Cuculus canorus (common cuckoo): 104060889
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Entry
104060889 CDS
T08597
Symbol
RTEL1
Name
(RefSeq) regulator of telomere elongation helicase 1 isoform X1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuca03032
]
104060889 (RTEL1)
Enzymes [BR:
cuca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104060889 (RTEL1)
DNA replication proteins [BR:
cuca03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104060889 (RTEL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
ARCH_RTEL1
Helicase_C_2
HHD_RTEL1
ResIII
DEAD
zf-UDP
C1_2
Motif
Other DBs
NCBI-GeneID:
104060889
NCBI-ProteinID:
XP_053937109
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All DBs
Position
16:8881745..8925311
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AA seq
1305 aa
AA seq
DB search
MPRITLNGITVEFPFQPYACQEAYMSKVLECLQRKVNGILESPTGTGKTLCLLCSTLAWR
EHFKDTISARKIAQRMNGVELFPERPMSSWGNAATDADIPAYYTDVPKIIYASRTHSQLT
QVINELKNTVYRPKVCVLGSREQLCIHPEVKRQESNHMQIYMCRMKVMAHACHFYNNVEE
KSTEKELIGSIMDIEDLVKNGNKHRACPYYLSRSLKQQADIIFMPYNYLLDSKSRRAHNL
DLKGTVVILDEAHNVEKLCEESSSFDLTPYDLASAMDAINVVLEEQAKVVQQNEINAEFN
MEMASSGLNMELEDIAKIKKMLLQLENAIDAVELPPNDSGVTKEGSYIFDLFAEAQITFQ
TKSSLLESLEQILHFLSGRSGVFVNTSGLHKLSDIIQTVFSIDPPEGTTGFMPHQSISKY
YKVHIHLDDSNQKKKQRTDLWNSSSSKKQGKTLSYWCFSPGYSMHELVRQGVRTIILTSG
TLSPLSSFTMEMQIPFPVCLENPHVIDKHQLWVGIIPKGPDGAVLTSTYERRFSEDYLSS
LGKTIGNLVRVVPHGLLVFFPSYPVMDKSLEYWREHDFAKRIEEVKPMFVEPRNKGSFTE
VIDAYYDKVVCPKSNGAAFLAVCRGKASEGLDFADINGRGVIITGLPFPPRMEPRVVLKM
QFLDEMRKSSAGAQYLSGREWYSQQASRAVNQAIGRVIRHRQDYGAIFLCDHRFTTGDVR
GKLPSWVRPYVSVYDNFGHAVRSVSLFFRIAQEIMPPPLPQCPSASAGSLGESNMAPSTS
SEQTFSLKKAKNLDDHVPSLKRKRKVNGDGTSSLCMEYEQELVLPRKQRVGLLDALEHNE
KSREDAEEDNNLVGEEKAQRLSTLSLQYEKRLTDEQKGGRRKIKLVSNTQADKKADPTEP
KKARATLYIATVKKTLSQQNYDLFSKALQHYKKTDDFHEMLSQMSSLFIEDEKKHVLLRE
FYQFVRPQHKKDFDEACCSLTGMGCGYKPEHSLLPQEREILARKIEEKRSQQKTAFSEAS
CAQLNAELHLNQGGLHLMTGLHSAGQNTSQASRKDMEKASCSRRDSHQALRAAYLHDVKK
ALNKSTYSRFYEALLAYKKTDNYDAMISVIAALTTERPEDFHLLQRFYMFVRPHHKEQFK
EMCKNLTGMACGTGEKQLEQQVQDEGNPLGLESSCAQGENCCTADAATSKGEAPQKIQKK
ISSFCFSQQSTLESSTTKASGETSNVRAPTSPGAVPVFPLEMEPECGRFQCSNCRSEDDV
PFKCPLCDFTCCKTCWEQFLKTVKKCPKCHSDIKKQRLIQVFFWS
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggataacgctgaatggcatcacagtggagttcccgttccagccctacgcctgc
caggaagcctacatgtccaaggtgctggagtgtctgcaacggaaggtaaatggcattttg
gagagccctaccggcacaggaaagaccctctgcctgctgtgttccactctggcatggcgg
gaacacttcaaagacactatctcagcccgcaaaatcgcacagcgtatgaatggagtggag
ctctttcctgagagacccatgtcatcctggggtaacgctgccacggatgctgatattcca
gcttattacactgatgttcccaaaataatttatgcctccagaactcactcacaactcacg
caggtgattaatgaattgaagaacactgtctacaggccgaaggtatgtgtgttgggttcc
agagagcagctttgcatccatcctgaagtgaagcggcaggagagcaaccacatgcagatc
tatatgtgccggatgaaggtgatggctcatgcttgtcatttctataacaatgtggaagaa
aagagtacagagaaagaactgattgggtcgatcatggatattgaagacttggttaaaaat
ggaaacaagcacagagcttgtccttattatctctctcgaagcctgaagcagcaagcagat
attatttttatgccatacaactatttactagactccaagagccggcgagcgcacaaccta
gacttgaaggggactgtggtcatacttgatgaagctcacaatgttgagaagttgtgtgag
gagtcatcatcttttgacttgacaccctacgatttggcttcagccatggatgctataaat
gtcgtactggaagaacaagccaaagtggttcaacagaatgaaataaatgctgagttcaac
atggagatggccagttcagggctgaacatggaacttgaagatatagcaaagataaagaaa
atgcttcttcagctggaaaatgctattgatgcagtggagctgccaccgaacgatagtgga
gtcaccaaagaaggaagctacatctttgatttgtttgccgaagcccaaataacattccag
accaaatcctcactcctggagtctcttgagcagattttacatttcctctcgggccgctca
ggggtatttgtcaatacatctggattgcataaactctcagatattatccagacagtgttc
agcattgatccaccagaaggcacgacaggcttcatgccccatcagtcgatatcgaaatat
tataaggtgcacattcatctggatgacagtaatcagaagaagaaacaaaggacggatctc
tggaattcatcatcttcaaaaaaacaaggaaagaccttaagctactggtgtttcagccca
ggatacagcatgcatgagcttgttcgacagggagtcaggacaattatccttactagtggg
actctctcgccactctcatcatttacaatggaaatgcagatcccttttcctgtttgcttg
gagaatcctcatgttattgataaacaccagctctgggttgggatcattcctaagggccct
gatggagctgtgcttacttctacctatgaaagaaggttttcagaggattatttgtcttct
ctggggaaaacaattggtaaccttgtgcgagttgtaccccatggactgctggtattcttc
ccttcctatcctgtcatggataagagcctggaatattggagagagcacgatttcgctaaa
agaatagaagaagtgaagccaatgtttgtggagcccaggaacaaaggaagctttacagag
gtaatagatgcatactacgataaagttgtctgtccgaagtccaatggagctgcttttctg
gcagtgtgccgggggaaggccagtgaaggcttggactttgcagacataaatgggcgagga
gtaatcattactgggcttccgtttcctcctcgcatggagcccagagttgttttaaagatg
cagttcctggatgagatgaggaaaagcagtgcaggtgcacagtatttatctgggcgtgag
tggtacagccagcaagcttctcgggctgttaatcaggctatcggcagggtcatcaggcat
cgccaggactacggggcaatcttcctatgtgatcacaggttcacaactggagatgtcaga
ggcaaactgccttcttgggtccgcccttatgtcagtgtttatgacaactttgggcacgca
gtcagaagtgtctcgctcttcttccggattgctcaagaaattatgcccccacccctgcca
cagtgcccgtctgcctctgctggttccctcggggaaagcaatatggcaccatctacatca
tctgagcagaccttctctctgaaaaaagccaaaaacttggatgaccacgttcccagtttg
aagaggaagagaaaggtaaatggagatggaacatcgagcctgtgcatggagtatgaacaa
gagttggtcttgcctagaaaacagcgtgttgggctcttggatgcgttggagcacaatgag
aaaagcagggaagacgcagaggaagacaataacttggtgggagaggaaaaggcacaacgt
ctgtctacactttcccttcagtatgagaagaggttaacagatgagcagaaaggaggaagg
agaaaaataaagctagtcagcaatacgcaagctgataagaaagcagacccgacggagcca
aagaaggcccgagctacattgtacattgccactgtgaagaagaccctaagccaacagaat
tatgatctcttctctaaggctcttcagcactacaagaagacagatgacttccatgagatg
ttatctcaaatgagctctctctttatagaggatgaaaagaagcatgtcttgttacgagaa
ttctaccagttcgttcgacctcaacataaaaaggatttcgatgaagcgtgttgcagtctg
acaggcatgggctgtggctacaaacccgagcacagcctcctgccacaagagagggagata
ctagccaggaaaatagaagaaaaacggagtcagcagaaaactgcgttctcagaggcctcg
tgtgctcaactaaatgccgagctccacttgaaccagggaggattacacctgatgacagga
ctgcacagtgcagggcagaataccagccaagcttcaaggaaagacatggaaaaagcttca
tgctctaggagagattcccaccaggccctccgcgctgcgtatctccatgacgtgaagaag
gcgttgaacaaaagcacttacagccgtttctatgaagcgttgttggcttacaagaagaca
gataactatgatgcgatgatatccgtgatagcagcactcaccactgagaggccggaagac
tttcatctcctacaaaggttttacatgtttgtgcgccctcatcacaaagagcagttcaaa
gaaatgtgtaaaaatttgactggaatggcttgtggcacgggagagaagcaactggaacag
caggtgcaagatgaagggaaccctctgggtctggagagctcgtgcgctcaaggagagaac
tgctgcacagcagatgcagccacttctaagggtgaggcaccgcagaaaattcagaagaag
atttcttccttctgcttcagccagcagagcacactggaatcgtcaacaaccaaagcgtca
ggagaaaccagtaatgtgagagcacccacaagccctggagctgtgcctgtctttcctctg
gagatggagccagagtgcggaagattccagtgctctaactgcagatctgaggatgatgtg
ccttttaaatgtccgttatgtgacttcacttgctgcaaaacatgctgggagcagttctta
aagacggtgaagaagtgtccgaagtgccacagtgatatcaaaaagcaacgattaatccaa
gttttcttctggtcgtaa
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