KEGG   Cuculus canorus (common cuckoo): 104060900
Entry
104060900         CDS       T08597                                 
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain isoform X1
  KO
K24357  collagen type XX alpha
Organism
cuca  Cuculus canorus (common cuckoo)
SSDB
Motif
Pfam: fn3 VWA Collagen Pur_ac_phosph_N Ig_DSCAM-DSCAML_C VWA_2 DUF4998 CBM_4_9
Other DBs
NCBI-GeneID: 104060900
NCBI-ProteinID: XP_053937803
LinkDB
Position
16:complement(9924474..9974427)
AA seq 1473 aa
MLICTCFFFACLPVMSHVWGRGGQGSGRLKLTVLSEDRLQMKWKETEGDINGYKVRVKPM
AGDSEQEVMLKTKTPKATVGGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELKNASQTR
NNRRNSETASGKNLTSSGSPAAEHSRVTEATPPPLNAVLTQPAKDRAEKKRQKGTQAKGS
GEPTRNQPSVEAGVTEGTPTATRSSKHTPAHSERESLGKEKPTKDSWRRGSQFQCDTSTM
TDIVFLVDGSWSIGRNNFKLIKEFLSNLISPFSIAQDKIRVGLSQYSSDPRTEWDLSAYS
TREQVLEAVKNLRYKGGNTFTGLALTHVLEQNLRPDAGARLEAEKLVILLTDGKSQDDAN
LAAQTLKNLGIEIFAIGVKNADEAELKQVASEPLDLTVYNVLDFPLLSSLVGKLTRVLCT
KIKEKSNKEKAGSTVKDIPVNTGSQLSPTDLKISSVTSKSMHLTWSPPLRPPKKYRIVYY
PSKGGIPKEVVLDGAVSSLQLSNLTSHTEYLVSVFPIYDTAVGDGLRGVTSTLPLSSPRS
LRVSELSHNSIRLSWKAAQGATQYLVLCSAAPDGSEDYTTEVKVAQPEVLLEGLSPSTEY
SVAVYAMYGEDASDPASIQETTLALSPPRYLSFSELSHASVRVSWEAASPAVKAHRVSYV
SSRGSNAEEVEVPGTAASAVLRPLSSLTQYFISVRSKYDDGDSFPITGNVTTLKVPPPRA
LKVTELSGNSLRLQWEAVAASDVVVYQIKWSTVSGEKPQELSIAGNVATAVLPGLQKNTD
YKISIWAYYKDGARSDMVSVQHRTNSRSPPTNLFLDSESPTSLQVHWTPPDGRIQHYKIT
YSPVSDAGAQQTIMASGKSSSVTLQSLLPDRAYKVTISAIHYTGESESISITGRTAPVSS
KFPSIRGFVPSKTEACPTISSTQGSVRGFDMMEAFGLVEKEYASINGVAMEPFIFSGSRT
FTLFRDTQLTLRTSDVHLFAIPPEHTISILLRLLPETPKEPFAVWQITDEDFQPLLGVNL
DPSKKSLTYFNHDYKADLQEVSFDQQEVKKIFYGSFHKVHVAVSHFKIKLYLDCKKIAEK
PINTVGSISTAGFIMLGKVTRTRGPRSGSASFQLQSLQIMCSSIGAEEDRCCDLPALRDE
ETCPALAPACSCTSGRPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQTGPKGPSG
QQGSPGSQGITVQGPVGPPGIKGEKGDTGSPGMQGIPGMQGAPGKDGLQGAKGVRGLEGT
AGPPGPPGPRGFQGVTGSRGNSGEKGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLVS
QACERMIQTHVLKFDSFIHEHSRKPVPIWEERLKPGEPGPPGPPGPPGSNGERGEKGIPG
QPGKDGYPGERGAPGPKGEKGMPGASEEGMQGPRGRTGPPGEVVLGKPGPKGYPGNAGPS
GFPGVRGQPGQPGYPGGCDISGCYEAGRRDFIP
NT seq 4422 nt   +upstreamnt  +downstreamnt
atgctgatttgcacttgtttcttttttgcctgcctgcctgtgatgagccatgtctgggga
cgaggaggccaagggtcaggccggctgaagctcactgtcctttcagaagacagactgcaa
atgaagtggaaagagactgaaggggacatcaacggctacaaagttcgagtaaagcccatg
gcaggggactcggagcaagaagtcatgctgaaaaccaaaactcccaaagccacagtgggg
gggctgagccctaccaaggaatacacgctgcaggtctatgtgctcaacggctcccaggaa
gccctgtttgccaagaggaaatttgtgatagaagagctaaaaaatgcatctcagactaga
aataaccgaagaaactcagaaactgcatcaggaaagaatctcacctcttcggggagtcca
gcagctgagcacagcagggtgacagaggccaccccaccacctctgaatgccgtcttgaca
cagccagcaaaggacagagctgaaaagaaaagacagaaggggactcaggcaaagggctca
ggagaacccacaagaaaccagcccagtgtggaggccggtgtgacagaaggaacgccaaca
gccacaagatcatccaagcacactcctgcacactcggagcgagagtctctaggaaaagaa
aaacccacaaaggattcatggaggagaggttcccagtttcagtgtgacacatctacaatg
actgatattgtctttcttgtggatggatcttggagcatcggacgcaacaatttcaaactc
ataaaggagttcctgagcaacttgatttccccattcagtattgcccaagacaagataaga
gtagggctgtcccagtacagcagcgatccccgcacagagtgggacctgagcgcttactct
accagggagcaggtgctggaggctgtgaagaatttgcggtacaagggaggcaacaccttc
acaggtctggccctgacccatgtcctggagcagaatttgagaccagatgctggtgcccgg
ctggaggctgagaaactggtaatcctcctgactgatggaaaatcccaggatgatgccaac
ctggctgctcagacgctgaaaaacctgggtatagagatatttgccattggggtgaagaac
gcagatgaggcagagctgaagcaggtggcctcagagccgctggatctcactgtgtacaac
gttctggatttcccactgctgagctctctggttggcaagctcaccagggtcctgtgcacc
aagattaaggaaaagagcaacaaggaaaaagcaggcagcactgtgaaagatatcccagtg
aacacaggttcgcagttgagcccaactgaccttaaaatatcctctgtgacctctaagagc
atgcacttgacctggagtcctcctctgagaccaccaaagaaatatcggattgtttattat
ccatctaagggtggcatccccaaagaggtggttttagatggagcagtgtcgtctttgcag
ctttccaatttgacctcacacacagagtatctcgtatcggtgtttcctatttatgacaca
gccgttggggatgggctgagaggcgtcacctccacactgcctttgtcttcccctcgctcc
ctgcgtgtctccgagctgagccacaacagcatcaggctgagctggaaggcagcccaggga
gccacgcagtacctggtgctctgctctgcagcccctgatggatcagaagactatacgaca
gaggtgaaggtggcccagcctgaggtccttctggaagggctgtcgcccagcacggagtac
tctgttgcagtgtacgcgatgtatggggaagatgcgagcgatccagccagcatccaggaa
accaccctggccttgagtcctcccagatacctgagcttctccgagctcagccacgcgtcc
gttcgagtcagctgggaggctgcatctccggctgtgaaggctcaccgtgtctcctatgtt
tctagcagagggagcaatgctgaggaggtggaggttcctggcactgcagcatccgctgtc
ctgagacctttgtcctctctcacccagtacttcatcagtgtccgatctaagtatgatgac
ggagactcctttccaattactggcaacgttaccaccctaaaggtccccccaccacgtgca
ctgaaggtcactgagctctccgggaacagcctccgactgcaatgggaagctgtcgctgcc
tctgatgtggttgtctatcagatcaagtggagcacagtcagtggagagaagcctcaggag
ctctccattgctggaaacgtggcaactgctgtcctgccaggcttgcagaagaacactgac
tataaaatatccatctgggcctattacaaagatggtgctcgaagtgacatggtttctgtt
cagcacaggacaaattcccggagccctcccaccaacctcttccttgactctgagagcccc
accagcctccaagtccactggacccctcctgatggccgcatacagcactacaagatcacc
tacagccccgtttctgatgctggtgctcagcaaacaatcatggcttctggcaaaagcagc
agtgtgaccctgcagtcgctgctgcccgatcgagcctacaaggtgaccatatctgccatc
cactatacgggagagagcgagagcatatccataactggacggacggctcctgtgtcctct
aaattcccttcaatacgaggattcgttccatctaaaacagaggcctgccccaccatcagc
tctacccaaggctccgtacgaggatttgatatgatggaagcttttggcttagtagagaaa
gaatacgcctccattaacggcgtagctatggagccattcatcttcagcggttcccgtacc
ttcaccctgttcagagacactcagctcaccctgaggaccagtgatgtccacctctttgca
atcccacccgagcacaccatcagcatcctcctgcgcctgctgcccgagacccccaaagag
cccttcgctgtgtggcaaataacagatgaggacttccagcccctccttggcgttaacctt
gaccccagtaagaaatccttgacctatttcaatcacgactacaaggctgatttgcaggaa
gtttcctttgaccagcaggaagtgaagaagatattctatgggagctttcataaggtgcac
gtggccgtgagccacttcaagatcaaactctatctggactgtaagaaaatagcagagaag
cctatcaacaccgtcggcagcatctccaccgctggcttcatcatgctgggcaaggtgaca
aggaccagaggacccaggagtgggtctgcatcgttccagctgcagtctttgcagatcatg
tgcagcagcataggggcggaggaagacagatgctgtgatctccctgcattgagggacgag
gagacctgtcctgccttagctcctgcctgctcttgtacttctggccggccgggcttgcca
ggacctccagggccccctggcagccctgggaggagaggccctcaaggggagcagggggag
ccaggacccaagggtgaaccaggcccacctggacaaacagggccaaagggtcctagtggc
caacaaggctctccaggttcccaaggaatcacggttcagggtcctgtgggaccaccagga
attaaaggagagaaaggagacactggaagtcctggcatgcagggcattcctggcatgcag
ggagctccaggcaaggatggtcttcaaggtgcaaagggcgtgaggggactagaaggcaca
gctgggcctccaggacctcctggaccaaggggtttccaaggagtgacaggctcccgaggc
aacagcggggagaagggacctccaggtgatgttgggccaacaggtctgccgggtcctaaa
ggagaacgaggagagaaaggggaaccgcagtctctggccacaatttaccagctcgttagc
caggcttgtgagcggatgattcagactcatgtgttgaaatttgactcattcattcatgaa
cattcaaggaaaccagttcctatttgggaagaaagattaaaaccaggggaaccaggacca
ccaggtcctccaggtccacctgggagcaatggagaaagaggagaaaaaggcatccctggg
cagccaggcaaagatgggtatcctggagaaagaggtgccccagggcccaagggagaaaaa
gggatgcctggagccagtgaggaagggatgcaaggacccagaggaagaacaggcccacca
ggagaagtcgtactggggaagccaggtccaaagggttatcctgggaatgccggtccttca
ggttttcctggtgtcagagggcaacctggacagcctggatatccagggggttgtgatatc
tctggatgttatgaggcaggtagaagagatttcatcccctga

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