Cuculus canorus (common cuckoo): 104060231
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Entry
104060231 CDS
T08597
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104060231 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104060231 (NIPBL)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
104060231 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
104060231
NCBI-ProteinID:
XP_053909691
LinkDB
All DBs
Position
Z:2946511..3099327
Genome browser
AA seq
2794 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLIHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAILARNPNVFREKSMQNRYGVQS
GMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTPHPQMQQASVSSPIVTAGMRNLHENKVSSQLSGNSANHHADNS
RHGSNEDYLQMVHRLSSDDGDPSMRNAASFSLRSPQSVCSPAGSDGTLKGSRQPLIQQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSNVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNAAQCL
PQHEQTAFLQAQQVPVLQQNTSIAAKQPQTPVVQTQQQVSQQGTITSYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQENKPQEAGGATGGNRAASQETSSTGNGARPA
LMVSIDLQQAGRADSQATVTQDLDTIKKPEEIKQYNDGFVCVPQEDTVGVLKFRPENHPE
IFRKKSDFEGQKMDIQQNENRQMEFQQNESRRLESKYNENKQLEARHESKHESRQMEVKQ
NENRQMESKQNETRQMEMKQNEGKQNNGKQEIRQRPETPKQKSEGRPETPKQKSEGRPET
PKQKSEGRPETPKHRHDNRRDASKPLSDKKIEISRHKLDVKPDLSRVKPESRSDPTKQRP
DGRSVSDTPRRDHDSLKQRSEDRGESERYRGDPSKIRRPEYLRSSNKNEHDSKHGIKSDG
SKPEKFERKHRHESGEPKERFSSLDQKSRPDSPRIKQESKGDASKSRPDKPGFKSPNSKD
ERRTDGNKSKIDSNKAHADNKAEFPSYLLGARSGALKHFVIPKIKRDKDGNVTQESRKTE
FRGEQKDKVEKIGLVEDLNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSCFKPNKNKSS
KSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDS
EEAFESSRKRHKKDRDEAWEYEEHDRRSSSDHRRSGHYHEGRRTSGSGRYRNRSPDDSDM
DDYSPPSSLSEVARKMKKKEKQRKRKAYEPKLTPEELMDSSSFKRFTASIENILENLEDM
DFTAFGDDDEIPQELLLGKHQLSELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDG
SKLSTLLNHNNDTEDEERLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERV
IQYTKFHLQNTLYPQYDPVYRVDPHGGGLLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSS
LSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEI
FTSLARLPTSKRSLRNFRLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSGEKDSNSDEE
SNKKVDQDVLITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKP
EWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSIAR
ILKQASGGEDEIQQLQKALLDYLDENTETDASLVFSRKFYIAQWFRDTTMETEKAIKSQK
DEDSSEGTHHAKDVETTGQIMHRAESRKKFLRSIIKTAPSQFSTLKMNSDTVDYEDACLI
VRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGV
HGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDIC
IEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNITDV
VAACRDTGYDWFEQLLQNLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDSKG
VNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVP
LMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGA
LSKLKSQHQEDPNSTILTANKPALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLEL
LMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKN
LQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSS
VRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMK
AVAGMKMSYQVQQAINTCPKDPVRGFRHDESSSALCSHLYSMIRGNRQHRRAFLISLLNL
FDDTAKTEVNMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDK
KKERKPSSEEETESDSNSGSGSESEEEASKPRRLRKRVDSDSDSDEENDINAVMKCLPED
PAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFH
PKQTLDFLRSDMANSKITEEVKRSIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKA
ITSLLGGGSPKNNAAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDV
IAICCPKYKDRPQIARVVQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESD
IIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8385 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtcttaca
gaccttttgaaccagctgcctcttccatcacctttacctgctacaacaacaaaaagcctg
cttttcaatggacggatagctgaagaggtgaactgccttctggcttgcagggatgaaaat
ctggtttcacagctcatccacagtctcaatcaggtgtcaacagatcacatagagttgaaa
gataaccttggcagcgatgatccagagggagatataccagtcttgctgcaggctatcctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatacggggtgcaaagc
gggatgatgatgtcacagtttaatatttctcagaattccatgcgtggtagtcctgcatct
tccaattatcaacaaaccactatctcacatagcccttccagccggtttgtgccaccacag
acaagctctggtaatagatttttggcacaacagaacagtccagtgcctagtccttatgct
cctcaaagccctgcaggatacatgccatattcacatcctccaagttatacaccacatcct
cagatgcagcaagcttcagtatccagtcccattgtcacagctgggatgaggaatctccat
gaaaataaggtttcaagtcagttatctggaaattcagctaatcatcatgctgataattct
agacatggctcaaatgaagactacctacagatggtccacagactaagtagtgatgatggt
gatccttcaatgaggaatgctgcatctttttccttgaggtcaccacagtcagtctgctct
ccagctggaagtgatggaacccttaaaggatcaagacaacctttaatccaacagtctcag
cctccaccttactcatcacctagagatgttcccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagttctccttccaaggactccactaagcttacatta
agactgtctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttg
gaaaacagcaatgtgtcagagggtgatattccttttaatgtgcagtacccaggacagact
tctaaaacacccgttactccacaggatgttaaccgcccactaaacgctgctcagtgtttg
ccgcagcacgaacagacagctttccttcaggcacaacaagtgcctgtattacaacagaac
acttcaattgctgcaaaacaacctcagacccctgtggtacagacacagcaacaggtttcg
caacaaggaactataacgtcatatgatgaagtagaattggatgcattggctgaaattgag
cggatagaacgtgaatcagctattgaaagggagcgattttcaaaagaagtgcaagataaa
gataagcctctgaagaagcgaaaacaagaaaacaaaccacaggaggctggaggtgctact
ggaggaaatagagcagcttctcaggagacaagttctacaggaaatggggcaaggccagcg
ttgatggttagcattgatctgcagcaagcaggaagagcagactctcaggcaacagtaact
caggatttggacaccatcaaaaaacctgaagaaattaagcagtataatgatgggtttgtg
tgtgttccccaagaagacactgttggagttcttaaatttagacctgaaaaccatcctgag
atttttaggaaaaagtcagactttgaaggtcaaaagatggacatccagcaaaatgaaaat
agacaaatggaatttcaacaaaatgagagcagacggttggaaagtaaatacaatgagaat
aaacagttagaagctagacatgaaagcaagcatgaaagcagacaaatggaagtgaaacag
aatgagaacagacagatggaatcaaaacaaaatgagaccaggcagatggagatgaaacaa
aatgagggaaaacaaaacaatggcaaacaggaaataaggcagaggcctgaaacgccaaaa
cagaagagtgaaggcaggcccgaaacaccaaaacagaagagtgaaggcaggcccgaaaca
ccgaaacagaagagtgaaggcaggcctgaaacgccaaaacacagacatgataataggaga
gatgccagtaaaccattgtcagataagaaaattgaaatatctaggcataaactagatgtg
aaacctgatctttcaagggtaaaacctgaaagtagatctgatccaactaaacagaggcct
gatgggcgttcggtttctgatacaccaaggcgtgaccatgatagccttaaacaaagatct
gaggacaggggggagtcagagaggtacagaggagatccatccaagattagaaggcctgaa
tatttgagatcatcaaacaaaaatgaacatgattctaagcatggtattaaatctgatggt
tcaaaacctgagaaatttgaaaggaaacataggcatgagtctggtgaaccaaaggaaagg
ttttcttctttggatcagaaatcaagacctgacagccctcgtattaaacaggaaagtaaa
ggggatgctagtaaatcaagacctgataaacctggttttaaatcacccaatagcaaggat
gaacgaaggacagatggtaataagagtaaaatagacagtaataaagcacatgctgacaat
aaagcagagtttcccagttatttgttgggggcaagatctggtgcattgaaacattttgtc
attccaaaaatcaagcgtgataaagatggcaatgttactcaggagtcaaggaaaaccgaa
tttagaggtgaacagaaggacaaagtagagaagatcggactagttgaagatctaaataaa
ggagctaagcctgtagttgtccttcaaaagctttctttggatgatgtgcagaaatttatt
aaggatagagaagataaatcaagggggtcttgttttaaacctaacaagaacaagtcatcc
aaatctaataaaggtagcatagatcagtcagtgttaaaggagttgcctcctgagctcctg
gcagaaattgagtccaccatgccactttgtgaacgcgtgaaaatgaacaagcgcaaacgt
agcacagttaatgagaaaccaaaatatgctgaaatcagttctgatgaagacaatgacagt
gaagaagcttttgaatcttctcgtaaaagacataaaaaggatagagatgaagcttgggag
tatgaagaacatgacagaagaagttctagtgaccacaggagaagtggtcattatcatgaa
ggaagaaggacttctggtagtggccgttaccgtaatcgcagtcctgatgactctgatatg
gatgattattctcctccctctagcctcagtgaggttgctagaaaaatgaagaaaaaagaa
aaacaaaggaagaggaaagcttatgaacctaaactaacacctgaagaattgatggattct
tcatctttcaaaaggtttactgcttcaatagagaatattttggaaaatttggaagacatg
gattttacagcttttggcgatgatgatgagattccacaggaattgctactgggaaaacat
cagcttagtgagttgggtagtgaatctgccaagatcaaggcaatgggcattatggacaag
ctctcaacagataaaacagtaaaagtcctgaatattttggaaaagaatattcaagatgga
tcaaagctttctacattacttaatcacaacaatgacactgaagatgaggagagattatgg
agagatcttatcatggaaagagtgacaaaatctgctgatgcttgtcttactgctatcaat
attatgacatcaccaaatatgcctaaagctgtatatattgaggacgtaatagaaagagtt
attcaatatacaaaatttcatttgcagaacactctctatcctcagtatgatcctgtatat
agagtggatcctcatggcggtggtcttttaagttcaaaagcaaaacgtgccaagtgttcc
acccacaagcaaagagttatagtgatgttgtataacaaagtttgtgacattgtcagtagc
ttgtcagagttgctagagatacagcttcttactgatacaactattcttcaggtatcttct
atgggaataacacctttctttgtagaaaatgtcagtgaactacagttatgtgccatcaaa
ttagtgactgcagtgttctccaggtatgaaaaacatagacagttaatactagaggaaatt
ttcacttcccttgcaagactaccaactagcaagaggagtctgagaaacttcagattgaac
agcagtgacactgatggagagcctatgtacattcagatggtaacggcactagttctgcag
cttattcagtgtgtcgtgcacttaccatcaggagaaaaagattctaactcagacgaggaa
tcaaacaaaaaggtggatcaagatgtgcttattactaactcttacgaaacagccatgaga
acagcacaaaacttcctttctattttccttaagaagtgtggcagtaaacaaggggaagaa
gattacaggccactatttgagaactttattcaagatcttctttccacagtcaataaacca
gaatggccagccgcagagttgctacttagcttattaggaaggctattggttcaccagttc
agtaacaaatctacagaaatggcattaagagttgcatcacttgactatcttggaactgta
gctgcacgactaaggaaagatgcagtcactagcaaaatggatcaaggatctatagccaga
atcctcaaacaggcttcaggaggagaagatgaaattcaacagctgcaaaaggctttgcta
gattatctggatgagaacacagaaactgatgcatcattagtgttttctcggaagttttat
atagcgcagtggttccgtgataccactatggagacagagaaagcaattaaatctcagaag
gatgaggattcgtctgaaggaactcatcatgcaaaagatgttgagaccacaggacaaatc
atgcatagagcagaaagtcgcaaaaagtttcttcgcagcatcattaaaactgctccatct
cagttcagtacattgaagatgaattctgatactgtggactacgaagatgcatgtttgatt
gttcgctacttggcctctatgaggccgtttgcccagagcttcgatatttatttgacacag
attctgcgtgtacttggtgaaaatgcaattgctgttcgaacaaaagccatgaagtgtttg
tctgaggttgttgctgtggaccccagtattctagccaggctggatatgcaacgaggtgtt
catggacgattaatggataactctactagtgtacgagaagcagctgtagagctccttggc
cgatttgtgctctgtcgtcctcagcttgctgagcagtattatgacatgctgattgaaaga
attttggatactggtatcagtgtcagaaagagagtcataaagatacttagggatatctgc
attgaacaaccaacatttccaaaaattacagagatgtgtgtgaaaatgattcggagagtc
aatgatgaagaaggcattaagaaattagtaaacgagaccttccagaagctctggtttact
ccaactccacaccatgacaaagaagcaatgacaaggaaaatactgaacatcactgatgtg
gttgcagcttgtagagatacagggtacgattggtttgaacagcttcttcaaaatctcttg
aagtcagaagaggatgcctcatataaacctgtgaagaaagcttgtactcaactagttgac
aatttggttgagcacattcttaaatacgaggaatctttatcagattctgacagcaaaggt
gtgaattctggtcgcttggttgcttgcataaccactttgttcttattcagcaaaatcagg
ccacagctaatggtcaaacatgccatgaccatgcagccatacctgaccactaagtgtagt
acccagaatgatttcatggtgatctgcaatgttgcaaaaatcttagagcttgtagtgccg
ctaatggagcacccaagtgagacatttcttgccactattgaggaagacctcatgaaactc
atcatcaaatacggcatgacagttgttcagcattgtgtgagctgtcttggggctgttgtg
aacaaggtcacccagaattacaaatttgtgtgggcctgttttaatagatactatggtgca
ctttcaaaattgaaaagtcaacaccaagaagaccccaatagtacaatacttactgccaat
aaaccagcactccttagatcacttttcactgttggagcactgtgccggcattttgatttt
gatcaggaagattttaagggcaacagtaaggttaacattaaggataaagtccttgaactg
ctgatgtattttacgaagcattcagatgaagaagtacagacaaaagccattattggcctt
ggatttgcgtttatacaacacccaagtttaatgtttgaacaggaagtgaagactctatac
aacagcattctttcagataagaactgttccgtaaacttaaaaatccaggtgttgaaaaac
ctccagacctacttgcaggaggaggatacacgtatgcagcaggcagacagagactggaaa
aaagtagcaaaacaggaagacctgaaagaaatgggtgatatttcctcagggatgagtagt
tccatcatgcagctgtatctcaaacaggtccttgaggctttctttcatacccagtccagt
gttcgccactttgctctaaatgtcattgcactgacattaaaccagggtctcatccatcct
gttcagtgtgtgccatacttaattgcaatgggcacagatccagagccctctatgcgaaat
aaagctgaccagcaactggtggaaatagacaaaaaatatgctgggttcattcacatgaaa
gcagtggctggtatgaagatgtcttaccaggtacaacaggccattaatacctgcccaaaa
gatcctgtgagaggttttagacatgatgagtcatccagtgcattgtgttcacatctgtac
tccatgatccgagggaaccgtcaacacagacgagcatttctaatttctttactcaacctc
tttgatgacactgcaaaaacagaggtgaatatgctgttgtacatagcagacaatctagcc
tgttttccttatcaaacacaggaagagccactgtttataatgcatcatatagacattaca
ctgtcagtttctggtagcaacttgttacagtcatttaaagagtctatggtgaaagataaa
aaaaaggaaagaaaaccttcatcagaggaggagacggagagtgacagtaacagtggtagt
gggagtgaaagtgaagaggaagcttctaagcctcggaggttacggaaacgagtggactct
gattcagattccgatgaagaaaatgatataaacgcagtgatgaaatgtttaccagaagat
ccagctcctttaattgaatttgcaaatgtctcccaaggcatattgttactgctgatgctg
aaacagcatttaaagaacctctgtggattctctgatagtaaaattcagaaatattctcca
tctgaatctgcaaaagtttatgataaagcgataaacaggaagacaggagtgcatttccat
ccaaaacaaactctggattttctgcggagtgatatggctaattccaagatcactgaagaa
gtgaagaggagtatagtaaaacagtacttagatttcaagctccttatggaacatttggat
cctgatgaagaggaagaagatggagaggtgtcagctagcacaaatgctcggaacaaagca
attacctcgctgcttggaggaggcagccctaaaaacaatgcagctgagacagaggacgat
gaaagtgatggggaggatagaggaggaggcacttcagggtcattgagaaggtcaaaacga
aattcagactctacggagttggcagcacagatgaatgaaagtgttgatgtcatggatgtc
atcgctatttgctgtccaaagtacaaagaccgaccacaaattgcaagagtagtacagaaa
accagcaatggcttcagtgttcagtggatggcaggctcctacagtggctcctggactgag
gctaagcgccgtgatggccgcaaactggtgccttgggtagacactattaaagagtcagac
attatttacaaaaaaattgctctaacgagtgctaataagctgactaataaagttgtgcag
actttacgatcgctgtatgccgccaaggatggaacttccagctaa
DBGET
integrated database retrieval system