Cuculus canorus (common cuckoo): 104060424
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Entry
104060424 CDS
T08597
Symbol
NR3C1
Name
(RefSeq) glucocorticoid receptor
KO
K05771
glucocorticoid receptor
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104060424 (NR3C1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104060424 (NR3C1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cuca03310
]
104060424 (NR3C1)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
104060424 (NR3C1)
Nuclear receptors [BR:
cuca03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
104060424 (NR3C1)
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Paralog
GFIT
Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
104060424
NCBI-ProteinID:
XP_053935723
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Position
14:complement(19739021..19797961)
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AA seq
773 aa
AA seq
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MDSKELLNSSDQDETRKNALISTKGGIVMDFHQPFRGGATVPAPVSTSPLPASSQSDSNQ
QPALADFSKGLVNNVPQPDLSKAVSLSMGLYMGETDAKVMGNDLGFSQQGQISVSSGETD
FRLLEESIASLNKSSSLAEDAKGAISSEVPLEPDFPGMAGRNVPLESGTAVQNQVGSNGG
NLKLFSEDQSTLDILQDLELPPVSPGKEPNGSPWRLDPLLDDGGLLSPISADDAFLLEGN
LGEDCKPPVLSDTKPKINDRGDLLSSSKMPMPQVKTEKEDFIELCTPGIKQENMGPIYCQ
ANFSGSNLLGTKVSAISIHGVSTSGGQMYHYDLNTPSLSQQQDQKPIFNIIPSLPASSEN
WNRCQGSGDETLAPLGTLSLSGRPAFSNGYSSPGMRSDVSSSPSTTSATTGPPPKLCLVC
SDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQA
GMNLEARKTKKKIKGIQQTGITGTRDVSETPGNKSIVPASLPQLTPTLVSLLEVIEPEVM
YSGYDSSLPDSSWRILSTLNMLGGRQVVAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLM
AFALGWRSYKQSNGNLLCFAPDLIINEQRMNLPCMYEQCKHMLMVARELSRLQVSYEEYL
CMKTLLLLSTVPKEGLKSQSLFEEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDS
MHDVVENLLSFCFQTFLDKSMSIEFPEMLAEIISNQIPKYSNGNIKKLLFHQK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggattccaaagaattgcttaactcgtcggatcaagacgaaacaaggaaaaatgcgctc
atcagtaccaaaggagggattgtgatggacttccatcaacccttcaggggtggagctact
gtaccagcccctgtgtctacatctcctctccctgcgtcttctcagtcagattccaatcag
caacctgctttggctgacttttcaaaaggattagtaaacaatgtgcctcagccagacctt
tccaaggcagtgtcactctcaatgggactatacatgggtgaaacggatgcaaaagtgatg
ggaaatgaccttggattttcacagcagggccaaatcagtgtctcttctggagaaacggac
ttcaggctcctggaagaaagtattgcaagcttgaacaagtcctcgagcctggctgaggac
gcaaagggagcaatatcttctgaggtgccgcttgagccggatttcccaggcatggctggc
cgcaatgtccctttagagtcaggaactgcagtccaaaatcaggttggctcaaatggtggc
aacttgaaattattctctgaagaccaaagcaccctggatattctccaggatttagaattg
ccaccagtatcacctggcaaagagcccaacgggagcccgtggaggcttgacccgttgcta
gatgatggtggcttgctgtcccctatatctgcagatgatgcatttctcctggaaggaaat
cttggtgaagactgcaagcctcctgttttatctgacactaagcctaaaattaatgaccgt
ggtgaccttttatcaagttccaaaatgccgatgcctcaagtgaaaacagaaaaggaagac
ttcattgaactctgtactcctggcataaagcaggaaaacatgggcccaatttattgccag
gcaaacttctctgggtctaacctgctgggtactaaagtctctgccatatcgatccatggt
gtcagcacctctgggggacagatgtatcactatgatctgaatactccatcgctctctcag
cagcaggatcagaaaccaatttttaatatcattccatctcttcctgccagttcagaaaat
tggaataggtgccagggatcgggagatgagacgttggctcctttgggaacgctcagcctt
tctggcagacctgctttctctaatggctactcaagccctggaatgagatcagatgtaagc
tcttctccatccacaacctcagcgactacgggaccacctcccaagctctgtcttgtctgc
tccgatgaggcctcgggctgtcattatggtgttctgacctgtggcagctgcaaggtgttc
ttcaagagagccgtagaagggcaacacaactatctatgcgctgggagaaacgactgtatt
attgacaaaatccggaggaaaaactgtcccgcgtgccgctaccggaaatgtcttcaggct
ggcatgaacctcgaagctcgaaaaacaaagaagaagatcaaaggcatccagcagactggc
ataacaggaacgcgggatgtctcggagacgcctggtaacaagagcatcgttcctgcctcc
ctgccgcagctgacccccactctggtgtccctgctggaggtgatcgagccagaggtgatg
tactcgggctacgacagctcgctgccggactccagctggcgcatcctctccaccctcaac
atgctgggcggtcggcaagtggtggctgcagtgaagtgggcaaaggcaataccaggtttc
cgaaacttgcatctggatgaccaaatgaccctcctgcaatactcgtggatgttcctaatg
gcttttgctttgggatggagatcatacaaacaatcaaatggaaacctgctgtgctttgca
ccagatctgattattaatgagcagagaatgaatttaccatgtatgtatgaacagtgcaaa
catatgcttatggttgcccgagagctctcacggctccaagtctcctatgaagagtatctc
tgcatgaaaaccttgcttctcctctctacagttcctaaggaaggcctgaagagtcagtct
ctgtttgaagagatccggatgacgtacattaaagagctggggaaggccatcgtgaagaga
gaagggaactcaagccagaactggcagcgattttatcaactgactaaactgctggactct
atgcatgatgtggttgaaaatcttctgagcttttgcttccagacatttttggataaatcc
atgagtattgagttcccagaaatgttggcagaaatcatcagcaatcagataccaaaatat
tcaaacggaaatatcaagaagctcttatttcatcagaagtga
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