Cuculus canorus (common cuckoo): 104059745
Help
Entry
104059745 CDS
T08597
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104059745 (MMS19)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104059745 (MMS19)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104059745 (MMS19)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
104059745 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_ECM29
RIX1
Motif
Other DBs
NCBI-GeneID:
104059745
NCBI-ProteinID:
XP_053927148
LinkDB
All DBs
Position
7:complement(14981218..14997389)
Genome browser
AA seq
1018 aa
AA seq
DB search
MAAASALAAAVSDFVAGQQDGPAEAVAAGVKDGSWTVLQLVEALGSCLENTDHRTRGRGI
QLLSQVLLQCYSLLQEKEVLHLVLFYENRLQDHHLVIPSVLQGLRALSMCEVLSPGLAVS
VLKAIFQEVHVQSLLQLDRHTVYSIITNFMGTREEELKGLGADFTFGFIQVMDGEKDPRN
LLVAFQIVRDLIAKNYALGPFVEELFEVTSCYFPIDFTPPPNDPHGIQREDLILSLRAVL
ASTPQFAEFLLPLLIEKMDSDLQSAKLDSLQTLTACCAVYEQKELQEFLPSLWSALRREV
FQTASEKVETECLAALHALSACLSRSVLSSDTEDLLDSFLSSILQDCRHHLCEPDMKLVW
PSAKLLQAAASASLRAYHRVTSSVLPLLLEQYTKHPQSSQRRTILEMLLGFLELQQKWGH
VEEDESTLLLLRDQVCSVVFSALTDPSVQLQLVGIRALMVLGSLQGFLSPSDLELVVDHL
IRLALREEDSQSSEAAMEAAGTLAPVYPKVFIGCMIPRLEEELQSEREESSRDHCSLRQR
CLQALAAVSTHTSIVRETVPVLLQHLWKVQKGSEAGNARDVVSACQSLHRVALQCQQDAE
SCWFYHQAVVPCLLAMAVQAAVQESARPLLDKALLEEEVLAAMVPVISAATTHLSPELAA
QSVSHVVPLFLDGEVSFLPQNNFPCSFQPFQDGECLEAQRRLVALLMAFICSLPRNVVIP
QQERLLRELLALTCSCNCPFTATTAAKCFAGLVNKHPAGQQLDEILELAVNTMEPSLAEG
SRRMQALTLLLWVTKALVLRYHPLSSRLTDKLLGLLGDAELGPAAADGFALLMAESPDVL
HKGCHADVRIMFRQRFFTDNVPKLVQGFHGAGPDVKANYLKGLSHVLNHLPKPVLVTELP
TLLSLLLEALSCSDRVVQLSTLSCLQPLLLEAPQIMSLHVDTLVTKFLSLTSSPTMAVRI
AALRCAHALTSLPTTVLLPYKARVIRALAKPLDDKKRLVRKEAVAARGEWFLLGSPGR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcctcggcgctcgcggccgccgtgagcgacttcgtggccgggcagcaggat
gggcccgccgaggcggtggcggcgggggtgaaagatgggagctggaccgtgctgcagctt
gtggaagccctggggtcttgcctggagaacacagatcatcggacacgtggacgaggcatc
cagctgctatcacaagtcctgctccagtgttactcccttctccaggagaaggaagtgctg
catctggtcctgttctatgagaaccggctgcaagatcatcaccttgtgatcccctcagtg
ctccagggactccgagcactgagcatgtgtgaggtgctgtctccagggttagcagtgtct
gtgctcaaagccatctttcaggaggtacatgtgcagtcgctgctgcagctggaccgccac
acagtctacagcatcatcaccaacttcatgggcaccagggaggaagagctgaaaggcctg
ggtgctgacttcacctttggcttcatccaggtgatggatggagagaaggatccccgcaac
ctgctggtggccttccagattgtgcgtgatctcattgccaagaactatgccctgggtccg
tttgtggaggagctgtttgaagtgacatcctgctacttccccattgattttactccacct
cccaatgaccctcatggcatccagagagaagacttgatcctgagcctccgggctgtgctg
gcctccacaccacagtttgctgagttccttctccctctgctcattgagaagatggactca
gacctgcaaagtgccaagcttgactccctgcagacgctgactgcttgctgtgccgtttat
gagcagaaggagctgcaggaattcctccccagcctctggtcagccctgcgcagggaggtg
ttccagacagcgagtgagaaggtggagacagagtgcctggccgcactgcacgccctctct
gcctgtctctcccgctctgtgctcagctctgacaccgaggacctgctggactccttcctc
agcagcatcctgcaagattgcaggcaccacctgtgcgaacctgacatgaagctggtgtgg
ccaagtgccaaactcctgcaggcggcagcaagtgcctccctccgtgcctaccaccgtgtc
acctccagcgtcctgcccctgctgctggagcagtacaccaaacacccgcagagcagccag
aggaggacaatcttggaaatgctgctgggcttcctggagttgcagcagaagtggggacat
gtggaagaagatgagagcactctgctgttgctccgagaccaggtttgctctgtagtgttc
tcggcgctgacggatcccagtgtgcagctgcagctggtcgggatcagggcactgatggtc
ctgggctccctgcaaggctttctgtctccctctgatctggagctggttgtggatcacctc
atccgtctggctctgcgtgaggaggattcccagagcagtgaagcagcaatggaggcagcc
ggaactctggcccctgtctacccgaaagttttcattgggtgcatgatacccaggcttgaa
gaggagctgcagtcagagcgagaggagagctcccgtgaccactgctccctgcggcagcgc
tgcctgcaggccctggcagccgtgtccacccacaccagcatcgtgagggagaccgtccct
gtcctgctgcagcatctctggaaggtgcagaaagggagcgaggccgggaacgcccgagac
gtggtctctgcgtgccagagcctgcaccgcgtggccctgcagtgccagcaggatgcggag
agctgctggttctaccaccaggctgtggtgccctgcctgctggccatggccgtgcaggct
gccgtgcaagagagcgcccgcccgctgctggacaaggcgctgctggaggaggaggtgctg
gctgccatggtccccgtcatcagcgctgccaccacccacctgagcccagagctggctgcc
cagagcgtctctcatgtggtgcccctcttcctggatggagaggtctccttcctgccccag
aacaattttccctgttccttccaacccttccaggatggggagtgcttggaggcacagaga
cggctggtcgccctcctcatggccttcatctgctccttgccccgcaatgtggtaattcct
cagcaggaacggctgctccgggagctgctggcactgacctgctcctgcaattgccccttc
acggccaccacagctgccaagtgttttgcggggctagtgaacaagcatccagcaggacag
cagctggatgagatcctggagcttgcagtgaacacgatggagcccagccttgcagagggg
tcccgccgaatgcaggcactcaccctgctgctctgggtgaccaaagccttggtgctgcgc
taccaccccctgagctcccgcctgacagacaagctgctgggcctgctgggcgatgcagag
ctgggccctgctgcagctgacggcttcgcactgctcatggccgagtccccggatgtgctg
cacaagggctgccacgctgacgtgcgcatcatgttccgacagcgtttctttaccgacaat
gtccccaagctggtgcagggcttccacggggctggccccgatgtgaaggccaattacctg
aagggtttgtcccatgtgcttaaccacctccccaagcctgtgctggtgacagagctgcct
acgctgctttccctcctgcttgaggccttgtcctgctcagaccgcgtggtgcaactctcc
acacttagctgcctccagccactgctgctcgaagctccccagatcatgagcctgcatgtc
gacacactggtcaccaagttcctcagcctcacctccagccccaccatggctgtccgcatc
gccgccctgcgctgtgcccatgcgctcaccagcctgcccacaacagtgctgctcccctac
aaggccagagttatccgggcgctggccaagcctttagatgacaaaaagaggcttgtgcgg
aaggaggcagtagcagcacggggggaatggttcctcctggggagcccaggcaggtga
DBGET
integrated database retrieval system
