Cuculus canorus (common cuckoo): 104059713
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Entry
104059713 CDS
T08597
Symbol
GRIA1
Name
(RefSeq) glutamate receptor 1 isoform X1
KO
K05197
glutamate receptor 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04080
Neuroactive ligand-receptor interaction
cuca04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104059713 (GRIA1)
04082 Neuroactive ligand signaling
104059713 (GRIA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104059713 (GRIA1)
Ion channels [BR:
cuca04040
]
Ligand-gated channels
Glutamate (ionotropic)
104059713 (GRIA1)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF659
DUF2061
Motif
Other DBs
NCBI-GeneID:
104059713
NCBI-ProteinID:
XP_009559717
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Position
14:complement(13658991..13787894)
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AA seq
902 aa
AA seq
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MQHIFAFFCTSFLGAVLGANFPNNIQIGGLFPNQQSQEHAAFRFALSQLTEPPKLLPQID
IVNISDSFEMTYTFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVETSNQ
FVLQLRPELQDALISVIEHYNWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTT
TEEGYRMLFQELEKKKERLVVVDCESERLNIILSKIIKLEKNGNGYHYILANLGFMDIDL
TKFKESGANVTGFQLVNYTDAVPARIMQQWRNNDAREHPRVDWKRPKYTSALTYDGVRVM
AEAFQNLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVHFEGLSGNVQFNEKGR
RTNYTLHVIEMKHDGIRKIGYWNEDEKLVPAAIDTQSGNESTSLQNRTYIVTTILEDPYV
MLKKNANQFEGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTKTWNGMVGE
LVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWHTEEFEEGRDQPANDQTNEFGIFNSLWFSLGAFMQ
QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIA
YGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLES
TMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQGVLDKLKSKW
WYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSESKRMK
GFCLIPQQSINEAIRTSTLPRPAAAGGSGENGRVVSHDFAKSMQTIPCMSHSTGMSLGAT
GL
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacatttttgccttcttctgcaccagtttcctaggggcggtgttaggggctaat
ttccccaacaacatccagataggggggttatttcctaatcagcagtcccaggaacatgcg
gcttttaggtttgcgttgtctcagctcacggaaccccctaagctccttccccagatcgac
attgtgaacattagcgacagctttgaaatgacatacaccttctgctcacagttctccaag
ggcgtctatgccatctttggattttatgagagaaggaccgtcaacatgcttacatctttc
tgcggagctctccatgtctgcttcataacgccaagcttccctgtcgaaacgtccaaccag
tttgttctccagcttcgtccagaactgcaggatgccctcatcagtgtcatcgagcactac
aactggcagaagtttgtgtacatttacgatgctgaccgggggttgtcagtcctacagaaa
gtgctagacactgcagccgagaagaactggcaggtgacagctgtcaacatcctgacaacg
acagaagaggggtaccgcatgctctttcaggagctggagaagaagaaggaaagactggtg
gtggtggattgtgaatctgagcggctaaacatcatccttagcaagatcatcaagcttgaa
aagaatgggaatgggtaccactacattctggcaaatttgggattcatggatatcgacctg
accaaattcaaggagagtggagccaatgtaactggcttccagttggtgaattacacggat
gctgttcctgccagaatcatgcagcagtggaggaataatgatgccagggagcatcctcgt
gtggactggaagaggccaaagtacacgtcagctctaacatacgatggggtccgagtgatg
gctgaggcgtttcagaacctacggaggcagcggatcgacatctcccgtcgcggcaatgct
ggagattgccttgccaacccagctgtgccctggggacaaggcatcgacatccagagagca
ctgcagcaggtccattttgaaggattgtctggcaacgttcagtttaatgagaagggacgg
aggaccaactacactctccatgtgattgagatgaaacacgatggaatcagaaagattggc
tactggaatgaagatgagaagctggttccagcagccatagatactcaaagcggcaatgag
tccacaagcctccagaacaggacttacatagtcacgactatcctagaagacccatatgtg
atgctcaagaagaacgccaatcagtttgaaggcaatgagaggtatgaaggttactgtgtg
gagctcgctgctgagattgcaaagcatgttggctaccactacaggctggagattgtcaga
gatgggaagtacggagcccgggaccctgacaccaaaacgtggaatggcatggtgggagaa
ctcgtttatgggagggcggatgtggctgtggcaccgttaaccatcactctggttcgagaa
gaagttatagacttttccaaaccgttcatgagcttaggtatctcgatcatgataaaaaaa
cctcagaagtccaaaccaggagttttttcttttctggatcctttggcatatgagatatgg
atgtgcattgtttttgcttacattggagtgagcgttgtcctcttcctggtgagtcgcttc
agcccttacgagtggcacactgaggaatttgaggaaggacgggatcagccagcgaatgac
cagacgaatgagtttgggatattcaacagtctctggttctccctaggagcttttatgcag
caaggatgtgatatttctccaaggtctctctctggccgcatagtcggtggcgtctggtgg
ttcttcaccttgatcatcatatcctcctacacagctaacctggctgccttcctcaccgtg
gaaaggatggtttctccaattgagagtgcagaggacctggccaagcagacagaaattgcc
tatggaaccctggaagctggctccactaaagagtttttcaggagatccaaaatagcagtc
tttgagaagatgtggacatacatgaagtcagccgaaccctccgtttttgtgaggacaacg
gaagaggggatgatccgcgtgaggaagtcaaaaggaaagtatgcctacctcttggagtcc
acgatgaacgagtacatcgagcagcggaagccctgtgacactatgaaggtgggaggtaac
ttggactccaaaggctatggcattgcaacgccaaaggggtctgcactgagaggtcccgta
aacctagcggttttgaaactcagtgagcaaggcgtcttagacaagctgaaaagcaaatgg
tggtacgataaaggggaatgtggaagcaaggactccggaagtaaggacaagacaagcgcg
ctgagtctcagcaatgtggcaggggttttctatatcctcatcggtgggctcggattagcc
atgctggttgccttaatcgagttttgttacaagtccagaagtgaatcaaagcggatgaag
ggtttttgtttaatcccacagcaatcaatcaacgaagccatacggacatcaacccttccc
aggccagctgcagcaggaggcagtggagaaaacggacgtgtggtcagccacgatttcgcc
aaatccatgcagacgatcccgtgcatgagccacagcaccggcatgtccctgggagctacg
ggattataa
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