Cuculus canorus (common cuckoo): 104060303
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Entry
104060303 CDS
T08597
Symbol
PAX6
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104060303 (PAX6)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
104060303 (PAX6)
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
104060303
NCBI-ProteinID:
XP_053922836
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All DBs
Position
5:complement(32709379..32734177)
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AA seq
436 aa
AA seq
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MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQ
NVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRL
LSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGTWGTRPGWYPGT
SVPGQPAQDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALE
KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP
ISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTNTYSALPPMPSFTMANNLPMQPP
VPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTTSTGLISPGVSVPVQ
VPGSEPDMSQYWPRLQ
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacagtcacagcggcgtgaaccagctcggcggggtgttcgtcaacgggaggccg
ctgcccgactccacgcggcagaagatcgtggaactcgctcacagcggcgcccggccctgc
gacatctcccggatcctgcagacccatgcagatgcaaaagtccaagtgctggacaatcaa
aacgtgtcgaatggatgtgtgagtaaaattttgggcaggtattacgaaactggctccatc
agacccagggcaatcggaggtagtaaaccgagagtagcgactccagaagttgtaagcaaa
atagcacagtataaacgagagtgcccctccatctttgcgtgggagattcgagacagatta
ctatcagagggggtctgtaccaacgataatatacccagtgtgtcgtcgataaacagagtc
ctacgcaacctggctagcgaaaagcaacagatgggtgccgatgggatgtacgacaagcta
aggatgctcaacgggcagacagggacgtggggcacccggcccggctggtaccccggcacc
tcggtacccgggcaacccgcgcaagatggctgtccgcaacaggagggaggaggggagaac
actaactccatcagctctaatggagaagattcagacgaggcccaaatgagactccagttg
aaaagaaagctgcagagaaataggacatcctttacccaagagcaaatcgaagcccttgag
aaagaatttgagaggacccactatcccgatgtgtttgcaagagaaagactagctgctaaa
atagacctgcctgaagcaaggatacaggtgtggttttctaacagaagggccaagtggaga
agggaagagaagctgaggaaccagcgaagacaagccagcaacactcccagccacattccc
atcagcagtagtttcagcacaagcgtttaccagccgatcccacaaccgaccacccccgtt
tcctctttcacatcaggttccatgttgggcagaacggacacggcgctcacaaacacgtac
agcgcactgccgcccatgcctagcttcaccatggccaacaacctgcctatgcaacccccg
gtacccagccagacctcctcctactcttgcatgctgcccaccagtccatcggtgaatgga
cggagctatgatacatacacccctcctcacatgcagacacacatgaacagccagccgatg
ggcacctctggcaccacttccacaggtctcatttcccctggagtgtcagttccagttcaa
gttcctggcagtgaacctgatatgtctcaatactggccaagattacagtaa
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