Cuculus canorus (common cuckoo): 104060903
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Entry
104060903 CDS
T08597
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104060903 (SMARCAD1)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104060903 (SMARCAD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
DEAD
HDA2-3
ERCC3_RAD25_C
HHH_3
Paramyxo_C
Motif
Other DBs
NCBI-GeneID:
104060903
NCBI-ProteinID:
XP_053921226
LinkDB
All DBs
Position
4
Genome browser
AA seq
1036 aa
AA seq
DB search
MSLFNLDRFRFERKRRISDRDTVSPSAAQVLAAARSTAAACSAAGGEEDELTDDSSRPDT
PVLNVTAVTEYSTIPETPEHKRASEQSYFKRRRVQLLDVSSESEDEPRNFSAAKENGTSK
GDVIVISEESDDDDDDDAQHGNELTQLAYVNGGDQLSATENGVEDDIRDAKLQTLKELFP
QISDKELLQLIESTRTMDEAIAAGLKFNDEGASRKRKLEDCPTNGKTGNEQVPKKTKLDS
LDESEPQRQWERQEVLVKKLQNAFPGLDKEELREVLQEHNWVFHEALEALRVFAENDQGM
AFPAKSGASNCTKASTKSRSDESKEKLTQKSSVKVQNGSQKKDKIKRSFWSTKRETEETE
DESASEGGGSSLDEDYSSGGEVMEDRYKVKILSFLQDASPSELTLIPQCSQKKAQKIIAL
RPFNSWESLFAKMTQTVGLSEDIVWNCKILLKERDVVLKLMNKCEEISNKLTRQVTRITE
QGGCGWNIDQPVILNRSLELKPYQKIGLNWLALLHKHRLNGILADEMGLGKTIQAIAFLA
YLYQGGDQGPHLIVVPASTLDNWIREVRLWCPELNVLFYYGSQEDRKHLRMDINNKVVDF
NVIVTTYNCAISSPEDRGLFRRLKLNYAIFDEGHMLKNMSSVRYQHLMTINAKNRLLLTG
TPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSAEEQSIYEKERIAHAKQIIKP
FILRRVKDEVLKQLPPKKDIIELCPMSEKQEQLYCDLLNKLKKSINGNEKNSDMGNVMMQ
LRKMANHPLLHRQYYTTDKLRKMSMLMLKEPTHCDANPDLIFEDMTVMTDFELHLLCKQY
SHVSDFKLDMDQILDSGKFRALERILSDLKEKGDRVVLFSQFTMMLDILEVFLNHWQHRY
IRLDGKTQISDRIHLIDQFNTDMGIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDK
QAEDRCHRVGQTREVKVIKLISSGTIEESMLKISQQKLKLEQDMTAADSGKSLAYNDVHL
SELKLLQYIILKKQGY
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttcaacctagaccgctttcgctttgagaggaagaggagaatctctgaccgg
gacaccgtgtctccttcggcagcccaggtgctggcagcagctaggtctactgctgctgca
tgttctgctgctggaggggaggaggatgaacttacagatgatagcagcaggccagatact
ccagttctgaatgtgacggcggtgactgagtactccaccatcccagaaactcctgaacac
aagagggcaagtgaacaatcttatttcaagcgtcgaagagtacagttgctagatgtgtct
tcagagagcgaagacgaaccaagaaacttcagcgctgcaaaagaaaatggaacttcaaaa
ggagatgtgattgtgatctctgaagagtctgatgatgatgatgatgatgatgcacagcat
ggaaatgaactaacccagctggcgtatgtaaatggtggggatcagctgtcagctacggag
aatggtgtagaggatgacatcagagatgcaaagctgcaaacactgaaggaactttttccc
cagataagtgacaaagaattactacagttgatagaatcaacacgcacgatggatgaagca
atagctgctggtttaaagttcaatgatgaaggtgcctctcgtaaaaggaaactagaagat
tgtcccacaaatggcaaaactggaaatgagcaagtcccaaaaaagacaaaacttgattca
ctagatgagtcagaaccccaaaggcaatgggaaaggcaagaagttcttgtgaagaagctg
caaaatgcattccctggattggataaggaggaactgagagaagtacttcaggagcataac
tgggtgtttcatgaagcgttggaggccctgagagtatttgcagaaaacgatcagggcatg
gcatttcctgccaaaagtggagcgtctaactgtaccaaagcctccaccaagagcagaagt
gacgagagtaaagagaagctgacacagaagtcttcagtgaaagtacagaatggctctcag
aaaaaggacaaaatcaaaaggagcttttggagtactaaaagagaaacagaagagactgag
gatgaatcagcttctgaaggcggtggtagctcccttgatgaggactacagtagtggtggt
gaagtgatggaggatcgctacaaagtgaaaatcctcagcttcctgcaagatgcttcccca
agcgaactgactttgattccccagtgttctcagaaaaaggctcagaagataatagcactc
cggccctttaacagctgggagtctctgtttgcaaaaatgactcagactgttggtttgtca
gaagacatagtgtggaactgcaagatactgctgaaggagagggacgtggttttaaagctc
atgaataaatgtgaagagatttcaaataaactgacaagacaagtaaccaggattactgaa
caaggaggatgtggatggaacatagaccaacctgtcattctgaatcggagtttggaactc
aagccataccagaagattggtttgaactggttagcactgctgcacaaacacagattgaat
ggcatattggctgatgaaatgggcttaggaaaaacaattcaagccattgcatttctagct
tatctctaccaagggggcgaccagggtccccatttgatagttgtgccagcttcaacgtta
gataactggataagagaagttcgcctgtggtgtcctgaactgaatgtcctcttttactat
ggatctcaagaggatcggaaacatctcagaatggacattaataataaagttgttgatttc
aatgtgattgtaactacatataactgtgcaattagcagcccagaggatcgaggactgttt
cgcaggttgaagcttaactacgcaatttttgatgaaggtcatatgctcaagaacatgagc
tctgtacgctaccagcaccttatgacaattaatgcaaagaatcgtctattgctaacaggg
actccagttcaaaataatctgttggaattgatgtccctcttgaattttgtcatgccacat
atgttcagcagtagcacaagtgaaatccgaaggatgttttcttcaaaaacaaagagtgct
gaagagcagagtatatatgaaaaggagaggattgcacatgcaaagcagataataaaaccg
ttcatcttgagaagagtaaaagatgaggttcttaaacaactgcctcccaaaaaagatatt
attgaattatgtcccatgtctgagaaacaggaacaactatactgtgatctcttaaacaag
ctcaagaaatctattaatggtaacgagaagaactctgacatgggaaatgtaatgatgcaa
cttagaaaaatggctaatcaccctctcttgcaccgtcagtattacacgactgacaagctc
aggaaaatgtccatgcttatgcttaaggaacccacacattgcgatgcaaaccctgacctt
atctttgaagacatgacagtaatgacagattttgagctgcatttgctttgtaagcaatat
tctcatgtcagtgacttcaagttagacatggatcagatcttggattctgggaagtttaga
gcactggaacgcattctctccgaccttaaagagaagggcgacagagttgtattgtttagc
cagtttactatgatgctggatatcttggaagttttcctaaatcattggcaacatagatat
attaggttggatggaaaaacacagatttctgatcggatacatctaatagatcagttcaat
acagatatgggtatatttgtattccttctgtcaaccaaagctggtggcttgggaattaat
ctgacctcagcaaatgttgttattcttcatgacattgattgcaacccatacaacgataag
caagcagaagaccgatgccatagagtaggtcagacaagagaagtgaaagtcataaagcta
atcagtagcggaactattgaagaatccatgctgaaaatcagccagcagaaattgaagtta
gaacaagatatgactgcagcagattcaggtaagtctcttgcatataatgatgtccactta
agtgagttaaagttgctgcagtatattattctgaaaaagcaaggttattga
DBGET
integrated database retrieval system
