Cuculus canorus (common cuckoo): 104059747
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Entry
104059747 CDS
T08597
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cuca03009
]
104059747 (RRP12)
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
90S particles
Other 90S particles
104059747 (RRP12)
Pre-60S particles
Other pre-60S particles
104059747 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
104059747
NCBI-ProteinID:
XP_053928195
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All DBs
Position
7:complement(14954802..14965961)
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AA seq
1296 aa
AA seq
DB search
MARSGRLRSGAAAKLKRWRKGHSSDSNPETRQHRLAARSRFCSRPAEKSNLTVDAVKLHN
ELQSGSLRLERPSDSAQLRMEEDDAGEAATQKSSGTFLSGLSDCTNVTFSKVQRFWESNS
AAHKEICAVLAAVTEVIRSRGGKESETEYFAALMTTLEAVESPESLSAVAYLLNLVLKRV
PSPVLIKKFSDASKAFMGIISSQACSSSTSALRWVLSCLATLLRKQDLAAWTYPVTLQVY
HGLLSFCVHTKPKVRKAAQYGVCSILRGSEFMFGDAAPEHHPAAPSTAKFCVQEIEKAGG
IKEATTTLHILALLRDLLPCFPAAVVKTCCETLLRVMTLSHVLVTECAMQAFHSLFSAQA
SVACLPAELNAQIITALYDYVPSTSDLQPLLTWLTTMERAHINLGRLQKDLCWAHLPRLF
SAAMNCFLSSHSQVVSTAAQTLETILSECVAPHMEDLGTVSASAPAPAAYLCKMFKSVED
GLTYRFHAAWDEVLRVLEVFFETCGKQCHPIMRKCLRSLCDLRLSPHFPYTTEVDQAVGA
AVSAMGPEVLLEAVPLEIDGKEETLDFPRSWLLPVLRDYVQGARLGFFTSYFLPLAASLK
SRALEFTQAGKSVEAKIYDTLQWQVWTLLPGFCTHPTDVLGAFKGLARTLGMAISERPDL
RPTVCQALRTLIHKGCVTDAERAEVGRFAKNFLPILFNVYSQPEEDGSNSAQRRSVLDTV
RAYLTITEPQMVCGFLQKASEKLTSSENSEFARLSILDLVVAMAPYADEQSLDSLYRTIQ
PSLQSKERSMQKKAYRVLEEVCAAPHAPCQAFVRSHLRDLQAVLLDSLKTAASPAKRPRL
KCLFHIVKQLSAEHEPFITALVPEVILCTKEVSVGARKNAFMLLVEMGHAFIRFGPTPQE
AMQRFLLLVYAGLTGSVTMISCTVLALTRLFFEFKDQLELSVVEQLLQNVCLLVASRTRD
VVKAALGFLKVTLLLVDTKLLAKHIQTMLEALGNLSDDMRRHFRMKLRNLFTKFIRKFGF
ELVKGLLPAEYHKVLVNIRKAEARNRKQRALRKAAADTDEEEAPPPQPKGDSMEEILADS
EDEEEEEEERQRSKEWKKQARQKGQAWLKEGEEDEPLNFLDPNVSQRVLATKPGPRRSRG
VSHDFQVSEDGRLIIQEEEEEEVDDDEAKGVDEEIADVLQDVGLRSKKSQKRRFREEPDD
EEPEARTYSQYRPGGSGIHRQLHKEPAFGAEYRSKKGKGDVKKKGQLDPYAYIPLNRAKL
NRRKRAKMQGQFKGLMKGAQRGARAGRRSHLKAQRP
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggagcgggaggctccgctcgggcgccgccgccaagctgaagcggtggcgaaag
gggcacagcagcgactccaaccctgagacccgccagcaccgcctggccgcccgcagccgc
ttctgcagccggcccgcggagaaaagcaacttgacggtagatgcggtgaagctgcacaat
gaactgcagtcagggtccctgcgtttggaacggccgagtgacagcgcacagctccgtatg
gaggaggatgatgctggggaggctgccacacagaagtcctctggcaccttcctgagcggc
ctgagcgactgcaccaatgtgaccttcagcaaggtgcagcgcttctgggagtccaactct
gctgctcacaaagagatctgtgcggtgctggcagctgtgacagaggtgatccgctcgcgt
ggaggcaaggagagtgaaacagagtactttgctgcgctgatgaccactctggaagcagtg
gagtcccctgagtcgctgtctgctgttgcctaccttcttaacctcgtcctaaagcgggtc
ccaagtcctgtgctgataaaaaagttctcggatgcctcaaaagccttcatgggtatcatc
tcctcgcaggcctgcagcagctccacttctgccctgcgatgggtcctctcttgcctggcc
acactgctgcggaaacaggacttggcagcttggacctaccctgtcaccctccaagtctat
catggtttgctcagcttctgcgttcataccaagcccaaggtacggaaagcagcgcagtac
ggtgtgtgctccatcctgaggggcagtgagttcatgtttggagatgcggccccagagcat
caccccgcagcaccctccactgccaagttctgcgtgcaggagatcgaaaaagctggaggc
atcaaggaagccaccaccaccctgcacatccttgccctgctgcgggacctgctgccctgc
ttccctgcggctgtggtgaagacctgctgtgagaccttgctccgcgtcatgaccctcagt
cacgtgctggtgacagaatgcgccatgcaagcctttcacagcctcttcagtgcccaggcc
agcgtggcctgcctgccagctgagctgaacgcccaaatcatcaccgccctctatgactac
gtgcccagtacgagtgacctgcagccgctgctgacctggctgaccaccatggagcgggct
cacatcaacctgggcaggctgcagaaggacctgtgctgggctcacctgccccgccttttc
tcagctgccatgaactgcttcctctcctcacactcccaggtggtgtcaacagcagcacag
acactggagaccattctgagcgagtgtgttgctccccacatggaggacctgggcaccgtc
tctgcatctgccccagcccctgctgcctacctgtgcaagatgttcaaatcagtggaggac
ggcctgacatatcgcttccacgcagcatgggatgaggtgctgcgggtgctggaggtcttc
tttgagacatgtgggaagcagtgccaccccatcatgaggaagtgtctccgatccctgtgt
gacctacgtctctccccacacttcccctacaccactgaagtagaccaggcagtgggggct
gccgtgagtgccatgggccctgaggtgctgctggaagccgtacccctggagattgatggc
aaagaggagacgctggatttcccccgcagctggctcctgccagtgctgcgggattacgtg
cagggtgcacgtcttggcttcttcaccagctacttcttgcccttggcagcttccctgaaa
agcagagccctggagtttacacaggcggggaagagcgtggaggccaagatctatgacacg
ctgcagtggcaggtctggaccctgctacccggcttctgcacccaccccacagacgtgctg
ggggccttcaagggtctggcgcgcactctgggcatggctatcagcgagcgcccggacctg
cgccccaccgtgtgccaggccttgcgcaccctcatccacaaaggatgcgtgacagatgcg
gagcgggcagaagtgggtcgctttgccaaaaatttcctgcccatcctgttcaatgtgtac
agccagcccgaggaggatgggagcaacagcgctcagcgccgctctgtgctggacactgtc
cgagcttacctgaccatcactgagccccaaatggtgtgtgggttcctgcagaaagccagt
gagaagctgaccagttctgagaactccgagtttgccaggctctccatcctggacctggtg
gtggcaatggcgccctacgcagatgagcagtccctagactccctgtaccgcactatccag
ccttcccttcagagcaaggagcgcagtatgcagaagaaggcgtaccgcgtgctggaggag
gtgtgtgccgctcctcatgccccctgccaggccttcgtccgctcccacctccgggatctg
caggcagtgctgctggactcgctcaagaccgcggcatccccagccaagaggccccggctg
aagtgcctgttccacattgtgaagcagctctctgcagagcatgagcccttcatcaccgcc
ctggtcccagaggtcatcttgtgcaccaaggaggtgtcggtgggggctcgcaaaaacgct
ttcatgctgctcgtggagatggggcatgccttcatccgctttggacccacgcctcaagag
gccatgcagcggttcctgctccttgtctatgcggggctcacaggctcggtcaccatgatc
agctgcacagtgctggcactgacccgcctgttcttcgagttcaaagatcagctggagctg
agcgtggtggagcagctcctgcagaatgtctgcctactggtggcctctcgcacacgggac
gtggtgaaggcggccctgggcttcctgaaggtcacactgctgctggtggacaccaagctg
ctggccaagcacatccaaacaatgctggaggccctggggaacctctcagatgacatgaga
cgccacttccgcatgaagctgcgaaacctctttaccaagttcatccgcaagtttggtttc
gagctggtgaaggggctgctgccagctgaataccataaagtgctggttaacatccgcaag
gcagaagcccggaaccgcaagcagcgtgccctgaggaaggcagctgcagatacagatgaa
gaggaggcaccaccaccacagcccaaaggagacagcatggaggagatcctggctgactca
gaggacgaagaggaggaagaagaggaacggcagcggagcaaggagtggaagaagcaagca
cggcagaagggccaggcctggctgaaggaaggggaagaggatgagcccctcaatttcctg
gaccccaacgtgtcccagcgggttctggccaccaagccaggccccaggcgatccagagga
gtgagccatgacttccaggtgtctgaggatgggcgcctgatcatccaggaagaagaggag
gaggaggtggacgatgatgaagccaaaggagtggacgaggagatagcggatgtgctgcag
gatgtgggtcttcgcagtaagaaaagccagaagcgtcggttcagagaggagccagacgat
gaggagcctgaggccaggacctactctcagtacagacctggaggctctgggatccacagg
cagctgcacaaggagccagcctttggtgcagagtacagatccaagaaaggcaaaggtgac
gtgaagaagaaaggacagctggatccctatgcttacatccccctgaacagagctaaactc
aacagaaggaagcgggcgaaaatgcagggccagttcaagggactgatgaagggtgcccag
cgcggggccagagctggccgcaggagccatctgaaggcccagcgtccctga
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