Cuculus canorus (common cuckoo): 104060008
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Entry
104060008 CDS
T08597
Symbol
IRF6
Name
(RefSeq) interferon regulatory factor 6 isoform X1
KO
K10154
interferon regulatory factor 6
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104060008 (IRF6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cuca04147
]
104060008 (IRF6)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
104060008 (IRF6)
Exosome [BR:
cuca04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104060008 (IRF6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
104060008
NCBI-ProteinID:
XP_053943495
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Position
24:complement(2238407..2247772)
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AA seq
499 aa
AA seq
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MALHPRRVRLKPWLVAQVDSGMYPGLIWLNREAKRFQIPWKHATRHSPQHEEENTIFKAW
AVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPIKIYEVCDIPQSQ
GSIINPENTQINFQYCAKPMKITLFLKCAAEFHTDQLPARMCLFAGSTGSAPWDEKDNDL
DDEEEEELNQSQHVPIQETFPFLNINDSPMAPASAENCSSEAVWPKNEPLDMEMPPTALQ
PDFFSSPELWISSLPMTDLEIKFEYRGKETGPTTTVSNPQGCRLFYGELGPMPDQEELFG
PISLEQVKFPGTEQITNERQKIFTSRLLDVMDRGLILEVSGHAIYAVRLCQCKVYWSGPC
APSSTTPNLIERQKKVKLFCLETFLSELIAHQKGQIEKQPPYEIYFCFGEEWPDGKPRER
KLIVVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAHLKQLYRLLQNHQ
EGWPMPAPAMHLAQPLPAQ
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgttacacccacgaagagttcgcttgaagccgtggctggtagcccaggtcgacagt
ggcatgtatcccggccttatctggctaaatcgagaagcgaagcggtttcagatcccctgg
aagcacgcaactcggcacagcccgcagcacgaggaggagaacaccatcttcaaggcttgg
gctgtggaaacaggaaagtaccaggaaggagtcgatgagccagaccccgcaaagtggaaa
gcccagctccgatgcgctcttaacaaaagccgggaattcaatttgatgtatgatggcacc
aaggaggtgcccatgaatccgattaaaatttatgaagtgtgcgatatcccgcagtcccag
ggatcaatcattaatccagaaaacacacaaataaacttccagtattgtgcaaagccaatg
aagatcacattatttttgaagtgcgctgcagagtttcacactgatcaactgcccgcaagg
atgtgcttgtttgcaggctccactggctcggctccgtgggatgaaaaagataatgatctt
gatgacgaagaggaggaagaactgaatcaatctcagcatgtccccattcaagagacgttt
ccatttctcaatatcaatgattctccaatggctccagccagcgcagaaaactgtagctcc
gaagctgtgtggccaaagaatgaacctctagatatggaaatgcccccaactgccttgcag
cctgacttcttcagcagcccggagctctggatcagctctctgccaatgacagacctggaa
atcaagtttgaatatcgaggaaaggagactggaccaacgacgactgtaagcaacccgcag
ggatgcagacttttctatggagagctgggtcctatgccagaccaggaagagctctttggg
cccattagtttggagcaagtaaagtttcctgggacagagcaaatcaccaatgaaaggcag
aagatctttacaagtcggctgctggatgttatggacaggggactgatcctggaggtcagt
ggccacgccatttacgctgtccggctctgccagtgcaaggtgtactggtctggtccctgt
gcgccttcctccaccacaccaaatttgatcgagagacaaaagaaagtcaaacttttctgt
ctggaaacattccttagtgagctgattgcccatcagaaaggacaaattgagaaacaacca
ccatatgagatctacttctgttttggagaagagtggcccgatgggaaacccagggagagg
aagctgattgtggttcaggtcatcccagtcgtggcccggatgatctacgaaatgttctcc
ggtgacttcacgcgctcctttgacagcggcagtgtgcggcttcagatctccacgcctgac
atcaaggacaacatcgtggctcacctgaagcagctgtaccgcctgctgcagaaccaccag
gaggggtggccaatgccggcccctgccatgcacttggctcagccgctcccagcccagtga
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