Cuculus canorus (common cuckoo): 104059947
Help
Entry
104059947 CDS
T08597
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00310
Lysine degradation
cuca00514
Other types of O-glycan biosynthesis
cuca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104059947 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
104059947 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cuca01003
]
104059947 (COLGALT1)
Enzymes [BR:
cuca01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
104059947 (COLGALT1)
Glycosyltransferases [BR:
cuca01003
]
O-Glycan biosynthesis
O-linked Gal type
104059947 (COLGALT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Glycos_transf_2
Anp1
Motif
Other DBs
NCBI-GeneID:
104059947
NCBI-ProteinID:
XP_053907778
LinkDB
All DBs
Position
30:1458131..1467939
Genome browser
AA seq
607 aa
AA seq
DB search
MAALLLSAAAAVWLSGPVLAYFPEERWSPESPLRPPRVMVALIARNAAHALPVTLGALER
LRHPPSRTALWVAVDHSEDNTTALLREWLMRVRGLYHRVEWRPMDEPRSYPDEEGPKHWS
PSRYEHVMRLRQAALEAARASWADYLLFLDADNVLTNPDTLALLMAENKTVVAPMLDSRA
AYSNFWCGMTAQGYYRRTPAYLPIRKRERRGCFAVPMVHSTFLLDLRKEASQALAFYPPH
PDYTWAFDDIIVFAFSCKQAGVQMFVSNREVFGFLPVPLRSHSSLRDEAESFLHVQLEIM
VTLPPAEPSPHVWVPPKVPDKMGFDEVFLINLRRRADRRARMLRSLREQEIAARLVEAVD
GGALNSSEVKALGIRMLPGYRDPYHGRPLTRGELGCFLSHYRVWQEIVARELQRSVVFED
DLRFEIFFKRRLMALVEDLAAAGVSWDLIYIGRKRMQVERPEKPVPRVRNVVEADYSYWT
LGYVLSLGGARKLLAAEPLAKMVPVDEFLPIMFNKHPVSDYARHFPWRSLRALSAEPLLV
FPTHYTGDEGYVSDTEASALWDAAEASALWDAAEPSPKMREQRELRREARNSGVLRSPLD
SAARDEL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctgctgagcgcggcggcggccgtgtggctgtcgggccccgttctcgcc
tatttccccgaggagcgctggagccccgaatcgccgctgcggccgccgcgggtgatggtg
gcgctgatcgcccgcaacgcggcccacgcgctgcccgtcaccctcggggccctcgagcgg
ctgcggcacccgccgagcaggaccgcgctgtgggtggcggtggatcacagcgaggacaac
acgacggcactgctgcgcgagtggctgatgcgcgtgcgtgggctctaccaccgcgtggaa
tggcgccccatggacgagccccggtcctaccccgacgaggagggccccaagcactggtcg
ccctcacgctacgagcacgtcatgcggctgcggcaggcggcgctggaggccgcgcgggcc
agctgggccgactacctgctgttcctggacgccgataacgtcttgaccaaccccgacacg
ctggcgctgctcatggccgagaacaagacggtggtggctcccatgctggactcgcgggcc
gcctactccaacttctggtgcgggatgacggcgcagggttactacaggcggacgccggcg
tacttacccatccggaagcgggagcgccgcggctgcttcgcggtgcccatggttcactcc
accttcctgctggacctgcggaaggaggcgtcgcaggcgctcgccttctacccccctcac
cccgactacacgtgggccttcgacgacatcatcgtctttgccttctcctgcaagcaggcg
ggcgtgcagatgttcgtctccaaccgggaggtctttgggttcctgccggtgccgctgcgc
tcccacagctctctgcgcgacgaggccgagagcttcctgcacgtccagctggagatcatg
gtgacgctgccgccggcggagccctcaccccacgtctgggtccccccgaaggtccccgac
aaaatgggcttcgacgaggttttcctgatcaacctgcggcgccgtgcggatcgccgggcg
cggatgctgcgctcgctgcgggagcaggagatcgccgctcgcctggtggaggccgtggac
ggcggggccttgaacagcagcgaggtgaaggccttgggaatccggatgctgccgggatac
cgggatccgtaccacgggcggccgctcacccgcggcgaactcggctgcttcctcagccac
taccgcgtctggcaggagatcgtggcgcgggagctgcagcgctcggtggtgtttgaggac
gatctgcgcttcgagatcttcttcaagcggcgcctgatggcgctggtggaggacctggcg
gcggccggcgtctcctgggacctcatttacatcgggaggaagcggatgcaggtggagcgg
ccggagaagccggtgccgcgggtgaggaacgtggtggaggccgattattcctattggacg
ctgggctacgtcctctcgctcggcggcgcccggaagctgctggcggcggagccgctcgcc
aagatggtgcccgtggacgagttcctgcccatcatgttcaacaaacacccggtttccgat
tacgcgcggcacttcccgtggcgctctctccgggcgctgtcggcggagccgctcttggtg
ttcccgacgcactacacgggggacgagggttacgtcagcgatacggaggcgtcggcgctg
tgggacgcggccgaagcgtcggcgctgtgggacgcggcggagccttcgcccaaaatgcgg
gagcagcgggagctgcggcgcgaggcgcgcaattccggggtgctccgatcgcccctcgac
agcgccgcgcgcgacgagctctga
DBGET
integrated database retrieval system
