Cuculus canorus (common cuckoo): 104060003
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Entry
104060003 CDS
T08597
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cuca02000
]
104060003 (TMC3)
03037 Cilium and associated proteins [BR:
cuca03037
]
104060003 (TMC3)
Transporters [BR:
cuca02000
]
Other transporters
Pores ion channels [TC:
1
]
104060003 (TMC3)
Cilium and associated proteins [BR:
cuca03037
]
Other cilia and associated proteins
Stereociliary proteins
104060003 (TMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
104060003
NCBI-ProteinID:
XP_053933614
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All DBs
Position
12:7143803..7163868
Genome browser
AA seq
1117 aa
AA seq
DB search
MAAATGSAAARTAKSCKKYRTMKRHAGIYTYQEPPHSNSDDDISGEKAESHDPEQIFQNI
QHQKEIMSNIRCRPWPMRQKLRVLRQAKEIVLKYEGRLTRTRGYQAAGAELWRKFIRLAY
NFVVLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPELLAGAPF
GSTDSKTIPKERIGSAQDLDTIWSLGGYLQYSVLFYGYYGSNRKIGKAGYRLPLAYFLVG
MAVFAYSFIILLKKMAKNSRMSLASASDENYTFCWRLFCAWDYLIGNPEAAESKAAAIVN
SIREAILEEQEKKKSKNLAVTISLRIIANILVLLSLAGSIYIIYFVVDRSQKLERTKKEL
TLWEKNEVSVVVSLITMIAPSAFELVAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIAL
LDKVNSMSVADSNVNNNVSNSTNFLANKTLSKEDNLSTTIPDVQFKRNSIVTPEDSRNQG
STVSDSLVNKTASSNTQNSQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFFRGLCVRY
LSDCWCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLR
SWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIARYKPSLSCGPFSGQEK
IYDIVSETIKNDFPAWFNTVIAYISSPVVVLPALLLLFMLIYYLQSIARSLKFTNNQLRM
KIQTERTEDKKKVIQMAVARIQNLDGNDKKPEHEGDMISQESSVRSSTPRKNGSVLNFES
PVSKGTRIQTISQSVPQTVPSTDVARPVNATPTTPTSLTPALSVSNVQKPRNDRITNRYP
SVVHGSASELCKTKPYTPVTFKKHSEDVHSEPLFRKGIRQVNLDALGAEAPVFVGRRPYA
TRYIVVNENEPRKKSLRSTPRLQRHFRKDDSGDVIELYPRNIRRYVVRTPHQMYSPHPSE
DEEDEEELGREFINRSHRPRSLSDLRPAPRFYIGERAGGHILMSKDLARVHYKSWDDGFE
LDLDRPPYAYRKVHLNYPESRVKPKSKQKLEQSLTESDSISIESSSDPQNSSNDQYIQVI
HSKEKYPKSGTKLTKKKSKNSVDLNMSEPNELVCSNV
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcaacgggctctgctgctgcaagaactgccaagtcctgcaaaaagtatcga
acgatgaagcgtcatgctggcatctacacctaccaggagccaccgcacagcaactcggat
gatgatatcagtggagaaaaggctgagagccatgacccagagcagatctttcagaacatc
cagcaccagaaggagattatgtccaacatccgctgccgaccgtggccaatgaggcagaag
ctgcgggtgctcaggcaggcgaaggagatcgtgctgaagtatgaagggaggctcacgaga
acaagaggttaccaagccgctggtgcagagctttggaggaagtttattcgactggcatat
aattttgtggtactctttattccttgggaaatgagaataaagaaaattgagagtcatttt
gggtctggagttgcctcttacttcatcttcttgagatggctatttggaatcaatatcgtc
cttaccataatgacaggagcgtttgtagtcctaccagagctactggccggagcaccgttc
ggcagcacagacagcaagaccattcccaaggagcgtattggatccgctcaagacctggac
accatctggtcactagggggctacctccaatactctgttctgttttatggctactatggg
agcaacaggaagattgggaaagctggataccggctgcctcttgcctacttccttgtcgga
atggcagtgtttgcttacagcttcatcattctcttaaaaaaaatggcgaagaactcaaga
atgagtttagcaagtgcctctgatgaaaattacactttctgttggagactgttctgtgct
tgggactatttaataggaaacccggaggctgcggagagcaaagctgctgccatagttaac
agcatcagagaagctatactggaggagcaggaaaagaagaaaagcaaaaacttagcagtg
actatcagtttaagaattattgcaaacatccttgtgcttctctcacttgccggaagtatt
tacatcatatactttgtcgtggatcgatcccaaaagttagagcgcaccaagaaggaattg
actctttgggaaaaaaatgaggtaagcgtcgttgtgtcactgattacaatgattgcaccc
tctgcttttgaacttgtggcagctctggagatgtatcacccaaggaccactcttcgcttc
cagcttgccagggttcttgttctgtatctgggaaacctctacagtttaatcattgctctc
ctggataaagtgaacagcatgagtgtcgctgactctaatgttaacaacaatgtgagcaat
tctaccaacttcttagcaaacaaaaccctttctaaagaagacaatttatctacaaccatt
cctgatgtacaatttaagagaaacagcattgtcacaccagaagatagtcgtaatcaaggc
tcaacagtctctgactcgctggttaacaaaacagcttcttctaacacccagaactcacag
gatcagtgctgggagacgtatgttggtcaagagatgctaaagctttcaattatcgacatg
attttcacggtcgcaagcatcctgctaattgatttcttccgtggactgtgtgtccgatat
ttaagtgattgctggtgctgggatctagaaagcaagttccccgaatatggagaattcaaa
atcgcagagaacgtactgcatttggtgtacaaccaaggaatgatctggatgggagctttc
ttttcaccttgtttaccagcattcaatgtcctaaagttgattggactcatgtacctgagg
agctgggctgtgttaacatgcaatgtaccacatcagcaggttttcagagcatctcgatca
aataatttctacttggccatgttgctgttcatgctattcttatgcatgttgccaacaatc
tttgctattgccagatacaaaccatcgttaagctgtggtcctttcagtggacaagaaaaa
atatatgatattgtgtctgaaacaattaaaaacgattttcccgcatggttcaacacagtc
attgcttacatcagcagtcctgtggtggtcctccccgcactactacttttattcatgcta
atctattacctacaaagtattgcaagatcattaaaattcaccaacaatcaactgagaatg
aagatccaaacagaaagaactgaagataagaagaaagtcattcagatggcagtagccaga
atccaaaatctagatgggaatgacaagaaaccagagcacgaaggtgatatgatcagccag
gagtcttctgttcggtcctcaactccccgaaagaatggcagtgtattgaactttgaatct
cctgtgagcaaaggcaccagaatacaaactatttcccagtctgtgcctcaaactgtgccc
tcaactgatgttgcaagacctgtcaacgcaactcccacaactccaacctccttaacgcca
gctctctcagtatcaaatgttcagaaaccaagaaatgatcgtatcacaaacaggtaccca
agcgttgtgcatgggagtgcaagcgagctctgtaaaacaaagccctacacaccagtgact
ttcaaaaagcactctgaagatgttcattctgagcctctcttcagaaaaggcattcggcag
gtaaatctggatgcccttggggcagaggctcctgtttttgtgggacgtagaccatatgct
accaggtatattgttgttaatgaaaacgagccccgcaagaaatcactccgttctacccca
cgactccaaagacacttcagaaaggatgactcaggagacgttattgagttgtacccacgc
aatatcagaagatatgtggttcgaacaccacatcagatgtattcccctcaccccagtgaa
gatgaggaagatgaagaggaacttgggagagaattcataaacagatctcatcgccctcgc
tcactgtctgatcttcgcccagcaccacgattttacattggggaacgtgctggtggccac
attcttatgagcaaggatctagccagagtacattacaaatcctgggatgatggttttgag
ctagacctggacaggcctccatatgcttacaggaaagtgcacctgaactatcccgagtca
cgcgtgaaaccaaaatcaaagcaaaagctggaacaatctctaacagaatctgattccatt
tccattgaatccagcagtgatccgcagaacagcagcaatgaccagtatatccaggtcatt
cacagcaaggaaaagtatccaaaatctgggacaaaactcaccaaaaagaaatcaaaaaac
agtgttgatctaaatatgtctgagcctaatgaactggtgtgctcaaatgtctga
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