Cuculus canorus (common cuckoo): 104060325
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Entry
104060325 CDS
T08597
Symbol
RNF43
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104060325 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104060325 (RNF43)
Enzymes [BR:
cuca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104060325 (RNF43)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104060325 (RNF43)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
KIAA1549
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
104060325
NCBI-ProteinID:
XP_009560401
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All DBs
Position
20:complement(12187105..12243085)
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AA seq
829 aa
AA seq
DB search
MSAGPLRQPALLWPWLLMATLQAGLGQPRLALAAVGEPERAAAQKAIIRVIPLKVEPIVL
EGEFANVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVIIILIFFIRTKCHLNRTQDSLQQQTMQAIGQLATR
TYQARSRQASRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILARDSVDQATSAGSRLAPQDMEPGRRLHLFRQHPGHALYHLPHAYPQRNLRS
FPPEPAQGNPFFCSPELSQLDFGTIHYVPYRPAASLPACSHSSPLAQSLLGQQHPNPLVC
GQTLPPHRTCSLQPQPPCPGFTAALVQKQHRVPAQRRGGIHGHQHNSSGSGESYLTEHSG
YLADGPGSDSSSGPCHGSSSDSMLNCTDISLQGIHGSCSTFRSSLSSDYDPFVYCSSEGP
ATDNGQKQPRPLRETRPRSLDLVVPGGAAPAKPQVLSHIHYHHHQHHHYRGDTDCLPGRA
GQRKSRSSGAKVGFHSARTQKRTQKSPPRQQSLESRAGLQEAALAGQAACTQQGWEPPRA
PSAASNRLDFSVDATRQSGAAGTSAVPLPLRYSFQSRHHRRKRKCPLDPDPAPLPENSAL
PKSCDAHIPPSHPAGHCCSPEVQPLIPSTPLPCGSGSQPLWKCLVPQSSSQLKKQEEGLL
GQEGNRMASADFSGTGAPRHSVSLHPHHPSQQGRQGSEEEVQDVHEHSV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctggccccctgcggcagccggctctcctctggccttggctgctgatggcgacg
ctgcaggcaggactgggccagccaaggctagcgctggcggctgtgggcgagccagagcgg
gcggcagcgcagaaagccatcattagggtgatccccctgaaagttgagccaatcgtcctg
gaaggggagtttgcaaacgtcgctgaggtgactccagctgagggaaaactgctccagtcc
cacccgctgtccctgtgcaacaccagcgaggatgaacacaccgagtccgggttcatcacc
atcgtcaagctcgaacagccagatcgggatcccaacccctgcctgtcactggccaacaag
gcaaagctggcaggggagcgtggagctcgtgcgatcctttttgacatcaccgatgatgaa
agcgctgctgatcagctgcgaaagcccagaggtctgagtcagcccgtggttctgatcagg
ggccatgatgctgagcttctcatgggtgtcgtgaacaaaaacagagaggcccacgtgaag
atagaggtcaaggagccaccagcttggccagactatgacgtgtggatccttctcacggtg
gtcagcactgtggtcatcatcattttgatatttttcatccgcacaaagtgccatctgaac
aggactcaggactccctgcagcagcagaccatgcaggctatcgggcagctggccacgcgc
acataccaggcaaggagccggcaggcatcgcgctgggactcggccagcagctgcagctca
gccccggtctgtgccatttgcctggaggagttcagtgagggccaggaactgcggatcatc
tcgtgctcccatgaatttcaccgggagtgtgtggacccctggctgcagcaacaccacacg
tgtccactttgcatgttcaatatccttgccagagactcggtggaccaggccacgtctgct
ggctccaggctggcccctcaggacatggagcctggacgacggctccaccttttccgccag
cacccaggacatgccctttaccacctcccacatgcatatcctcagaggaacctcaggagc
ttccccccggagccagcccaaggcaaccctttcttctgctctccagagctctcccagctg
gattttggcaccatccactatgtgccctacaggccagccgcctctctgcctgcctgcagc
cactcatcacccctggcccagagtttgctgggtcagcagcatcccaaccccctggtgtgt
gggcagacgctgccgccccacaggacttgctctctccagccccagcccccctgcccaggg
ttcacggcagccctggtgcagaagcagcaccgtgtacccgcccagcgccggggcggcatc
cacgggcaccagcacaacagcagcggctccggagagagctatctcaccgagcacagcggg
tacctggcagacgggccaggcagtgactccagctcggggccttgtcatggttcctccagt
gactctatgttgaactgcacggatatcagcctgcagggcatccacggcagctgctccacc
ttccgcagctccctcagcagtgactatgacccctttgtgtactgcagctctgagggacct
gccacagacaacggccagaagcagccgcggccactgagggagacacgacccaggtccttg
gacctggtggtgcctgggggtgccgctccagccaagccccaggtgctcagccacatccac
taccaccaccaccagcaccatcactacagaggagacacagactgtctgcctgggcgggct
gggcagcgcaaatcccgctcctctggggccaaggttggcttccacagtgctcggacacaa
aagagaactcagaaaagccctccccgccagcagtctttggaaagcagagctgggctacag
gaggcagctctggcagggcaggcagcctgtactcagcaaggctgggagccccctcgtgcc
ccctctgctgcttcaaacaggttggactttagtgtagatgccaccagacaatcaggagca
gcaggcacatctgctgtcccgctgcccttgagatacagcttccagagccgtcatcaccga
aggaaaagaaagtgtcccctagatcccgaccctgctcccctgcccgagaactcagccttg
cccaaatcctgtgacgctcacattcctcccagccaccctgctggccactgctgctcacct
gaagttcagcccctgatcccaagcactcccctgccctgcggctcaggctctcagccgctc
tggaagtgtttagtgccgcaatccagctcacagctgaaaaagcaagaggaggggttgtta
ggacaagagggaaaccgcatggcttctgctgatttctcagggacgggcgctcccagacac
agtgtgagtcttcaccctcaccacccatcgcagcagggcaggcaggggtctgaagaggag
gtccaggatgtccatgaacactcagtttaa
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