Cuculus canorus (common cuckoo): 104059904
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Entry
104059904 CDS
T08597
Symbol
TBC1D9B
Name
(RefSeq) TBC1 domain family member 9B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104059904 (TBC1D9B)
Membrane trafficking [BR:
cuca04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104059904 (TBC1D9B)
Endosome - Golgi transport
Rab GTPases and associated proteins
104059904 (TBC1D9B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_7
Ric8
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
104059904
NCBI-ProteinID:
XP_053935602
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All DBs
Position
14:15015121..15038454
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AA seq
1259 aa
AA seq
DB search
MWLGPEEVLLAGALWVTERANPFFLLQRRRGHGKGGGLTGLLVGTLDVVLDSSARVAPYR
ILHQTQDSQVYWAVACGSSRKEITKHWEWLENNLLQTLSIFDNEEDITTFVKGKIHGIIA
EENKNEQPQSEEDPGKFKEAELKMRKQFGMPEVEKLVNYYSCSYWKGRVPRQGWLYLTVN
HLCFYSFLLGKEVTLVIQWVDVTQLEKNATLLFPECIKVSTRDGELYFSMFLNINETFKL
MEQLANIAMRQLLDNESFLQEKSLPKPRKPLKNISALKRDLDARAKNECYCATFRLPKDE
CLDGHTDCTLWTPFNKMHIPGQMFVSNNYICFASKAEEACHLIIPLREVTIVEKADSSSV
LPSPLSISTKSKMTFFFANLKDRDFLVQRISDFLQRTPSKKPCDREWKWNLADPGCEEVP
ELPSSSPLAISPTSALSNRPANFSAEEVPTASQGLLKLFRRNSDELLGPKGAIFVPVKAK
EKMKEESWNIHFFEYGRGMCMYRTAKTRELVQKGIPESLRGELWLLFSGAWNEMVTHPGY
YADLVEKSMGKYNLATEEIERDLHRSMPEHPAFQNELGIAALRRVLTAYAFRNPTIGYCQ
AMNIVTSVLLLYCNEEEAFWLLVALCERMLPDYYNTRVVGALVDQGIFEELTREYLPQLS
EKMQDLGVISTISLSWFLTLFLSVMPFESAVVIVDCFFYEGIKFILQVSLAILDANMEKL
LQCCDEGEAMTILGRYLDNVVNRQSVSPPIPHLHALLTSGDDPPLEIDIFELIKTSYEKF
SNLKADDIEQMRFKQRLKVIQSLEDTAKKSVVRAVSGDIGFSIEELEELYVVFKAKYLMS
CYWGNNRAAAARRDQSLPYLEQYRIDMEQFKDLFISLTPWSCGAHTPVLAGRLFRLLDEN
RDSLINFKEFVTGMSGMYHGDLTEKLKVLYKLHLPPALNPEETESALEATSYFTEDVTTE
VSPFVSELDFCLHCESQETHEDKGRRNENGPEKDEKGTSPQDYRYYLRMWAKEKESKKET
IKDLPKMSQEQFIELCKTLYNMFSEDPVEQELYHAIATVASLLLRIGEVGKKFSNRPMRK
SEDCKANNTQDPVSEEESPTSEQSQNPAVEQQPQADHEDKTCGDAQPEKAQQENQTLGDG
LGEGQSSPLQLLSDDETKDDMSMSSYSMVSTGSLQCEDIADDTVLVGCEGSSSAARYGST
IDTDWSISFEQILASMLTETALVNYFEKKVNILQKIKDQKKMERQFSSSSDYELSSVSG
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcgggcccgaggaggtgctgctggccggggcgctctgggtcaccgagagagcc
aaccccttcttcctgctgcagcgccggcgggggcacggcaaggggggcggcctcaccggt
cttcttgtgggaacgttggatgtagttttggattccagcgccagagttgccccgtaccgt
attctgcaccagactcaggactctcaagtgtattgggcagtggcctgtggatcatctcgt
aaagagatcacaaagcactgggaatggctggagaataacttactgcagactctctccatc
tttgacaatgaagaagatatcaccacctttgtcaaaggaaagatacatggaattattgct
gaagagaacaagaatgagcagccccagagtgaagaggatccaggtaaattcaaagaggct
gaactgaagatgcggaagcagtttgggatgcccgaggtggagaagctggtcaactactat
tcatgcagctattggaaggggcgtgtacccaggcagggatggctgtacctcaccgtcaat
catctctgtttctactccttcctgctgggcaaagaggttacactggtgatccagtgggtg
gatgtaacccagctagaaaaaaatgctacgctgctgttccctgagtgcattaaagtaagc
acaagggatggtgaactctatttttccatgtttctcaacatcaatgagacattcaagctg
atggagcagttggctaacattgctatgcgacagctattggataatgagagcttcctacag
gagaagtccctcccaaagcccaggaagcctcttaagaacatctctgcattgaaaagagac
ctggatgctcgagccaaaaatgagtgctactgtgccactttccgattgcctaaggatgaa
tgcctggatggacacacagattgtaccctgtggacaccattcaacaaaatgcacattcct
ggccagatgtttgtttccaacaattacatctgttttgccagcaaggcagaggaggcctgt
cacctcatcattcctctcagggaggtgacaatagttgagaaagcagatagttccagtgtc
ttgcccagccctctgtccatcagcactaaaagtaaaatgaccttcttcttcgccaatctg
aaagacagagatttcttggtgcagaggatctctgacttcttgcagagaacaccatccaag
aaaccgtgtgacagggaatggaagtggaatttggctgatcctggctgtgaggaggtccca
gagctgccttccagcagcccactcgccatcagtcccacctctgctctcagcaatcgacct
gccaacttctctgccgaggaagtgccaacagcctcgcagggactgctcaaactgttcaga
agaaattcggatgagctcttgggacccaaaggcgccatatttgttcctgtgaaggcaaag
gagaagatgaaggaagagtcttggaacattcatttctttgaatatggccgagggatgtgt
atgtatcgcactgccaagactagggagctggtgcagaaaggaatcccagagagtcttcgt
ggagagctgtggctgcttttctcaggggcttggaatgagatggtgactcatcctggttac
tatgcagatcttgtggaaaagtcaatgggaaagtacaatcttgctacagaggaaattgag
agagatctgcaccgttctatgccagaacatcctgccttccagaacgagctgggaattgct
gccctccggagagtgttaacagcttatgcattcagaaatccaacaattgggtattgtcag
gccatgaacatcgttacatcagtgctgttgctatactgcaacgaggaagaggctttctgg
ctcctggtggctttatgtgagcggatgttgccagattactacaacacaagagtagtgggt
gcattggtagaccaaggcatctttgaagaacttacacgagagtatctcccacagctgtca
gaaaagatgcaggacttgggagtgatttccaccatatccctttcctggtttctcactctc
tttctcagtgttatgccttttgagagcgccgtggtcattgtcgactgttttttctatgag
ggaatcaagtttatcttgcaggtgtcattggccatacttgatgccaacatggagaagctg
ttacaatgctgtgatgaaggtgaagccatgactattctgggcagatatttggacaacgta
gttaacagacagagcgtctctccccctattccccacttgcacgccttactgacgagtgga
gatgacccgccacttgagattgacatctttgaactcatcaaaacatcctacgaaaaattc
agcaatttgaaggcagatgacattgaacaaatgcgttttaaacaaaggctgaaagtgatc
cagtctctggaggatacagccaagaagagtgtggtccgagctgtgtctggtgacattggt
ttctctattgaagaactagaagagctgtatgtagtgttcaaggcaaagtatctgatgagc
tgttactggggaaataaccgtgctgcagctgcccgccgagatcagagtttgccctacttg
gagcagtatcgcattgacatggagcagttcaaagacctgttcatcagtctgaccccctgg
tcgtgtggcgcacacactcctgtgttagcagggcgtttgttccggcttctggatgagaac
agggattctctgattaacttcaaggaatttgtgacagggatgagtgggatgtaccatggt
gacctcactgagaaactcaaagtactttacaaactgcacctgcctcctgctctgaatcca
gaggagacagagtctgctttggaggccacaagttatttcacagaggatgttacaacagaa
gtatctccttttgtctcagaactggatttctgcctgcactgtgagtctcaagaaacccat
gaagataaaggtagaagaaatgagaatggtccagaaaaagacgagaaaggtaccagtcca
caggactatagatactacctaaggatgtgggccaaggaaaaagagtccaagaaagaaacc
attaaagatctccccaaaatgagtcaggaacaattcatagagttatgcaagaccctttac
aacatgttcagtgaggacccagtggagcaagagctgtaccatgccattgccacggtagct
agtctccttctgcgaattggagaggttgggaaaaaattctccaacagacccatgaggaag
tctgaggactgcaaagcaaacaacacccaagatcctgtgagcgaagaggagtcgccaacg
tctgaacagagtcagaatccagcagtggagcagcaaccccaagctgaccatgaggacaaa
acatgtggagacgctcagcctgaaaaagcacagcaggagaaccagactctaggagacggg
ttaggggaagggcaaagctctcctttacagctgctatcagatgatgaaaccaaagatgac
atgtccatgtcttcctactcaatggtcagcacaggctccctgcagtgtgaagacattgcg
gatgacacggtcctggttggctgtgaaggcagcagctcagctgcccggtatggcagtacc
atcgatactgactggtctatctcctttgagcagatcttggcttccatgctgacggaaact
gcccttgtaaactactttgagaaaaaagtcaacattctgcagaagatcaaagatcagaag
aagatggagaggcagttcagttcatccagtgactatgaactttcctctgtgtcagggtga
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