Cuculus canorus (common cuckoo): 104060837
Help
Entry
104060837 CDS
T08597
Symbol
CHRNA4
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4 isoform X2
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04080
Neuroactive ligand-receptor interaction
cuca04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104060837 (CHRNA4)
04082 Neuroactive ligand signaling
104060837 (CHRNA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104060837 (CHRNA4)
Ion channels [BR:
cuca04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
104060837 (CHRNA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
104060837
NCBI-ProteinID:
XP_009560978
LinkDB
All DBs
Position
16:9896815..9916889
Genome browser
AA seq
624 aa
AA seq
DB search
MGFLVSKGNLLLLLCASIFPAFGHVETRAHAEERLLKKLFSGYNKWSRPVANISDVVLVR
FGLSIAQLIDVDEKNQMMTTNVWVKQEWHDYKLRWDPQEYENVTSIRIPSELIWRPDIVL
YNNADGDFAVTHLTKAHLFYDGRIKWMPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYD
KAKIDLVSMHSHVDQLDYWESGEWVIINAVGNYNSKKYECCTEIYPDITYSFIIRRLPLF
YTINLIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPL
IGEYLLFTMIFVTLSIIITVFVLNVHHRSPRTHTMPDWVRRIFLDIVPRLLFMKRPSTVK
DNCKKLIESMHKITNTPRLWSETDLEPNFTTSSSPSPQSNEPSPTSSFCAHLEEPVKPQP
ICKSPSEQYSVLHPEPVQVTCSSPQPSCHPLSDTQTTSISKGRSISVQQMYSPHKAEEGS
IRCRSRSIQYCYLQEDSSQTNGQSTGSPASQRCQLNEEQPQYKPPQCKCKCKKSEAAGKP
VQGSKSHSAKEQHLLLMSPAMKLAVEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFL
WMFVIVCLLGTVGLFLPPWLAGMI
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgggatttctcgtgtctaaaggaaacctcctcctcctgctgtgtgccagcatcttcccc
gccttcggccacgtggaaacccgagctcacgcggaggaacgtctactgaagaaactcttc
tccggttataataagtggtcccgccccgttgccaacatttctgatgtggtccttgtccgc
ttcggcttgtccattgcccagctcatcgatgttgatgagaaaaatcaaatgatgacaacg
aatgtctgggtgaagcaggagtggcatgactacaagctacgctgggacccccaagagtat
gaaaatgtcacatccatccgaatcccctcagagctgatctggaggccagacattgtcctc
tacaacaatgccgacggtgactttgcagtcacccacctgaccaaggcccacctcttctat
gatgggagaattaaatggatgccacctgctatctataaaagctcctgcagcatcgatgtt
accttcttcccctttgaccagcaaaactgcacaatgaagtttggctcatggacgtatgac
aaagccaaaatagacttggtgagcatgcacagtcatgtggaccagctggactactgggag
agtggggaatgggtcatcatcaacgctgtgggcaactacaacagcaagaaatatgaatgc
tgcacagagatctaccctgatataacttattccttcattatccggaggctgccactgttc
tacacaatcaatctgatcatcccctgcctgctcatctcctgcctgactgttctggtcttc
tacctgccctccgagtgtggggagaagataaccttgtgcatctctgtgctgctgtccctc
actgtatttctgctgctcatcacagagatcatcccatctacctccttggtcatccccctg
attggagagtatcttctcttcaccatgatatttgttaccttgtctatcatcatcactgtc
tttgtgctcaacgtgcaccatcgttccccacgtacacacacgatgcctgactgggtgagg
aggatctttcttgacattgttccacgcctcctcttcatgaaacgtccctccacagtcaaa
gacaattgcaagaagctcattgaatccatgcacaaaataaccaatacgccaaggctttgg
tctgagactgacctggagcccaacttcactacctcatcttcccccagcccccagagtaat
gagccatcacccacatcttccttctgtgcccaccttgaggagccagtcaagcctcagcct
atctgcaaatccccttctgagcagtactcagtcctgcacccagagcctgtacaggtgacc
tgttcctctccacaaccctcatgccaccccctgagtgacacccagaccacctctatctca
aaaggccgatcaataagtgttcagcagatgtacagcccccataaggcagaggaagggagt
atccgttgtaggtcccggagcatccagtattgctacctgcaagaggactcgtcccagacc
aatggccaatccactggctctccagcatcccagcggtgccagctaaatgaagagcagcca
caatacaaacctcctcagtgcaagtgtaaatgcaaaaaaagcgaggcagctggcaaacca
gttcaaggaagcaagagtcacagcgccaaagagcaacatctcctgttgatgtccccagct
atgaagctggcagtggaaggggtgcactacatcgcagaccacctgcgagcagaagatgcg
gatttctcagtgaaggaagactggaagtacgttgcaatggtcatcgacaggatcttcctc
tggatgttcgtcattgtgtgcttgctaggcactgttggtctcttcctcccaccatggctg
gcaggaatgatctaa
DBGET
integrated database retrieval system
