Cuculus canorus (common cuckoo): 104060110
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Entry
104060110 CDS
T08597
Symbol
TRIT1
Name
(RefSeq) tRNA dimethylallyltransferase isoform X1
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cuca01006
]
104060110 (TRIT1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuca03016
]
104060110 (TRIT1)
Enzymes [BR:
cuca01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
104060110 (TRIT1)
Prenyltransferases [BR:
cuca01006
]
Compound prenylation
tRNA dimethylallyltransferase
104060110 (TRIT1)
Transfer RNA biogenesis [BR:
cuca03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
104060110 (TRIT1)
Prokaryotic type
104060110 (TRIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
IPT
AAA_33
AAA_16
zf-C2H2_jaz
AAA_28
AAA_18
AAA_22
zf-met
Hpr_kinase_C
nSTAND3
AAA
Cytidylate_kin
Motif
Other DBs
NCBI-GeneID:
104060110
NCBI-ProteinID:
XP_053942569
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Position
22:complement(8858511..8873969)
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AA seq
475 aa
AA seq
DB search
MGRVRGRGGAEPRGGGGRRWEPPGRSRPAMAAALRRTPPPLVVILGATGTGKSALALQLG
RRLGGEIVSADAMQVYKGLDIITNKVSPQEQRLCRHHMISFVDPLVSNYTVVDFRDKAVA
LIEDIFARDKIPIVVGGTNYYIESLLWKVLIDTKEKAGKAPGSVTDRKVELEQLDSVQLH
RCLSQVDPEMAAKLHPHDKRKVARSLQVFEETGIPHSEILRQQQEEEGGGPLGGPLKYPH
SCILWLHADQAALDQRLEKRVDDMLAAGLLEELRDFHQRYNREKVAENRQDYQHGIFQSI
GFKEFHEYLISEGNCSPETSALLLEKGIQALKQVTKRYARRQNKWVRNRFLKRPGPNVPP
VYGLEVSDLLRWEEDVLKPALEIVESFIQGREPPAEPVRMEYDVNENKRSHRMCELCNRL
IIGDREWAAHTRSKSHLHHLKKRRKLEAASCAAETEWDSGDAGKTSGEESSLSLL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggtcagaggccggggtggggcagagccgcggggcggaggcgggcgccgctgg
gagcccccgggccggtcccgccccgccatggccgccgcgctccgccggacgccgccgccg
ctagtggtgatcctgggcgccaccggcaccgggaaatccgcgctggcgctgcagctcggg
cggcgcctcggcggggagatcgtcagcgccgatgccatgcaggtgtacaagggcttggac
atcatcacgaacaaggtttctccccaggagcagcgtctgtgcagacaccacatgatcagc
tttgtggatcccctggtctctaactacacagtggtggacttcagagacaaagctgtggct
ctgattgaagatatctttgcccgagacaagatcccaattgttgtgggaggaaccaactac
tatatcgagtccctgctctggaaggtccttattgacaccaaggagaaggctggtaaggct
cctggctcggtcactgacaggaaagtggagctggaacagctggacagtgtacagctccat
cgctgtctgagccaggtggacccagagatggcagccaagctacacccccatgacaagcgc
aaagtggccaggagcctccaagtgtttgaagagacagggatccctcacagtgaaatctta
cgccagcagcaggaggaagaaggtgggggacccctgggggggcccctgaagtacccacat
tcctgcatcctgtggctccatgcagaccaggcagctctggaccagcggctggagaagcgg
gtggatgacatgctggctgcaggactgctggaggagctgcgggacttccaccagcgctac
aaccgagagaaggtggctgagaaccggcaggattaccagcatggcatcttccagtccatt
ggcttcaaggagttccacgagtacctcatcagtgaggggaattgttcgcctgagaccagt
gccctgctgctggaaaaagggatccaggccctgaaacaagtgaccaagagatatgcccgg
aggcagaacaaatgggtccgaaaccgcttcctgaaacgtcctgggcccaacgtgcccccc
gtgtatggcttggaggtgtctgatctcttgcggtgggaggaggatgtgctgaagccagct
ctggaaattgtggagagcttcatccagggccgtgagcctccagcagagcctgtgaggatg
gaatatgatgtaaacgagaacaagcggagtcatcgtatgtgtgagctctgcaaccgactt
atcatcggggacagggagtgggcagctcacacaagatccaagtcccacctgcatcatctg
aagaagagaaggaagctggaggccgccagctgtgctgcagagaccgagtgggacagtggg
gatgcaggaaagacctcgggagaggagagcagcttgtctttgctgtag
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