Cuculus canorus (common cuckoo): 104059642
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Entry
104059642 CDS
T08597
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104059642 (TOPORS)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104059642 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cuca03037
]
104059642 (TOPORS)
Enzymes [BR:
cuca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104059642 (TOPORS)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104059642 (TOPORS)
UBL E3 ligases
104059642 (TOPORS)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
104059642 (TOPORS)
Cilium and associated proteins [BR:
cuca03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104059642 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
PWI_Topors
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
104059642
NCBI-ProteinID:
XP_053909859
LinkDB
All DBs
Position
Z:48302028..48328797
Genome browser
AA seq
1063 aa
AA seq
DB search
MAEPLRRLVEGARRRRRPPGQEHREAAGLGHCRTRHRLKATAAPAGLGSEAAAANMTSAD
KEFSEDSNFSPKASTSKLPTDASPDSKCPICLDRFDNVAYLDRCLHRFCFRCVQEWSKNK
AECPLCKQPFFSIFHTIRAEDDFKEYILSPSENRSFASPDGRRFRYRTTLTGERRAGRSP
SRRTLSPPDNGVLFEGLSSEPVRQRDGEIQQMIRRLASRRQASAEGRSLRQIQEEDMISF
RRALYRTGVRIRSIQDGGRYRDISAEFFRLNPACLHRLVPWLKRELTVLFGAHGSLVNIV
QHIIMSNVTRYDMESQAFADDLKPFLLNRTEHFLHEFISFARCPFNLEAYDQHANYDCPA
PSYDEGSHSDSSIITISPDTACSQGPGNSMSVTSLGQAPWDDETPGPSYSISEEVRATIA
SPLETSDSSDEDSATKNQRTKPESELQANDDSNDSDSSSDNCVIVGYVKPLAERTPEVVE
LSSDSEESIREEKREDVKKQQPIQCGGWSDSEPSRSFSPRSPPYKEDVGSCRSCLSPAAE
KTESKVDGKNKCKVKDLSPQDLSWSPSSESDAVYSPWNHKLSRKRKSRSPQSFSRNSRGS
RGHRSKREHHSKSQLKRRRSRSRDSSKHRSKRSSRRSRAQDSKVSLKSQRGSLSHESTPS
REVSRSRSRSKGHGRRRSRSRDSDRYYTRDNYQSRYQWGYAFCSRKVFGDGYESSSRRRA
QSNAVYSRQSVSPEYRIRSFIERTDLHSQRGLHERHYYCYERCRSRSRSSNRSRTRSSNR
SRTPSGGTDRMKSEKPGGKRKYKTRHLENVFTENTSLERENDPKKTFSNLSDCYKNEDIL
SDNRASSEIKHKKKKKKIRSPSVEIVYEGKATDTTRHLKKKKKKHKKKHRKHHVSNSAHS
SPVVITIDSDSSKEPESTECDSSITWTGTTQINEKENESPSSFLGRTGCDDVYRVGEETG
GTAKKYSIPTGRGDLDSDVRNADVKLREAAAEQSLAIADTSSDTPHTETATSYVQEAPAA
PSSQLSSPRTSFLECQERQPLILRLPKRLVNRSSWFDFPEEEM
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccgctgaggcgcctggtggagggcgctcgccgtcgccgccgcccgccgggg
caggagcaccgcgaggccgccggcctcgggcactgccggacgcgccacagactgaaggcg
accgcggccccggccggcctggggagcgaggccgcggcggcgaacatgacttcagcagat
aaggagttttcagaagacagcaacttttcgccaaaagccagcaccagcaagctgccaaca
gatgcatctcctgactctaaatgccccatctgcttggatagatttgacaatgttgcatat
ctagatcgctgcttgcataggttctgtttccgctgtgtccaagagtggtcaaaaaacaaa
gcagaatgccccctctgtaagcaaccgtttttttccattttccatacaattcgtgctgaa
gatgactttaaggagtacatactcagcccttcagaaaataggtcttttgccagtcctgat
ggccggaggtttcgttaccgtaccaccttaacaggggaacgccgcgctggccgttcccct
tcccgaagaacgctgtcccctcctgataatggggtattgtttgaagggctgtcgagtgaa
ccagtgcgtcagagagacggggagattcagcagatgataaggaggctggcctcaaggagg
caggctagtgctgagggcagatctctgcggcaaatccaggaggaagacatgatcagcttc
cgtagagctctgtaccgtactggtgtgcgtattcgcagtattcaggatggtggtcgctat
cgagacatttcagcagagtttttccgcctcaaccctgcttgccttcacaggttggttcct
tggctgaagcgcgaactcacagtcctgtttggtgcccatggatctttggttaatatcgta
cagcacattatcatgagtaatgtgactaggtatgatatggaaagtcaggcctttgctgat
gatttaaagccatttttgctgaatcggactgagcacttcttacatgagttcatcagcttt
gcccgttgtcctttcaacttagaagcatatgatcaacatgccaattatgactgccctgcg
ccatcatatgatgaaggaagccactcagactcgtcaattattacaatatctccagacaca
gcatgttctcaggggccaggtaacagtatgtctgtgactagtcttggtcaggccccctgg
gatgatgaaactccgggcccttcctattccatttccgaagaggttcgtgcaaccatagct
tctcctttggagacgtcagatagttctgatgaggacagtgccacaaagaatcaaagaacc
aagccagagagtgagttacaggctaatgatgactcaaacgacagtgactcttcctcagac
aattgtgttattgttgggtatgttaagccgttagctgagaggactcctgaggtggttgag
ctgtcctcggactccgaggagtccatcagggaagagaaaagagaagatgtgaagaaacag
cagccaatccagtgtggtggctggagtgatagtgaaccaagcaggagtttctcaccacgt
tcccccccatataaggaggatgtaggtagttgtagaagctgcttgtctcctgcagctgag
aagacagagtcaaaagttgatgggaagaacaaatgtaaggtaaaagatctgtctccacag
gacttgagttggagcccttcttcggagagtgacgcagtatactccccttggaatcacaaa
ttgtctagaaagaggaagtccaggagcccacaatcgttttcacggaactctcgaggcagt
cgtggccatcggtctaagagagagcatcatagcaaaagccaacttaaaaggagacgatcg
agaagcagagatagtagcaagcataggagcaaaagaagcagcaggaggtcaagggctcag
gacagcaaagtctctctaaaaagtcagagaggttctctaagtcatgagagtactccgtcg
agagaagtaagcagatcacgatcacgtagcaaaggccatggtagaaggaggtcaagaagt
agagacagtgatcgttattacacaagagacaattatcaaagtagatatcagtggggttat
gctttctgtagtcgaaaggtgttcggagatggctatgaatcctccagcagaaggagggct
cagtctaatgctgtctattcaaggcaatctgtgagtccagaatacaggatacgatcattt
attgaaaggacggatctgcatagccagaggggactccatgagagacactattactgttat
gaaagatgcaggtcaaggagtcgatcgagcaacagatcaaggacccgatcaagcaacagg
tcaaggacgccttctggaggaactgacagaatgaaaagtgaaaagcctggtggaaaaagg
aagtacaaaactcgtcacttggagaatgtgttcacggagaacacaagtctagaaagagaa
aatgacccgaagaaaactttctctaacctcagcgactgctacaaaaatgaagatatcctt
tcagacaatcgagcaagcagtgagataaagcataagaaaaagaaaaaaaagatcaggagt
ccaagtgttgagatagtctatgaaggaaaagcaacagacacaacaaggcatcttaaaaag
aaaaagaaaaagcataagaagaaacacaggaaacaccatgtgagtaactcagcacattct
tctcctgtggtgattacgattgatagtgatagtagcaaggagccagagagtactgaatgt
gatagcagtattacttggacaggcacaactcagataaatgagaaggaaaatgaatctccg
tcttctttcctgggaaggacagggtgtgatgatgtttacagagttggagaggaaaccgga
ggaacagccaaaaagtacagcattcctactggaaggggagacttagacagtgacgttaga
aatgctgatgtcaaacttcgagaagcagcagcagagcagagtcttgccatagcagatact
agcagtgacacccctcacacagaaactgcaactagctacgttcaagaagcaccagcagcg
ccttccagtcaactgtcttcccccaggacttccttcctagagtgtcaagagagacaacca
ttgatactaagactgccaaagagacttgtcaacagatcctcttggtttgattttcctgaa
gaagaaatgtag
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