPQQSNRARKSRGSVSPSRASAPKHK
SSEKRESPSPAPKPRKGELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSE
EERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQIEKRWQSPVMKSRRRRSP
SPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPK
RRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPCRSNR
ETRSPPQNKRHSPSPRPRASHTSASPPPRRGTSASPQRRQSPSPSTRPIRRVSRTPEPKK
TKASTPSPRSTRRVSSSRSASGSPEPALKKHQGPPSPARSCSPSANWSPAKKAKSPTQSP
SPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKRKLQWLQQLLLWLQQIPPQHRKT
RKQRQNPKRRQKANQRTTLMT
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacaagatgaagacaaggagaagagggataaggaagataaagacaacagagaa
aaaagagacagatccaggagtccaagaagacgcaaatcaaggtctccttcccctcggagg
aggtcttcacctgtccgaagagagcggaaacgcagccattcccgctcccctcatcacaga
accaagagtcgcagtgttactccagcaccggaaaagaaagaggtgactcctgagccagaa
ccctctctgaaaccaaaggagactgttgttcaagaggcaacttcaaacagtgatatccca
aaagctcctaaacctgaacctcctgtaccagagactaaggaagcttcaccagagcgtaat
tcaaagaaggagagagagaaggaaaaagagaagactcgtcaaaggtccccaagtcggtcc
aagtcaaggtcaagatctcggtcacgttctccatctcattctcgaccaagaaggcgtcat
agatcacggtcaaggtcttactctcctagaaggcgaccaagcccgagacgacggctgtct
ccgagaagaaggagccctccaaggcgaatgcctcccccacccagacacagaagaagcaga
tcccctgtgaggcggagaagacggtcatcagcatccttatctggcagcagctcttcctcc
tcctcctcacgttcccgatcgccaccaaagaagcctcctaaaagaactgtatccagtcct
cctcggaaaacacgcaggctctctccttcagcaagccctccaaggcggaggcacagacca
tccccaccagcaagtccaccttctaaaccacgtagatctccaaccccccagcagtcgaat
cgggcaagaaaaagccgtggctctgtttcacctagcagagcatcagcacctaaacataag
agttctgaaaaaagagaatctccttcgccagcaccaaaaccaagaaaaggagaactgtct
gaatcagaagaagataaaggaggcaaaatggctgcagcagactctgttcagcagaggcgt
cagtacagacggcaaaaccaacagtcttcatctgattctggttcttcgtcttcatcagaa
gaggagagacctaaaagatccaatgtgaaaaatggggaagttggcagacgccggcgccat
tcgcattcacgcagcccatcaccatctccacgaaaacgacagaaggaatcctctcctcgg
atgcagattgaaaagaggtggcagtcaccagtgatgaaaagcaggaggaggagaagcccc
tcacccccaccagcccggcggcgacgctccccttcacctgctccccctcctcgccggcgg
cgctcaccttccttacctcgtcgaaggtctccatcaccacccccacgcagacgctcaccc
tctccacggagatactctccaccaatacagaggcggtattctccttctccgccaccaaag
agaagaacggcttctcctcctcccccaccaaaacgaagggcatccccttctccacagtca
aaacgcagagtctcccattcaccaccgccaaaacagaggagctcaccagctgctaaaagg
cgttcaccttccatatcttccaagcacaggaaggggtctcctccctgtcggtctaaccgg
gaaacacgttctccaccacaaaacaaaaggcattcaccttcaccacggcctagagcttct
catacctctgcaagcccaccaccacgacggggaacttcagcttcaccccagagaaggcag
tctccatctccaagcactagacccatcaggagggtgtcaagaacgccagaacctaagaag
acaaaggcttccacgccaagcccgcgatctacaaggcgggtgtcatcgtcacggtctgca
tcaggatcacctgagccagcactgaagaaacatcaaggacctccatcccctgctcgatct
tgttccccttctgcaaactggtcacctgcaaaaaaggcgaaaagcccaactcagagccca
tcacctgcaaggaattcagatcaagaaggaggtggaaagaagaagaagaaaaagaaggat
aagaagcataaaaaggataaaaagcacaagaaacacaaaaaacataagaagagaaagctg
cagtggctgcagcagctgctgctgtggctgcagcagataccacctcagcacaggaagacc
aggaagcagagacagaacccaaaaaggagacagaaagcgaaccagaggacaaccttgatg
acctag
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