Cuculus canorus (common cuckoo): 104060723
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Entry
104060723 CDS
T08597
Symbol
PCARE
Name
(RefSeq) photoreceptor cilium actin regulator
KO
K24165
photoreceptor cilium actin regulator
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cuca03037
]
104060723 (PCARE)
04812 Cytoskeleton proteins [BR:
cuca04812
]
104060723 (PCARE)
Cilium and associated proteins [BR:
cuca03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104060723 (PCARE)
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
104060723 (PCARE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
104060723
NCBI-ProteinID:
XP_009560848
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All DBs
Position
3:70989111..71000225
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AA seq
1294 aa
AA seq
DB search
MGCTPSHSDIANTIAKSGLKALNKPKSILRIDPGDKGIPLLVKGSSCYSIDEFHQYGIQR
KDYLGEKEEQDKNDSLQFSSKAHSDPQISREERKIERAATDAEAVMSQLIDSQKHITEAI
QIRKQSSCESEALSFIWDDKNEGSANQIPKKGKKQKNKLAKQRRPSKIKEKSHLAPCETE
KKVDFPELLVRAHQSAYAYLNPNLSKYETILHVANQATQTQLFLQQMVSFLVLCFDEINQ
LLEEIANDGESLLKDVGGNLAWPAEKGDLKEHPDLLQQLLQYTVNKMQLLSGTLASLTSD
ALQETCSYLQSAASNLEGKLKAKQSFDERLLRMVRLLEASTVGSSQSHGDDRTLCSEDSG
IGVDSESLKEFSALTQHGGQASCDSCAHEHLSQKHSRTMDRVHDRTKSPCTPATHDCAFQ
RHFKDMFYSSMQGREATSSQGRVPEGISTMPQCASLSKSRSYNSFQSDSTQESEHFKICE
SIDFPDDDDDDEEESTLEEDDDNTSLSDMWKDTFPRRMSLPTVTENTQRQFIKRTENAET
EEIILKMKDAISEKIKFVPAKSGHKEWIEDEGGRAVLTTRPSTATGSQKTFRKQQRSRSE
ESLRSQAEDPTLLELQRTQKELSKRLEMFYGKKDTDDNPEPCKSRTAPYLLSEQVAMRSS
SKLKACLSKNFSILPNQDKVPSFKVDQNPANQLNEKRGGKPLRATVPTQETSGSKGKEPP
ATQNLSGSSCAPRQSVKKLIETFSPADDLVKDASFRSLGPIKCIRKFGLPVIPPTLPFQR
GLAHLNLKNRISPVEDENPSNTNGVSASFPNASPPEPVAELRKKDTKEETDEDIENLPPP
PPEMLMDTSFDSSEPEETARTERSSSEDAKKPIKTEFHTTKRAQVSPKMKASLQSIDLLP
SKNTSGPGGITNKGLRNTGSGDEKLQKYSLELNPTNVRIPSQEEILATQRKEAADLYKQT
HKIIPLQNPSGVSKPHSSSSERKEPSSPATSVQYQKRGSPDSLRRNEKGSALARKVSPTR
TPPPSPPVEKRLFIPPAHHRHSLQPLSNPQSSSPTMQRKPSPPTSPRVPTPPLQKKTPSP
PPQRKPLSPPAGHKQSSPTPYQLLGSPAYRRDASPPPFPIAPSPPASPSRSYKGSSAGLV
SGGEHQLSSSKRSSNLRSIFCPASSSLFEARSPLVPNEPAAEVTSQPEASLLSQKSNLLF
WQPGDRARKLSLSASSPQPFVRRSFSDRRPGVQFRLPAPVTASSDPALNQASMEESRRKA
GDSWSSPYIPEIRDSSRSASHPELYVVGQGLQRD
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcacaccctctcacagtgacattgctaatactattgcaaagagtggtcttaag
gctttgaataaacccaaaagtattttgcgtattgatccaggagataaaggaatcccactg
cttgttaaaggttcatcttgctacagtattgatgaattccaccaatatgggatccagagg
aaagactacctgggagaaaaggaagagcaggacaaaaatgatagtttgcagttttcttcc
aaggcacattcagatccccagatttccagggaagagaggaaaattgagagggcagccaca
gatgctgaagccgttatgtcccagctgattgactctcagaaacatattactgaggccata
cagatcagaaagcagagctcctgtgaatcagaagcattgtctttcatttgggatgacaag
aatgagggcagtgcaaatcaaatcccaaagaaagggaagaagcaaaaaaataagctggca
aagcaacgtcgacccagcaaaattaaagaaaagtcccatttggccccatgcgagacagag
aaaaaggtagatttcccagaactgcttgttagggctcatcagagtgcatatgcctactta
aatcccaacctctccaagtatgaaactatacttcatgtagccaaccaggccacccaaacc
cagctcttcctacagcagatggtaagctttctcgtgctttgctttgatgaaatcaaccag
ctcttggaagaaattgccaatgatggggaaagtcttctcaaagacgtaggtgggaatctg
gcctggccagcagagaaaggtgatttgaaggagcaccctgatcttttgcaacaactactg
cagtacacagtcaataagatgcagttactgagtgggacgctggcatccctcacgtctgat
gccctgcaggagacatgcagctacctgcagtctgctgcaagcaacttggaaggaaaactg
aaagcaaagcaaagctttgatgagcgcctgctccggatggtaaggctgcttgaagcctca
acagtgggatcctcacagtcccacggtgatgacaggactctctgttctgaggacagtggc
attggcgtggacagcgaatccctcaaggagttcagtgccctcacccagcatggaggacaa
gcaagctgtgattcctgtgcacatgaacatctgtcccaaaagcacagtagaacaatggac
cgcgtgcatgataggacaaagtcaccatgcacacctgccacccatgactgtgcatttcaa
aggcattttaaagatatgttttattcatccatgcagggtagggaagcaacttcttctcag
ggcagagtaccagaaggcatttctaccatgccccaatgtgcaagcttgagcaaaagccgc
tcctataactccttccagtctgactctactcaggaaagcgaacatttcaaaatctgtgaa
tcaatagattttcctgatgatgatgacgacgatgaagaagagagcactctggaggaggat
gacgacaacacaagtttatcagatatgtggaaggatacctttccaaggagaatgtctttg
cctacggtcactgaaaacacacaaaggcagttcatcaagaggacagagaatgcagagaca
gaggaaattattctgaagatgaaagatgccattagtgaaaaaatcaagtttgtcccggct
aaatctgggcataaagaatggatagaggacgagggtggaagagcagtcctaacaacaagg
cccagcacagcaacaggcagccagaaaaccttcaggaaacaacaacggtccaggtcagag
gagtctctcagaagccaggcagaggacccaaccctcctagagcttcagagaactcaaaaa
gaactcagcaaaaggctggaaatgttttatgggaagaaggatacagatgacaacccagag
ccttgcaaatcaagaacagcaccttatttactgagtgagcaagtcgccatgaggtcctct
agcaaactgaaagcatgcctctcaaagaacttcagtatcctgcccaaccaggataaagtc
ccttcattcaaggttgaccaaaatcctgccaatcagctgaatgaaaagagaggcgggaag
cctttaagagctactgtgcctacccaggagacttcaggaagcaaaggaaaggagcctcct
gcaacacagaatctcagtggcagcagctgtgccccccgacagtctgtcaaaaagctgatt
gaaactttcagtcctgctgatgatcttgtaaaagatgcatctttcagatccttaggacca
ataaagtgcatcagaaaattcggacttccagtcattccacccactcttccgtttcaaagg
ggcctggcacatttgaatcttaagaatcgtatctcaccagtagaagatgaaaacccttca
aacaccaatggagtttctgctagctttccaaatgcctctcctcctgaaccagttgcagaa
ttaaggaagaaggacacaaaggaagagactgatgaagacattgagaacctaccaccacca
ccacctgaaatgttaatggatacttcttttgactcatctgagcctgaagaaactgcaaga
acagaaagaagctcttcagaagatgctaaaaagcccatcaaaacagaatttcacactact
aagagagcacaagtttccccaaaaatgaaagcctcccttcagtcgatagacttactgcca
agtaaaaataccagtggccctggtggaatcactaataaaggtctaaggaatactggatca
ggggatgagaagctgcagaagtactctctggagctgaaccctaccaacgtgcgcatccct
agccaggaggagatactggccactcagagaaaagaggctgcggatttgtacaagcaaacc
cataaaattattcctcttcaaaatcccagtggggtttcaaaaccacacagcagcagctca
gagagaaaagagcccagttcacctgcgacatcagtgcagtaccagaagcgtggttctcct
gattcgctcaggagaaatgagaaaggctcagcacttgccaggaaagtctccccgacaaga
actcctcctccttctccaccagtggagaaaagacttttcatcccccctgcacaccacaga
cactctctgcagcctcttagtaacccacagtcaagctcacccaccatgcagaggaaaccc
agtccccccacaagtcccagggtgcccactccacccttgcagaagaagacgccctctccc
ccaccccagcgaaaaccactcagccctcctgcggggcacaaacaaagctcaccaacaccg
taccagctgctgggttccccagcctatcgtcgagatgcaagcccccctccgtttcccatt
gccccttctccaccagcatccccctcccgctcctacaaagggtcaagtgctgggcttgtt
tctggaggcgagcaccagctctcctcctccaagaggagcagcaacttacggtcgatattc
tgcccagccagttcttccttatttgaagccagatctccactggtacccaacgaacctgct
gcagaggtgaccagccagcctgaagcttcactgctttcacaaaagagcaacctgcttttc
tggcagcccggagaccgggccagaaagctgtctctgagtgcctccagtcctcagccgttt
gtgaggagaagtttctctgaccgccgaccaggagtccagtttcgtcttccagctcctgta
acagccagcagtgatcccgcacttaaccaagcaagcatggaggagagccgcagaaaagca
ggcgactcctggagcagcccttacatccccgaaatcagggactccagcagatctgcttcc
cacccagagctctacgtcgtgggccaggggctgcagagggactga
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