Cuculus canorus (common cuckoo): 104060295
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Entry
104060295 CDS
T08597
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104060295 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cuca04515
]
104060295 (NFASC)
Cell adhesion molecules [BR:
cuca04515
]
Immunoglobulin superfamily
L1 family
104060295 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
Ig_VEGFR-1-like_5th
Ig_6
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
104060295
NCBI-ProteinID:
XP_053943398
LinkDB
All DBs
Position
24:525539..622467
Genome browser
AA seq
1367 aa
AA seq
DB search
MVMQRHHLTCAGIAFALYLHHLISAIEVPLDSNIQSELPQPPTITKQSVKDYIVDPRDNI
FIECEAKGNPIPIFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPEDYEGEYQCF
ARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPSPVIFWMSSS
MEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPH
NETSLRNHTDMYSARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYK
KGGELPAGKTKMENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDE
PQNLILAPGEDGRLVCRANGNPKPTIQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGS
SAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIRVIQNNRTRLDCPFFGSPIPTL
RWFKNGQGNTLDGGNYKAHENGSLEMNMARKEDQGIYTCVATNILGKAEAQVRLEVKDPT
RIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYMGNRMKKEDDGLTIYGV
AEKDQGDYTCVASTELDKDLAKAYLTVLAIPANRLRDLPKERPDRPRDLELTDLAERSVQ
LTWIPGDDNNSPITDYIVQFEEDRFQPGMWHNHSRYPGNVNSATLSLSPYVNYQFRVIAV
NEVGSSLPSVPSERYQTNGARPEFNPTGVQGAGTQKNNMEITWMPLNATQAYGPNLRYIV
RWRRRDIRGSWYNETVKTPRHVVWNTPIYVPYEIKVQAENDFGRAPEPDTVIGYSGEDYP
KAAPTDVRIRILNSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQYVS
FPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEIKEFPTPEGVPSSPRYLRIRQPNL
EIINLEWDHPEHPNGVLTGYNLRYQAFNGSKTGRTLVENFSPNQTKFTIQRTDPISRYRF
FLRARTQVGEGETLVEESPALLNEATPTPGTVPAGGAATELSPTTIGLTSTTTTPTTTTT
DTTTITTDITTTTTATTDITTTTTTTTTAATTIASTTAATERAPAATTKQELATNGSSIW
DIRAMANSNWANITWSHNYSAGTDFVVKYITSNNTEKSIPVKAQTPSSVQLANLTPGMMY
KLWVFPIWSSPSEHSYITFTTSSAYTKNQVDIATQGWFIGLMCAIALLVLILLIVCFIKR
SRGGKYPVRDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDGTIKQQESDDSLVD
YGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgcaaagacaccacctcacctgcgcgggaatagcatttgctctctaccttcat
cacctcattagcgccatcgaagtccctctggattcaaatattcagagtgaattgcctcag
ccccccacaatcaccaagcagtctgtgaaggactacatcgtcgacccaagggataacatc
ttcattgaatgtgaagccaaagggaaccccattcccattttttcctggacacggaacggg
aagttcttcaatgttgcgaaggaccccaaggtgtccatgcgacggcgatcaggaacgctg
gtcattgacttccacagtggggggcggccggaggactatgagggcgagtaccagtgcttc
gcccggaacgactacggcactgctctctccagcaaaatccacctccaagtgtctaagtct
cccctgtggcccaaggagaaggtggatgtgatagaggtggatgaaggcgctccactcagt
ctgcagtgcaacccaccgcctggcctgccctctcccgtcatcttctggatgagcagctcc
atggagcccatccaccaggacaagcgcgtctcccagggccagaacggtgacctgtacttc
tccaatgtcatgctgcaggatgctcagaccgactacagctgcaacgcgcgcttccacttc
acccacaccatccagcagaaaaacccctacaccctcaaggtgaaaaccaagaaaccccat
aacgaaacgtctttacgaaatcacactgacatgtacagtgcccgagggattacggaaact
actcccagcttcatgtatccctacgggacctcaagcagtcagatggtgctgagaggggtg
gacctcctgctggagtgcattgcttcaggagtaccagcaccagacatcatgtggtacaag
aaaggaggagagctcccagcaggcaaaaccaagatggaaaactttaacaaggcccttcgt
atctccaatgtctccgaggaagactctggggagtatttctgcttggcctcaaacaagatg
ggcagcatccgccacacgatctcggtgagagtgaaggctgctccatactggttggatgaa
ccccaaaacctcattctggctcccggtgaggacggcaggctggtctgtcgagccaacggg
aaccccaagcctacaatacagtggctggtgaacggcgagcctatcgaagcttctcctccc
aacccgagccgagaggtggctggagacaccattgtatttcgagatacgcagattggcagc
agtgctgtgtaccagtgcaatgcgtccaatgagcacggctaccttctcgccaatgccttt
gtcagcgtcctggacgtgcctccacggatactagccccccgcaaccagctcatcagggtc
attcaaaacaacaggacccgtctcgattgcccattttttggctcaccaatccctaccctg
agatggtttaagaacggccaagggaacactctggatggagggaactacaaggcacacgag
aacgggagcttggagatgaacatggctcggaaggaggaccagggcatctacacctgtgtt
gctaccaacatcctgggtaaagcagaggcccaggttcgcctggaggtcaaagacccaacc
aggattgtgagaggaccagaagatcaggtggtaaagagaggctccatgcctcgcctccac
tgccgtgtaaagcatgatcctacgctgaaactcacagtcacctggttgaaagatgatgca
cctctgtacatgggaaacaggatgaagaaagaagatgatggtctgacaatatacggcgtg
gctgaaaaggaccaaggggattacacttgcgtcgctagcacggagctggacaaggacctg
gccaaagcgtacctcaccgtactagccatccctgctaaccgtttgcgagacttacctaaa
gaacgacctgaccggccccgtgacttggagctgacagacctggccgagaggagcgtgcag
ctgacgtggattcctggtgatgacaataacagccccatcacagactacatcgtccagttt
gaggaggaccggttccaacctggcatgtggcataaccactccaggtaccccgggaacgtc
aactcggccaccctgagcctctctccttacgtcaactaccagtttcgggtgattgcggtg
aacgaagtgggcagcagcctgcccagcgtgccctccgaacgataccagaccaacggggca
cgtcctgaatttaacccgacaggagttcaaggtgcggggacccaaaaaaacaacatggag
ataacgtggatgcctctgaatgcaactcaagcttatggacccaacctcaggtacatcgtg
agatggaggcgaagggacatccgggggagctggtacaatgagacagtgaagacaccaagg
catgtcgtctggaacacacccatctacgtaccctacgagatcaaagtgcaggcagagaat
gactttggtagagcaccagagcctgacactgtcatcggctattcaggggaagattatccc
aaggctgcacctacggatgttaggataagaattttaaacagcactgccattgctctgacc
tggacccgagtgcacctggacaccatccagggacagctcaaggagtacagagcctatttc
tggagagacagtagtttgctgaagaacctgtgggtctccaaaaaacggcagtatgtgagt
tttcctggagaccgaaaccggggcatagtgtcccggctgtttccttacagcaactacaag
cttgagatggttgtaaccaacgggagaggagatgggccacgcagtgaaattaaggagttt
cccacaccagaaggagtgcccagttcccccaggtatttgagaatccggcagccaaatctg
gaaatcatcaatctggagtgggatcacccagagcatcccaatggagtcctcacaggatac
aaccttagatatcaagcctttaacggatccaaaacgggccgaaccctggtagagaacttc
tctcccaatcagacaaagttcaccatacagaggacagaccccatctcgcgctatcgcttc
ttcctgcgtgcacggacccaggtgggagaaggagaaaccctagtggaggagtcgccagcc
ttgctgaatgaagccactccaaccccaggtaccgtaccagctggaggagctgcaactgag
ttgtctccaactacaatcggtctaaccagtactacaacaaccccaactaccaccaccacc
gacacaactaccatcactaccgacataactaccacaactaccgccactaccgacataact
accaccaccacaactaccaccacagctgccaccaccatcgcaagcactacagcagctaca
gagagggctccggcagccaccacaaagcaggagttggccaccaatggatcgtccatatgg
gacataagagctatggctaatagtaactgggcaaacatcacctggagccacaattactct
gcaggaactgactttgtggttaagtatatcaccagtaacaacacagagaaatctatccct
gttaaagctcagaccccttcctctgtgcagctggcgaatctgacgccgggaatgatgtac
aagctgtgggtgttccccatatggtctagccccagcgaacactcgtacataacctttacc
accagctcagcttataccaagaatcaagtggacatcgcaacgcaaggctggttcatcggg
ctgatgtgtgccatagctctcctagtccttattctgttgatcgtctgcttcattaagagg
agcagaggtgggaaatacccagtacgagacaataaagatgagcatctaaatcccgaagac
aagaacgttgaagatgggtcattcgactacagcgatgaggacaacaaacccctgccaaac
agccagacctccttggacggcacgataaagcagcaggagagtgatgatagcttggtggac
tatggagaggggggcgaagggcagtttaacgaggacggctcctttatcggccagtacacg
gtgaagaaggacaaagaggagaccgaaggcaatgagagctcagaagccacctccccagtc
aatgctatctactcgttggcataa
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