Cuculus canorus (common cuckoo): 104060828 Help Entry 104060828         CDS       T08597                                  Symbol PRPF6 Name (RefSeq) pre-mRNA-processing factor 6   KO K12855   pre-mRNA-processing factor 6 Organism cuca  Cuculus canorus (common cuckoo) Pathway cuca03040   Spliceosome Brite KEGG Orthology (KO) [BR:cuca00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104060828 (PRPF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cuca03041]     104060828 (PRPF6) Spliceosome [BR:cuca03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     104060828 (PRPF6)  Complex C    U5 SnRNP specific factors     104060828 (PRPF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PRP1_N TPR_14 TPR_19 HAT_PRP39_N TPR_16 Suf HAT_PRP39_C HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C TPR_17 TPR_2 TPR_8 FAT ARM_TT21_2nd TPR_CcmH_CycH TPR_1 T7SS_EccA1_N ARM_TT21_5th TPR_21 MUM1-like_PWWP Motif Other DBs NCBI-GeneID:  104060828 NCBI-ProteinID:  XP_053937679 LinkDB All DBs Position 16:9227096..9252167 Genome browser AA seq 941 aa AA seqDB search MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM KKNQTADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT PVPDSFFAKHLQSGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRK HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER ARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALRHYEDFPKLWMMKGQIEE QKELVEKAREAYNQGLKKCPHSIPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLW LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHD PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR CENAEPRHGELWCDVSKDIENWQKKIGEILVLVAAKLRNTF NT seq 2826 nt NT seq  +upstreamnt  +downstreamnt atgaacaagaagaagaagccgtttctgggcatgcccgcgcccctaggctacgtgccgggg ctgggccgaggagcgacaggtttcaccactcgctccgatatcggccctgcacgcgatgcc aacgaccctgtggacgaccgtcatgctccgccagggaagagaacagttggagatcagatg aaaaagaatcaaacggctgatgatgatgatgaggatttgaatgacaccaattacgatgag ttcaatggctacgctggcagcctgttctcaagcggtccctatgagaaagatgatgaggaa gcagatgctatttatgcagctttggataagaggatggatgaacgcaggaaagaaagaagg gaacaacgagagaaagaagaaatagaaaagtaccgtatggagcgacccaaaattcagcag cagttctcagacttgaaacggaagctggcagaggtgacagaagaagagtggctgagtatt ccagaagttggtgatgccaggaacaagcgtcagaggaaccctcgttacgagaagctgact ccggtacctgacagcttctttgcgaaacacttgcagtcgggggagaaccacacttctgtg gacccgcgccagacgcaatttggtggattgaatactccatatccggggggcttgaatact ccatacccaggaggaatgacaccaggcttaatgacacctgggacaggtgaattggatatg aggaagattggccaggccagaaacaccttgatggacatgaggctaagccaggtgtccgat tctgtgagcggccagactgtagtggacccgaaaggatatttgacagacttgaattccatg attcctacacatggaggagacatcaatgatatcaagaaggctcgtttgctcctgaagtct gtacgagagaccaatcctcaccatccaccagcctggatagcatcagcccgactggaggag gtcactggcaaactccaagtggctcgaaaccttatcatgaaagggacggagatgtgcccc aagagtgaagatgtttggttagaggctgctcggcttcagccaggagatacggccaaggct gttgtggcccaagctgtccgccaccttccacagtctgtccgaatctatatacgagcagca gagctggagacagatatccgtgcaaagaaacgcgttcttaggaaagccctcgagcatgtt ccaaattcggtgcgtttgtggaaagcggctgtggagttagaagaacctgaggatgccagg atcatgctgagtcgggctgtggagtgctgtccaacgagtgttgaactgtggcttgcgctg gcaaggctggagacatacgagaatgctcgtaaagtccttaacaaagcccgcgagaacatt ccaactgatcgtcacatctggattactgctgccaaactggaggaagccaatggaaacacc cagatggtggagaaaatcattgacagagccatcacatctcttagggctaatggtgtggaa atcaacagagagcagtggatacaggatgctgaggaatgtgataaagctggaagtgtggcc acatgccaggcaatcatgcgagctgtgattggcattgggattgaggaagaagatcggaaa catacctggatggaagacgctgacagttgtgtcgctcataacgctctggagtgtgcccga gccatttatgcttatgccttgcaagtcttcccgagcaagaagagtgtgtggctgcgggca gcatactttgaaaagaaccacggaacgagagaatccttggaggctcttttgcagagagct gttgctcactgtcccaaagcagaagtgctctggctcatgggagccaaatccaagtggctg gcaggagatgtgccagcagccagaagcattttggccttggctttccaggccaaccccaac agcgaggagatctggctggctgccgtgaagctcgagtcagaaaacaatgaatatgaaaga gcgagaaggctgctggcaaaagctcgcagcagtgcccccactgcaagggtcttcatgaag tctgtgaagctggaatgggtgcttgggaatattgctgcagcgcaggagctttgtgaggaa gccctgaggcactacgaggacttccccaaactgtggatgatgaagggacaaattgaggaa caaaaggagctggtagagaaagcacgggaggcatataaccaagggttgaaaaagtgtccc cattccatcccgctgtggcttttactgtccaggctggaggagaaagttgggcaattgact cgagcaagagccatcttggaaaagtctcgcctaaagaatccaaagaatcctgatctctgg ctggagtcggtgcgactagagtacagagctgggttaaagaatattgcaaataccctaatg gccaaggcactgcaggaatgccccaattcaggaatcctgtggtcagaggcaattttcctt gaagcacgaccgcaacgaaagaccaagagtgtggatgctctcaagaagtgtgaacatgac ccacatgtcttgttggctgtggccaagttgttctggagcgagcgtaaaataaccaaggcc cgagagtggttccaccgaacagtgaagattgactctgacctgggggatgcctgggctttc ttttacaaatttgagctccagcacggcacagaggaacaacaagaagaggtgaggaagcgc tgtgagaatgctgaacctcgccacggagagctctggtgtgatgtctccaaggacatcgag aattggcagaaaaagatcggagagattcttgtgctcgtggcggccaagcttagaaacacc ttctag

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