Cuculus canorus (common cuckoo): 104059963
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Entry
104059963 CDS
T08597
Symbol
TRAPPC8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104059963 (TRAPPC8)
Membrane trafficking [BR:
cuca04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
104059963 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_4th
Ig_TPPC8_3rd
Ig_TPPC8_C
Ig_TPPC8_2nd
SNAP
Motif
Other DBs
NCBI-GeneID:
104059963
NCBI-ProteinID:
XP_053914725
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All DBs
Position
2:46475539..46530747
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AA seq
1472 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPLVAALCSEEAERVTRKNNLSFAELVKPFCRLTSEVHMRDPNN
QLHIIKNLKIAVNNIITYPPQPGAIRRLLNDVVSVSQPAEGLVANVITAGDYDLNISDRS
IKASVPWYSNWKETLMELNTSTFYSATTPWFESYRECFLQSMPASDHEFLNHYVACMLVV
SSSESEPVEQFLKLSQEQHRIQHSSEYLYPKWFIPNTLKYYVLLHDVSTGEEQRADSIYE
EMKQRYGTQGCYLLKINSRVSLRGTDEQIPDPWSQYLQKNTIQNQDCYEDGPYTVISNKN
TDHLISDGLDGEIKDGLSNNFKTHPLQLDHPSGSLDSTDYVKATASLQDSKKSNSGTPHG
ACLTLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSK
VPEKSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYHTAKKDFLNDQAML
YAAGALEMAAVSAFLQPGAPRPYPAHYMETAIQTYRDICKNMVLAERCVLLSAEILKSQS
KYSEAAALLIRLTSEDSDLRSALLLEQAAHCFINMKSPMVRKFAFHMILAGHRFSKAGQK
KHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQLDNAVSAFRHILINDSKQPPA
QQGAFLREYLYVYKNVTQLSPDGPLPQLPLPYINSSATRVFFGHDRRPAEGEKQAATHVS
LDQEYDSESSQQWKELEEQVVSAVNKGIIPSNFQPTQFCLNRYSDNSRFPLAVIEEPITV
EVSFRNPLKVPLLLTDLSLLWKFQPKDFSAKHDGETKELGTDDERMIGTEAIAEFLINSE
ETKVARLKLFPHQTGELHILGVVYNLGTVQGAVTLDGIDPSIGLQTGKFVSNGLSVRGRQ
DLEIQGPRLNNTKEEKTSIKYGPDRRLDPIITEEMPLLEVFFINFPTGLLCGEIRKAYVE
FVNVSKCPLTALKVVSKNPEFFTFGGNTAVLTPLSPSASENCSAYKTVVTDPTSVRTALL
SSASSADFGVGAGGQPEVIHVPLPDAVLLPGASVQLPMWLRGPDEEGVHEINFLFYYESI
KRHSKMCHRVLRHTAVICTSRSLHIRATVCRSNALDEEGRGDTMLVFVDLENINTSETGV
KEFHIVQVSSNSKHWKLQKSVNISGDKDTKLASRERAKLCFKAVRCKNSEENYTFADIVF
GNEQIISSASPCADFFFQSLSSEFKRTHMQSHTRASQRAVKQSFDETVRLIQRCSEVDLN
IVVLWKAYVVEDNKQLILEGQHHVALNTVGKEAFSFPQKQGFKKILGNSDWEDLEQELPE
MVLLKFFRSENAPVPARPMPEQLSNLIKTSLHYPESFNHSFHEKSLCLVPVTLLLSNCSQ
AVVDVMIDLRHKPTSSEALEIHGSFTWLGQTQYKLQLKSQEVYSLQLKACFVHTGVYNLG
TPRVFAKLADQVTLFETSQQNSMPALIIINNI
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtgcagtcggtgcaggagttcatccaggactcgttcgtgcccttggtg
gccgcgctgtgcagcgaggaggcggagagggtcacccgcaagaacaacctgagcttcgcc
gagctggtgaagcccttctgccgactcacctcggaagttcacatgagagatcctaataat
cagcttcacataattaaaaatttgaagattgctgtcaacaacattattacttatccacct
cagcctggagccattcgaaggcttctgaatgacgttgtgtctgtcagtcagcctgctgaa
ggacttgtcgctaatgtgatcacagctggagattatgaccttaacattagtgatcgctca
attaaagctagtgttccttggtacagtaattggaaagagacactgatggaactgaacaca
tccacgttttattcagctactactccttggtttgagtcttacagagagtgctttcttcag
tccatgcctgcatcagatcatgaattcttaaaccactatgttgcatgtatgcttgtagtt
tcgtctagtgaatcagagcctgtggagcaattcctgaagctgtctcaggaacaacatcga
attcagcatagcagtgaatacttatatcccaagtggtttataccaaacacgctcaaatac
tatgtgttactgcatgatgtaagcacaggagaagaacagagagctgactccatttatgaa
gagatgaagcagagatatggaactcagggttgctatttgctgaaaataaattctcgggtg
tctcttagaggaacagatgaacagataccagatccttggagtcagtatcttcagaaaaac
actatccagaaccaggattgctatgaagatggtccttatactgtcatttcaaacaagaac
accgatcacttgatatcagatggcttagatggtgaaattaaagatggcctgtcaaataac
tttaagactcacccccttcaactagatcatcccagtggcagtttggatagcactgattat
gtgaaggctactgcatcattgcaagactcaaagaagtcaaattctggaacgcctcatggt
gcttgtttaacactcacagatcacgatcgaatcagacagttcatacaggaattcacattt
aggggacttttgccacatattgagaagacaattcggcaacttaatgatcagttaatatcc
aggaaaggcttgagtcgatcactgttttctgctacaaaaaaatggtttagtggcagtaag
gttccagagaaaagtataaatgaactgaagaatacttctggtttgctgtatccaccagaa
gcaccagagcttcagatccggaaaatggcagacttgtgctttttggtgcaacactatgaa
cttgcatatagctgttaccatactgcaaagaaagacttcttaaatgatcaggcaatgctt
tatgcagctggagcactggaaatggcagcagtatcggcttttcttcagcctggagctcct
agaccatatcctgctcattatatggaaacagcaattcagacttaccgcgatatctgcaag
aacatggttctggctgaacgctgtgtgctgcttagtgctgaaatcttaaaaagtcaaagc
aaatattcagaggcggctgctcttctgattcgtttaaccagtgaggattcagatcttcgc
agtgcacttctgttggagcaggcagcccattgctttataaacatgaaaagtcccatggtt
agaaaatttgcatttcatatgatactggctggccatagatttagtaaagcaggccagaaa
aagcatgccttacgttgctactgtcaagccatgcaggtttacaaagggaaaggctggtct
cttgcagaagaccatatcaacttcactattggtcgccagtcctttacacttcgtcagctt
gacaatgctgtgtctgcctttaggcatattttgatcaatgatagtaaacaacctccagct
cagcaaggagcttttttaagagaatatctttatgtttataagaatgtaacccagctatca
cctgatggtcccttaccacagcttcctttaccatacattaacagctcagcaactcgtgtt
ttctttgggcatgatcgaagaccagcagaaggtgaaaagcaagcagccacacatgtaagt
ctggatcaggagtatgactctgaatcatcacaacagtggaaagaacttgaggagcaggtt
gtttctgcagtaaataaaggaataataccttcaaattttcaaccaacacagttctgttta
aatcgctactcagataactccagatttccacttgctgtgatagaagaaccaataactgtg
gaagtatcattccgaaacccgctgaaagttccccttcttttgactgacctttcattgctg
tggaagtttcaacctaaagacttcagtgcaaagcatgatggagaaactaaagaactggga
acagatgatgaacgtatgataggaactgaagcaatagcagaatttttaatcaatagcgag
gagacaaaagtggcaagactaaagctctttccccatcaaacaggggagctacatattctg
ggagtcgtttataatcttggcactgttcagggtgctgtgacattagatgggatagatcct
tctattggattacagacaggaaaatttgtctccaatgggttatctgtacggggacgacaa
gatttagaaatccaagggcctcgactcaataacacaaaagaggaaaaaacatctattaaa
tatggacccgatcgacgtttagatcccattattacagaggaaatgcctttgttggaggtg
ttcttcataaattttcctacagggcttctttgtggagaaatcagaaaagcatatgtagaa
tttgtgaacgtaagcaagtgtcctcttactgcactgaaggttgtgtccaaaaatccagaa
ttttttacttttggtggaaatactgctgttctaacgccgctaagtccttcagcttctgaa
aactgtagtgcatacaagactgttgtgacagatcctacctctgtgcgtacagcactacta
tcttcagcttcttctgcagactttggggttggcgcagggggtcagccagaagtaatacac
gtcccacttcctgatgctgttcttcttcctggggcttcagtgcagctgccaatgtggtta
cggggaccggatgaagaaggtgttcatgaaattaactttttgttttactatgaaagtatt
aaaaggcactcaaaaatgtgtcatagagtattaaggcacactgcagttatttgtactagc
cggtctctgcatattcgagctactgtctgcagaagtaatgcacttgatgaagaaggcaga
ggggacacgatgttggtgtttgtggatctagaaaatatcaataccagtgagactggtgtt
aaagaatttcatatagtacaagtttcaagtaatagcaagcactggaagcttcaaaagtct
gtcaacatctctggagacaaagatactaaacttgctagcagagagagagccaagttatgc
tttaaagcagtaagatgcaaaaactcagaagaaaattacacatttgcagacattgttttt
ggaaatgagcagataataagttcagccagtccttgtgcagactttttctttcaaagctta
tcctctgagtttaaaagaacgcatatgcaatctcatactcgtgcatctcaaagggctgtg
aaacaatcatttgatgagacagtcaggttgatacaaagatgcagtgaagtagacttgaac
attgttgtgctgtggaaggcatatgttgtggaagacaataagcagcttattttggagggc
cagcatcatgttgcccttaatacagttgggaaggaggctttttcatttcctcagaagcag
ggttttaaaaaaatactcgggaattctgattgggaggacttggaacaggaattaccagaa
atggttcttttgaagttttttcgatcagaaaatgcaccagtacctgcaagaccaatgcca
gagcagctttctaatcttatcaaaacaagtcttcattatccagagtctttcaatcattct
tttcatgaaaaaagcctctgtctggtacctgtcactctcctactttccaattgctcccag
gctgttgttgatgtgatgattgacttgcgacataaaccaacaagctcagaagcattagaa
atccatggatcttttacatggctggggcaaacacagtacaagcttcaacttaaaagccag
gaggtctatagcttgcagctgaaagcttgcttcgttcatacaggcgtctataatcttgga
acacccagagtatttgccaagcttgcggaccaagttactttgtttgaaacgagtcagcag
aactccatgcctgcactaattattatcaataatatctga
DBGET
integrated database retrieval system
