Cuculus canorus (common cuckoo): 104060590
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Entry
104060590 CDS
T08597
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cuca04515
]
104060590 (CLSTN1)
Cell adhesion molecules [BR:
cuca04515
]
Cadherins
Cadherin related
104060590 (CLSTN1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
CDC45
Laminin_G_3
Laminin_G_2
Glyco_hydro_16
EphA2_TM
V_ATPase_I
Toxin_R_bind_N
PFF1_TM
SID-1_RNA_chan
Cadherin_C_2
Neur_chan_memb
Zip
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
104060590
NCBI-ProteinID:
XP_053941501
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All DBs
Position
21:complement(4440319..4480959)
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AA seq
976 aa
AA seq
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MARSLPASCALRRLLLLLLLCGGAAAARVNKHKPWIETTYHGIVTENDNTVLLDPPLIAL
DKDAPLRFAESFEVTVTKEGEICGFKIHGQNIPFEAVVVDKSTGEGIIRSKEKLDCELQK
DYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKRYDSI
LKVEAVDADCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTVTAYDC
GKKRAAEDVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPSMRLETCDEPITSIQAT
VELETDHIGKGCDRDTYSEKSLHRLCGASSGTAELLPPPSSAANWTIGLPTDNGHDSDQV
FEFNGTQAVKIPDGVVTINLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYTLYV
HNCRLVFLFRQDPSEGKTYKPAEFHWKLNQVCDKDWHHYVLNVEFPAVTLYVDGVSYDPF
PVTEDYPLHPSKIETQLVVGACWQEYTGNENDNETVPETSAGGELRMAQFFRGNLAGLMI
RSGKLENKKVIDCLYTCKEGLDLQMADGVGKGVKIHMNPSQSTLTLEGDDIDRVDKAMQH
VSYLNSRQFPTPGIRRLKITTVVNCFNEEACVSIPSVEGYVMVLQPEEPKISLSGINHFA
RSASEFESSEGVALFPELRIISTITREVEPEGDGGEDPTVQESLVSEEIMHNLDTCEVTV
LGEELNQEQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMASYEEVLHLIRYRNWHTIS
LFDRKFKLVCSELNGRYVSNEFKVEVNVIHTANPVEHANHIAAQPQFVHPVHHTFVDLSG
HNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWD
DSALTITVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQEEDQQN
VNRQQQLEWDDSTLSY
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgatcgctgccggcctcctgcgcgctgcggcggctgctgctgctgctgctgctc
tgcggaggagctgcggccgccagagttaacaagcataagccatggattgaaactacctat
catggaattgtcactgaaaacgacaacacagtgcttttggaccctcctttaatagccctg
gacaaagatgcacctctgcgttttgcagagagttttgaggtgacagtcaccaaagaaggt
gagatttgtggatttaaaattcacgggcaaaacattccctttgaagcagtggtagtggat
aaatccactggtgagggaataatacgctctaaagaaaaacttgactgtgagctgcagaag
gactacacgttcaccatacaggcctacgactgcggaaagggaccagatggagcaaatgcc
aaaaaatcccacaaagcaacagtacatattcaggtgaacgatgttaatgagtacgcgcct
gtgttcaaagagaagtcgtacaaggcaacggttattgaagggaagaggtatgacagcatc
ctgaaagtggaagcagtggatgcggactgttcaccgcagttcagccagatttgcagttat
gaaattgtaactccggatgtaccttttgctattgacaaagatggttatataaaaaacaca
gaaaagttaaactacggtaaagaacaccagtataaactgacagtaacagcgtatgactgt
gggaagaagagagccgctgaggatgtcttggttaaaattagcattaagcctacatgcaag
cctggctggcaaggttggagcaaaagaatagaatatgagcctggtactggttctttagct
ctcttccccagtatgcgtttggagacatgtgatgagccaataacctcgattcaagcaaca
gttgagctagaaaccgaccatattggtaaaggctgtgatagagacacctactctgagaaa
tcccttcacaggctctgtggtgcatcttctggcacagctgagctgcttccgcctccaagt
agcgctgctaactggacaataggacttcctactgataatggtcatgacagtgaccaagtc
tttgaatttaatggcacacaagctgtgaagattccagatggtgttgtcacaatcaatcta
aaagagcctttcatgatttcagtgtggatgaggcatgggcctggaaccaaagagaaagag
acaattctgtgcaattcggacaagacagatatgaaccggcaccactacacgctctatgta
cacaactgccgccttgttttcctcttccgccaagatccttcagagggaaaaacatacaaa
cctgctgagtttcactggaaattaaatcaagtgtgcgataaagactggcatcattatgtc
ctcaatgttgaatttcctgcggtaactctttatgtagacggcgtttcatatgatcctttc
ccagtgactgaggattacccacttcatccttcaaagatagaaacacagctggtagttgga
gcatgttggcaagaatatacaggaaatgaaaatgacaatgaaactgtgcccgagacctct
gcaggtggtgaactccggatggctcagtttttccgaggcaatctggcaggtttgatgatt
cgttctggtaaactggaaaacaagaaagtgatagattgcctgtatacgtgcaaggaggga
ctggatttgcagatggctgatggcgttggcaaaggcgtgaagatccacatgaacccaagt
cagtcaacactgaccttagaaggggacgatattgacagagttgataaggccatgcagcac
gtttcctatctgaattcccgccagttcccaacacctggaattcggaggcttaaaatcacc
actgttgtcaactgtttcaatgaagaagcctgcgtctccattccttctgtggagggatat
gtaatggtcttgcagccagaggaaccgaaaatcagccttagtggcatcaaccattttgcc
cgctctgcttcagagtttgagagttctgagggtgttgccctcttccctgagcttcgcata
ataagcaccattacacgggaggtggagccagagggagatggaggtgaagatcctacagta
caagagtctttggtatctgaagagatcatgcataacctggatacgtgtgaggtgacagtg
ctaggagaagaactaaatcaggaacaagaaagcctggagattgacatgacacgattacag
cagaagggcattgagatgagtagttccaacttgggcatgataatcacaggggttgatact
atggctagttacgaagaagttttgcatttgatacgctacagaaactggcacaccatctct
ctctttgacagaaagttcaaattagtctgttctgagcttaatggccgctatgtcagcaat
gagtttaaagtggaggtgaacgttatccacacagctaacccagttgaacatgctaatcac
atagcagcacaaccacaatttgttcaccctgtgcaccatacgtttgttgatctctctggt
cacaacttagctaaccctcatccattttcagttgttccaagcacagccactgttgtgatt
gttgtttgtgtcagtttccttgtttttatgattattctgggcgtgttccggatccgagct
gcacatcagagaacaatgcgcgaccaggacactggaaaggaaaatgagatggattgggat
gactctgctttgaccatcactgtgaaccccatggagacttatgaggatcaacacagcagt
gaggaggaagaggaggaagaggaagaagaaagtgaagatggagaagaagatgacatcact
agcgcagagtctgaaagcagtgaggaggaagagggtgagcaggaggaggaccaacagaat
gtgaatagacagcaacagctggaatgggatgactcaaccctcagttattga
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