Cuculus canorus (common cuckoo): 104060155
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Entry
104060155 CDS
T08597
Symbol
GTF2I
Name
(RefSeq) general transcription factor II-I
KO
K03121
transcription initiation factor TFII-I
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104060155 (GTF2I)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
104060155 (GTF2I)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104060155 (GTF2I)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104060155 (GTF2I)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
104060155 (GTF2I)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTF2I
Motif
Other DBs
NCBI-GeneID:
104060155
NCBI-ProteinID:
XP_053941377
LinkDB
All DBs
Position
20:8422067..8500424
Genome browser
AA seq
1146 aa
AA seq
DB search
MAQTTTPATSICDEDHSESRMVVTFLISALESMCKELAKSKAEVACIAVYETDVFVVGTE
RGRAFVNSRNDFQKDFLKYCVTEEERAAELQKTKPVAPANRLTVDMVELEALRKSVEDFF
CLSYGKALGKSTVVPVPYEKIQRDQSAVVVQGLPEGLEFKHPANYNVSTLEWILENKSGI
SFIIKRPFLEPKKHLGAHMTDPSHSIIPPGGSCPPIQVKTEPNEDSGISLEVTTVTVKKE
SDDPDYYQYNIPGPSEISEMDEKIALAKSYTDSSQHAPSETSEDPEVEVTIEDDDDYPPP
NKRSKSTDSANEAAGTGRRKVREFNFDKWNARITDLRQQVEELFEKKYAQAIKAQGPVSI
PYSLFQSHVEDFYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNLKRED
VPLDNLDAGDSSQHAPSETSEDPEVEVTIENDDDYPPPNKRSKSTDSANEAAGTGRRKVR
EFNFDKWNARITDLRQQVEELFEKKYAQAIKAQGPVSIPYPLFQSHVEDFYVEGLPEGIP
FRRPSTYGIPRLERILLAKERIRFVIKKHELLNLTREDVSLDKPDAGVKEEWYARIAKLR
KMVDQLFCKKFAEAMGSTEPKAVPYQKFEAHPAELYVEGLPENIPFRSPSWYGIPRLEKI
IQVGDRIKFVIKRPELLTITSTEVIQTKSNTPVKEDWNIRITKLRKQVEEIFNTKFAQAL
GLSEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRESGKIKFVVKRPE
LVTSYLPPGLASKINTNAMSSKSSKMSQSPAGNSSVPEIEVTVEEGPNKPPTTDVRTTSQ
TNGSNMGFKPRGREFSFEAWNAKITDLKQRVENLFNEKCGEALGLTEPVKVPFALFESFP
EVFYVEGLPEGVPFRRPSTFGIPRLEKILRNRAKIKFIIKKPEMFEAAVKENSARSPQRK
NNSSNVANTASTMTNTVVNTAAGVEDLNIIQVTIPDDESERLSKVEKARQLREQVNDLFS
WKFGEAIGMNFPVKVPYRKITINPGCVVVDGMPPGVMFKAPSYLEISSMRKILESAEFIK
FTVVRPFPGLVINNQLKEKAEAEAPPPAAAPALPEPADPSPIEVSVGDITETEESPKIKQ
EPDPTW
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggcccagactaccacaccagcaacatccatctgcgatgaggaccactctgaaagcaga
atggtggttacattcctcatatcagcgcttgaatcaatgtgtaaagaacttgccaagtcc
aaggcagaagttgcctgcattgctgtatatgaaacagatgtgtttgtggttggaactgag
agaggaagagcctttgtcaattctaggaatgatttccagaaggattttcttaaatactgt
gttacagaagaggagagggctgcagaactgcagaaaacaaagccagtagcacccgcaaac
aggctgacagtggatatggtggaacttgaagctctcaggaagtctgtggaggactttttc
tgcttatcctatggtaaagctttgggaaagtcaacggtggtacctgtgccatacgagaag
attcagagggaccagtctgctgtggtggtgcagggcctgcccgaagggctggagtttaag
cacccggcaaactacaacgtttcaaccctggaatggattttggaaaataagtcagggatc
tcatttatcatcaaaaggcctttcctagagccgaagaaacaccttggagctcatatgaca
gatccttcacattcaattatacctccaggtggaagttgccctcctattcaagtgaaaacc
gaaccaaacgaggattctggaatttctttggaagtgacaacagtaacggtgaagaaggaa
tcagatgatcctgactattatcagtataatattccaggcccttctgaaatatcggagatg
gatgaaaaaattgcccttgcaaaaagttacacagattcctcccagcatgccccttcagaa
acaagtgaggatcctgaggtcgaagtcaccatcgaagatgatgacgactacccaccccct
aacaaaagatcgaagagcaccgattcagccaatgaagctgccggtactgggagaagaaaa
gtgagagagttcaattttgacaaatggaatgcgcgaatcacagacttgagacagcaagtt
gaggagctgtttgaaaaaaaatacgctcaagcgataaaagcacaaggtccagtgtctatt
ccatactcactcttccagtcacatgtggaagatttctatgtggaaggattgccagaagga
attcccttcaggcggccatcaacatatggaattccccgtcttgagaggatacttctagca
aaggagcggattcgatttgtgattaaaaagcatgagcttttgaacttgaaacgagaagat
gtaccattggacaatctggatgcaggagattcctcccagcatgccccttcagaaacaagt
gaggatcctgaggtcgaagtcaccatcgaaaatgatgacgactacccaccccctaacaaa
agatcgaagagcaccgattcagccaatgaagctgccggtactgggagaagaaaagtgaga
gagttcaattttgacaaatggaatgcgcgaatcacagacttgagacagcaagttgaggag
ctgtttgaaaaaaaatacgctcaagctataaaagcacaaggtccagtgtctattccatac
ccactcttccagtcacatgtggaagatttctatgtggaaggattgccagaaggaattccc
ttcaggcggccatcgacatacggaattccccgtcttgagaggatacttctagcaaaggag
cgaattcgatttgtgattaaaaagcatgagcttttgaacttgacacgagaagatgtatca
ttggacaaaccggatgcaggagtgaaggaggagtggtatgccagaatcgccaaactaaga
aagatggtagatcagctcttctgtaaaaagtttgccgaggccatggggagcactgagcct
aaagctgttccataccagaaatttgaggcccatcctgcagagctctatgttgaagggctg
ccagagaacatccccttcaggagtccctcctggtacggaatccctcgcctggaaaaaata
attcaagtgggagacagaataaaatttgtcatcaaaaggccggagctgctaactatcacc
tcaactgaagttattcagaccaagtcaaacaccccagtcaaagaagattggaacattagg
atcacaaagctaagaaagcaagtggaagagatatttaatacaaagtttgcccaagctctg
gggctttcagaggcagtgaaagttccctatcccgtatttgaatcaaaccctgagttcttg
tacgtcgaaggcttgccagaaggaatccctttccggagtcctacctggtttggaattcca
cgccttgaaagaattgtccgtgagagtggcaaaatcaagtttgttgtcaagagacctgag
cttgtcacttcatacttgcctccaggactggctagtaaaataaacactaatgcaatgagc
tcaaagagttcaaaaatgtctcaaagtcctgcaggcaattcaagtgtcccagagattgaa
gttactgttgaagaaggtcctaataaaccaccaacaacggatgttcgaactacttctcaa
accaatgggtccaatatgggtttcaagccacgaggaagagagttttctttcgaagcgtgg
aatgccaaaattactgacttaaagcagcgagtcgaaaatctttttaatgaaaaatgtggg
gaagcgctggggctgactgaaccagtgaaggtgccatttgcattgtttgaatccttcccg
gaggttttctacgtggaagggcttcctgagggggtgccattccgccgaccttctactttt
ggaattccgagactagagaagatcctgagaaacagagctaagataaaattcattattaaa
aagcctgagatgtttgaggcagctgtgaaggaaaactctgctagaagcccccaaaggaaa
aataactcatctaatgtggccaatacagcaagcaccatgacaaacacagtggtgaacacg
gctgcaggggttgaagatcttaacatcattcaggtaaccataccagatgatgaaagtgag
cggctgtcaaaagtagagaaggccagacaattgagagagcaagtaaatgatctttttagc
tggaaatttggtgaagccattggcatgaattttcccgtgaaagtcccctacagaaaaatc
accatcaaccccggctgtgtggtggtggatgggatgcctcctggcgtgatgtttaaagct
cccagttacctggaaatcagctcgatgaggaagattttggaatcagcagagtttatcaaa
ttcactgttgttcgaccatttccaggacttgtgattaacaatcagctgaaggaaaaagcc
gaagcagaagcaccgccaccagcagcagcaccagcactgccagagccagctgacccaagc
ccaatagaagtgtctgtaggagatattacagaaacagaagaaagtcctaaaataaagcaa
gaaccagacccaacatggtag
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