Cuculus canorus (common cuckoo): 104060042
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Entry
104060042 CDS
T08597
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104060042 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
104060042 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
104060042 (PDLIM1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
104060042
NCBI-ProteinID:
XP_053927064
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All DBs
Position
7:36065433..36111648
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AA seq
327 aa
AA seq
DB search
MGTHRIVLPGPGPWGFRLVGGRDFEQPLAISRVTPGSKAAIANLCIGDQIIAIDGVNTDN
MTHLEAQNKIKGCTDELTLTVSRTESKVWSPLVNEEGKTHPYKMNLASQPQEIRHVGSAH
NRSAVPFTAATASAPRLIAAQYNSPAGLYSSENIQTFNSAVESKTSPVALESTKPLDQHN
QPSGGIVIERESEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPIKPSGFRSVKA
PTTKVASSIGNAQKLPMCEKCGSGIVGVFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVE
DQIYCEKHARERVIPPEGYEVVTVFPK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggggacgcaccgtatcgtcttgccgggccccggaccctggggcttccgcctggtgggc
ggccgggacttcgagcagcccctcgccatctcccgggtgactccaggtagcaaagctgca
atagccaacttatgtataggagaccagatcatagccattgatggggtgaacacggataac
atgacacaccttgaggcgcaaaacaaaatcaagggttgcacagatgaactaactctgaca
gtcagcagaacagagtcaaaagtctggtcaccacttgtaaatgaggagggaaagacgcat
ccttataagatgaatctggcatctcagccacaggaaataaggcatgtaggaagtgcacac
aaccggagcgcggtgcccttcacagctgccacagcttctgcccctagactgatcgctgct
cagtacaacagcccagcaggcctctattcctcagagaacatccagaccttcaacagtgcg
gtggagtcaaagacatcacctgtggccctggagtctaccaagcctttagatcagcataac
cagccctcaggtggcattgtcatagagagagagtctgaggtttacaagatgctccaggag
aatcaagagtcaaacgagccacctagacaatctgcttccttcctcgtattgcaagagatt
ctggagtcagaagagaaaggtgaccctatcaaaccatctggatttaggagcgtcaaagcc
cccaccacaaaggtggcctcatcgattgggaatgcccagaagttgccgatgtgtgagaag
tgtggatctggcattgtaggggtgtttgtgaagatccgtgacaagcagcgtcacccagag
tgctatgtgtgcagcgactgtggcaccaacctcaagcagaaaggacacttcttcgtggaa
gaccaaatctactgcgagaagcatgcacgggagcgggtgattcccccagagggctacgag
gtggtcactgtcttcccaaagtaa
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