Cuculus canorus (common cuckoo): 104060371
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Entry
104060371 CDS
T08597
Symbol
TCERG1
Name
(RefSeq) transcription elongation regulator 1
KO
K12824
transcription elongation regulator 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104060371 (TCERG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
104060371 (TCERG1)
Spliceosome [BR:
cuca03041
]
Complex A
U1 snRNP components
U1 related factors
104060371 (TCERG1)
Complex B
104060371 (TCERG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
104060371
NCBI-ProteinID:
XP_009560460
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MAQQQALRFRGPAPPPNAVMRGPPPLLRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMP
PPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGXXXXXXXXXVSSPGTPAMPPAEEIWVEN
KTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAQAQAVGASTPTTSSPAS
AASPSTSSSTQSSTTSTTTTATSVSQTISTPTTQDQTPSSGVSVATPSVSVSTSAPSATP
VQTVPQAVPQTLPPAVPHAVPQPTAAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSC
PYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGATTVSEWTEYKTADGKTYYY
NNRTLESTWEKPQELKEKEKMEEKIKEPIKEPTEEPLPMETEEEEPKEEPIKELIKEEPK
EEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRAD
VDKIIQEPPHKKGMEEGKKLIREEHESTEDANEDEPIKIKKRKKDDNKDIDSEKEAAMEA
EIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVF
DQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKM
KDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPR
YKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKE
IDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLF
NEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEE
YIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEE
RRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagcaggcactgcggttccgcggccctgctcccccaccgaacgcggtaatg
aggggcccaccgcctctcctgcgaccacctccacccttcggcatgatgcgagggccccct
ccaccgcctcggcccccttttgggcgcccgccctttgatccaaacatgcctcccatgcca
cctccaggagggattcctccaccaatgggacctccacatttacagagaccaccatttatg
cctcctcccatgggaagcatgccaccaccgcctggnnnnnnnnnnnnnnnnnnnnnnnnn
nctgtaagttcccctgggacaccagcaatgcccccagctgaagagatatgggtagaaaac
aaaactccagatggcaaggtctatttctataacgcacgcacacgcgagtcagcatggacc
aagccggacggggtcaaagtgattcagcagtcggagctgacaccaatgctggcagcacag
gcgcaggcccaggcgcaagcagtaggtgcctccacccctaccaccagcagccctgcgtct
gcagcctctccatccacctcctcaagcacccagtcctccacaacctctaccacaaccaca
gccacttcagtttcacagacgatttccacacctaccacccaagaccagaccccgagttcg
ggtgtttcagttgccacaccatcagtcagtgtttcaacctctgctccttctgctacacct
gtgcagactgtaccccaggcagtcccacagacattgcctcctgcagttcctcatgcagta
cctcaaccaactgcagcaattcctgcttttccaccagtaatggtacctccatttcgtgtc
ccccttcctggcatgcctattccacttccaggtgtagcaatgatgcaaatagtcagctgc
ccgtatgtaaagacagtcgctaccaccaagaccggagttctgccaggcatggcccctccc
attgttcccatgatccatccccaggttgccattgccgcttcgcctgccacgctggccgga
gcaacaactgtctctgaatggacagagtacaaaacagcagatggaaagacttactattat
aacaaccggaccttggagtcaacatgggaaaaaccccaagaattgaaagaaaaagaaaaa
atggaagagaagattaaagagccaattaaagaacctacggaggagcctttaccaatggag
acagaagaggaagagccaaaagaagaacctataaaagaacttataaaggaggagccaaaa
gaggaagaaatgactgaagaagagaaagcagctcagaaggccaagccagttgcaaccact
cctatcccaggaaccccatggtgcgtggtgtggactggtgatgagcgcgttttcttctat
aaccctaccacacgtctttccatgtgggaccgaccagatgacctgattgggagagctgac
gtggacaaaattattcaagaaccacctcacaaaaagggaatggaagaaggaaaaaaactt
attagagaagagcatgaatctactgaggatgcaaatgaagatgagcctattaaaattaaa
aagcgcaagaaagatgataacaaagatattgattcagagaaggaggctgctatggaagct
gaaattaaagccgctcgagagagagccattgtccctctggaggctcggatgaaacaattc
aaggacatgcttctagaaagaggggtctctgctttttcaacgtgggagaaggagctacac
aagatagtttttgatcctcggtacttacttctcaacccaaaagaaagaaaacaggtattt
gatcagtacgtgaaaacccgagcagaagaagagcgcaaggagaagaaaaacaaaataatg
caggccaaggaggatttcaagaaaatgatggaagaagcaaagattaacccaagaactact
tttagtgaatttgcagccaagcatgctaaagactcgagattcaaggcaattgaaaagatg
aaagatcgagaggccttgtttaatgagtttatcacagcggcaagaaagaaggaaaaagaa
gattcgaagaccagaggcgagaagatcaaaatggacttctttgaactgctggcaaatcac
cacctggacagtcagtctcgctggagcaaagtgaaggacaaagtagagactgacccacgt
tacaaagcagtggatagctcttcgcagagggaggacctgttcaagcagtacatagagaaa
atagctaagaatttagattctgagaaagaaaaggagctggagagacaagcacgcattgag
gcgagtttgcgtgaacgagaaagggaagtccagaaagctcgttcggagcagaccaaggaa
attgatagagaacgtgagcagcacaaacgggaggaagctatccagaacttcaaagcgctt
ctgtctgacatggtgcgttcttcagatgtgtcgtggtctgataccagaaggactctacgc
aaagatcatcgatgggagtctggctccttgctggaaagagaagagaaagagaagctgttt
aatgaacacattgaagcacttaccaaaaagaagagggaacacttcaggcaactcctggat
gaaacttcagcaataactttaacatcaacatggaaagaagtaaaaaaaatcattaaagaa
gatccaaggtgcattaaattttcttcaagtgacaggaaaaagcaaagggagtttgaggaa
tacattagagacaagtacatcactgccaaagccgacttccgaacgctattgaaagagacc
aaattcataacgtacagatccaaaaagttgatccaggagtcagatcagcatctgaaggat
gttgagaagatactacagaatgacaagcgatacctggtacttgactgtgtgccagaagag
agacgcaagctcatcgtgtcctacgtagacgacctggaccgtcgagggccgcccccaccc
cccacagcttcggagccgaccagacgaacaacaaaatag
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