Cuculus canorus (common cuckoo): 104060436
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Entry
104060436 CDS
T08597
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
104060436 (TMC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cuca02000
]
104060436 (TMC1)
03037 Cilium and associated proteins [BR:
cuca03037
]
104060436 (TMC1)
Transporters [BR:
cuca02000
]
Other transporters
Pores ion channels [TC:
1
]
104060436 (TMC1)
Cilium and associated proteins [BR:
cuca03037
]
Other cilia and associated proteins
Stereociliary proteins
104060436 (TMC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Piezo_TM1-24
COX16
Na_K-ATPase
Motif
Other DBs
NCBI-GeneID:
104060436
NCBI-ProteinID:
XP_053909988
LinkDB
All DBs
Position
Z:complement(27135164..>27255214)
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AA seq
966 aa
AA seq
DB search
GSGGGARKRRGRGANEGRREGRVLLADGSDVDNEESSAAENDDNVKGTDKGGKKTTPRTR
RGRGRGRGRHGGEEDEEDEDGTRRAGHRRNRNRRGRGRAAENEGNDSDGGAEKDRKNQTN
QKSKEDDGDEEDEKGGRSGKGKNEKKQDKKPDKKGKKEKANKKKKDKKKSASGSDSDSEE
EPITEEELAKLKEEVEEKKKLIATLRNKPWKMKKKLSVLKEAQLFVEKFEGALGKGKGKK
FYAYKVMMTKKWMKFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMI
LFGLTFGLVMVPEALMGKPYGSLPRKTVPRAEEATAMNFATLWDFSGFAQYSVLFYGYYN
NQRTIGWLKFRMPLSYFLVGVGTIGYSFMIVIRTMAKNANDDGGGDDTSFNFSWKMFTSW
DYLIGNPETADNKFASITTSFKEAIVEEQESRKEENIHLTRFLRVLANFLALCTLAGSGY
LIFFVVRRSQKFALEGLENYGWWERNEVNMVMSLLGMFCPTLFDVISSLENYHPRIALRW
QLGRIFALFLGNLYTFIIALMDEINLKLEEEKIVKYNMTIWEASLYNGTIPENSTAPPIE
VDPADVPRGPCWETMVGQEFVRLTVSDTMTTYITILIGDFLRAVFVRFFNYCWCWDLEYG
FPSYSEFDISGNVLGLIFNQGMIWMGSFYAPCLPAINVFRLHTSMYLQCWAVMCCNVPQE
RVFKASRSNNFYMAMLLFILFLSTLPAVYTIVSIPPSFDCGPFSGKTRMFEVISETLEHD
FPSWFGKVFGYASNPGLILPFILLMVLSIYYLNATSKSYKEANLELKKKLQSQAEENKRR
NKQKAQKSNEQDENPFETEPPQPKPKESKQDESTPKQDNKKGQDGNEVKKTGQPQEANSS
QALQPPGTALNGHYPPQSRGGNLPPPSIAVTRPPGPRGYGVPGYPPGNPRFPGVQPGIPR
GAPSYR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
ggaagcggtggtggagcgcgaaagaggcgaggacgaggtgcgaacgaggggaggcgagaa
ggacgcgtcctgctagcagatggcagtgatgttgacaatgaagaaagcagtgcagctgag
aatgacgataatgtcaaaggaacagataaaggagggaagaagacaacaccgagaaccaga
agggggcgtggcagagggagaggcagacatgggggtgaggaggatgaagaggatgaagat
gggacaaggagagctgggcatcgcaggaacagaaaccgcagaggacggggacgagcagct
gaaaatgagggcaatgattctgatggaggtgctgaaaaagacaggaagaaccagacaaat
cagaaatccaaggaagatgatggagatgaggaagatgagaaaggaggtagaagtgggaaa
ggcaaaaatgagaagaaacaggataaaaagcctgataagaaaggaaaaaaagagaaggcc
aacaagaagaaaaaagacaaaaagaaatcagcatctggctctgattctgactctgaggag
gagccaattacagaagaagaattggccaagctgaaagaagaggtagaagaaaaaaagaaa
ctaatcgccactctacgaaacaagccatggaagatgaagaagaagttgtctgtcctgaag
gaagcacagctttttgtggaaaagtttgaaggtgctcttggaaaaggaaaaggaaaaaaa
ttctacgcgtacaaagtgatgatgaccaaaaaatggatgaaatttcaaagagattttgaa
aattttaagacagcctgcataccctgggaaatgaaaattaaggagattgaaagtcacttt
ggctcatcagtggcatcttatttcatattcttgcgctggatgtatggaataaacatgatt
ctctttggactgacctttggacttgtaatggtgcctgaggctttgatggggaagccatac
ggctctttacccagaaaaactgtcccaagggctgaagaagcaactgctatgaactttgct
actctctgggattttagcggctttgcacagtattctgtactcttttatggttattacaat
aaccagaggacaattggatggctcaagttcaggatgcctctttcgtatttccttgttgga
gttgggactattggctacagctttatgattgtgattcgaacaatggcaaagaatgcaaat
gatgatggtggtggggatgacactagttttaatttcagctggaaaatgttcacaagctgg
gactacctcattggcaatccggagacagcagataataagtttgcctctatcacaacaagc
tttaaggaagcaatcgtggaggagcaggagagccgaaaagaggaaaatattcacttgact
cgattcctgagggttcttgccaacttcttagccctatgcacacttgctgggagtggctac
ctcatcttttttgttgtcagaagatcccagaaatttgccctggaaggtctggagaactac
gggtggtgggaaagaaatgaagtgaacatggttatgtcacttttgggaatgttctgtcca
actttatttgatgtaatcagttctctggaaaactaccaccctcgaatagctctaagatgg
caactgggacgaatctttgctctttttcttggcaatctctacactttcattattgcctta
atggatgaaatcaatctcaagttggaagaagagaagatagtcaagtataacatgaccata
tgggaagccagtctgtacaatggcactattccagaaaattcgactgctcctccaatagag
gtggacccagcagatgttcccagagggccatgctgggaaacaatggtaggacaggaattt
gtgcggctgactgtctctgacacaatgacaacatacatcacaattctaattggtgatttc
ttgagagctgtcttcgttaggtttttcaattactgctggtgctgggacttggagtatgga
tttccatcatattctgagtttgatataagcggaaatgtgctgggactgatctttaaccaa
ggcatgatctggatgggatctttttacgctccatgtctcccagcaatcaatgtgttccgc
ctccacacatccatgtacctgcagtgctgggcagtgatgtgctgcaatgtcccccaagag
agggtcttcaaagcttccagatccaataacttctacatggccatgttgcttttcatcctc
tttctctccacgctgcctgctgtgtacaccattgtctccatcccaccatcttttgactgc
ggtcctttcagtgggaagactagaatgtttgaagtcatatcagaaactctggaacatgac
tttccttcctggttcgggaaggtattcggttatgcctctaaccctggactcatcctgcct
tttatattgttgatggtcctgagtatttattatcttaatgctacatccaaatcctacaag
gaagctaacttggaacttaaaaagaagctacaaagtcaagcagaagaaaataaaagaaga
aataaacaaaaggcacaaaaatcaaatgaacaagatgaaaatccatttgagacagaacca
ccacagccaaagccaaaagaatccaagcaagatgaatcaactccaaaacaagacaacaag
aaaggtcaggatggtaatgaagtgaagaagacgggccagccacaagaagccaactcatct
caggcactccagcctccaggcactgccctgaatgggcactatcctccacagagcagagga
ggaaaccttcctcccccatccatagctgtgacaagaccaccaggccctaggggatatgga
gtgccgggctatccacctggaaacccacgcttcccgggggtgcagccaggaatacccagg
ggcgctcccagctacagataa
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